Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073274
CDS Infomation

pacid=37429146 polypeptide=PGSC0003DMP400049563 locus=PGSC0003DMG400028472 ID=PGSC0003DMT400073274.v4.03 annot-version=v4.03
Sequence

ATGACTCCAACATTAGTTTATCTAAGTGTTGTTTCCATATTTTTCCTTCAATCCTTGGTT
ATATTTGCAAGTTATGAAAAGAACAAAGAGATTTACATTGTACATCTAGACTTACCTGAT
GAAAGTCAATTTTTCTCTAATTTTGAAGATTTGCATGATTGGCACCATTCATTTTTGCCC
TCAAACACAGACAATTCTTCCTCTTCGCGTATGGTTTACTCCTATCGCAATGTCCTCAAT
GGCTTTGCTGCAATGCTAACACCAGAAGAAGTAACATTACTTCAAGACAAGGAGGGGATT
ATATCAGTCCGGTCACGACAATTACTGGATGCACAAACCACTCATAGTACAAATTTCTTG
GGGCTACACCAGAACTTAGGCTTCTGGGAAAAATCAAATTATGGAAAAGGTATGATAATT
GGAGTTTTAGACAGTGGAATAACGCCTGATCATCCATCCTTCCATGATGAAGGAGTGGCC
CCTCCACCTGCTAGGTGGAAGGGCAAGTGTGAGTTCAACTTTACGGTGTGTAACAACAAA
CTCATTGGAGCAAGATATTTCCATGAATTTGGTAATGGGACGCCACTAGATGAAAATGGT
CATGGTACACATACTTCAAGCACTGCTGCTGGAAATTTTGTGGATGGGGCCAACTTTTTA
GGCCTGGCTAGTGGCACAGCATCTGGTATGGCTCCGCTTGCACACGTTGCCATGTATAAA
GTCTGCAATGCTAGTCTTATTTGTTCTGAAAGTGATATATTGGCTGCGATTGATGCTGCA
ATTGAGGATGGAGTTGATGTATTATCATTTTCCATTGGAAAAAATTCTACCAATTTTTGG
TCAGAGGTTGTTGCACTTGGTGGATTTACTGCTATGCAGAAGGGGATTCTCGTCAGCTGC
TCAGCTGGCAATGCAGGTCCCATACCAGGCTCTGTGTTTAATGGAGCTCCATGGCTTCTC
ACTGTTGGTGCAAGTACTACTGATAGAAAACTAAGAGCGACAATACGTCTTGGAGATGGC
AAAGAAATTAATGGGGAGTCAGCTTTCCAGCCCAAAGACTTCTCCGAGACCCCATTACCA
CTCATTTTTCCTGGAACAAATATCAGTGATCCGACTGCTGCATTTTGCAATGCAGAGTCA
CTGAAGAATATTGATGTCAAAGGAAAAGTTGTGTTGTGTATATCTGGTGGTAAGATTACT
AGAATTGGCAAGGGAAGTTTCGTGAAGGATGCTGGAGGTGCTGGAATGATACTCATGAAT
AGTGAACCCTTGGGGTTCACTATCTTAGCTGATCCACATGTTCTTCCAGCAGCACATGTC
AGCTATGCAGATGGACTAAAGATCAAAGCCTACATCAATTCAACATCAAAACCTCAGGCC
ACATTTTTATTCAAGGGAACCATATTTGGAGATGATCATGCTCCAGCAGTTGCTGGCTTT
TCAGGCAGAGGCCCAAACTTGGCAAGTCCTGGCATCTTGAAACCAGATATTATTGGTCCT
GGTGTTAACATTCTTGCTGCATGGCCAAAATCCATTGAGAACAATAACGACACAAAATCT
ACTTTTAACCTTTTATCTGGCACCTCAATGTCTTGTCCTCATGTATCTGGAATTGCAACA
TTAGTAAAGAGTGCACACCCTGATTGGTCTCCAGCTGCTATCAAATCAGCAATCATGACG
ACTGCTGATCTTGTGAACCTCGGTGAAAAACCAATTGAGGATGAAAGGGGTGTTCCTGAT
GACTTCTTTGCCACTGGTGCAGGACATGTTAATCCGTTAAGAGCAAGTGATCCAGGCTTA
ATCTATGACATTCAACCTGAGGATTATGTTCCTTACTTATGTGGCTTAAACTACTCAAAC
AGAGCAGTTAGTATGTTTGTATTGAGAAAAGTGAACTGCTCATCAGCCATTCCTGAAGCA
GAACTAAATTATCCTTCCTTTTCAATTGCACTTGGATTAGAAGCTCAAACATATACGAGG
ACTGTGACTAATGTTGGTGAAGCTGTCTTGTCTTATGTTGTGGAGATTGTGCCACCACAA
GGAGTTGATGTGAGAGTTGACCCTCCTCTATTGAATTTCTCCGAGTTGAACCAGAAGAAA
ACATATCAAGTAACATTTAGCCGATCAAGTACTTCAACCATCAATGCCACTTTTGTTCAA
GGATACTTGAGATGGACTTCATCCAAGCACTTCGTTAGGAGCCCAATTGTAGTTACCTTA
GAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049563
PEP Infomation

pacid=37429146 transcript=PGSC0003DMT400073274 locus=PGSC0003DMG400028472 ID=PGSC0003DMT400073274.v4.03 annot-version=v4.03
Sequence

MTPTLVYLSVVSIFFLQSLVIFASYEKNKEIYIVHLDLPDESQFFSNFEDLHDWHHSFLP
SNTDNSSSSRMVYSYRNVLNGFAAMLTPEEVTLLQDKEGIISVRSRQLLDAQTTHSTNFL
GLHQNLGFWEKSNYGKGMIIGVLDSGITPDHPSFHDEGVAPPPARWKGKCEFNFTVCNNK
LIGARYFHEFGNGTPLDENGHGTHTSSTAAGNFVDGANFLGLASGTASGMAPLAHVAMYK
VCNASLICSESDILAAIDAAIEDGVDVLSFSIGKNSTNFWSEVVALGGFTAMQKGILVSC
SAGNAGPIPGSVFNGAPWLLTVGASTTDRKLRATIRLGDGKEINGESAFQPKDFSETPLP
LIFPGTNISDPTAAFCNAESLKNIDVKGKVVLCISGGKITRIGKGSFVKDAGGAGMILMN
SEPLGFTILADPHVLPAAHVSYADGLKIKAYINSTSKPQATFLFKGTIFGDDHAPAVAGF
SGRGPNLASPGILKPDIIGPGVNILAAWPKSIENNNDTKSTFNLLSGTSMSCPHVSGIAT
LVKSAHPDWSPAAIKSAIMTTADLVNLGEKPIEDERGVPDDFFATGAGHVNPLRASDPGL
IYDIQPEDYVPYLCGLNYSNRAVSMFVLRKVNCSSAIPEAELNYPSFSIALGLEAQTYTR
TVTNVGEAVLSYVVEIVPPQGVDVRVDPPLLNFSELNQKKTYQVTFSRSSTSTINATFVQ
GYLRWTSSKHFVRSPIVVTLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400073274
Transcript Infomation

pacid=37429146 locus=PGSC0003DMG400028472 ID=PGSC0003DMT400073274.v4.03 annot-version=v4.03
Sequence

ATGACTCCAACATTAGTTTATCTAAGTGTTGTTTCCATATTTTTCCTTCAATCCTTGGTT
ATATTTGCAAGTTATGAAAAGAACAAAGAGATTTACATTGTACATCTAGACTTACCTGAT
GAAAGTCAATTTTTCTCTAATTTTGAAGATTTGCATGATTGGCACCATTCATTTTTGCCC
TCAAACACAGACAATTCTTCCTCTTCGCGTATGGTTTACTCCTATCGCAATGTCCTCAAT
GGCTTTGCTGCAATGCTAACACCAGAAGAAGTAACATTACTTCAAGACAAGGAGGGGATT
ATATCAGTCCGGTCACGACAATTACTGGATGCACAAACCACTCATAGTACAAATTTCTTG
GGGCTACACCAGAACTTAGGCTTCTGGGAAAAATCAAATTATGGAAAAGGTATGATAATT
GGAGTTTTAGACAGTGGAATAACGCCTGATCATCCATCCTTCCATGATGAAGGAGTGGCC
CCTCCACCTGCTAGGTGGAAGGGCAAGTGTGAGTTCAACTTTACGGTGTGTAACAACAAA
CTCATTGGAGCAAGATATTTCCATGAATTTGGTAATGGGACGCCACTAGATGAAAATGGT
CATGGTACACATACTTCAAGCACTGCTGCTGGAAATTTTGTGGATGGGGCCAACTTTTTA
GGCCTGGCTAGTGGCACAGCATCTGGTATGGCTCCGCTTGCACACGTTGCCATGTATAAA
GTCTGCAATGCTAGTCTTATTTGTTCTGAAAGTGATATATTGGCTGCGATTGATGCTGCA
ATTGAGGATGGAGTTGATGTATTATCATTTTCCATTGGAAAAAATTCTACCAATTTTTGG
TCAGAGGTTGTTGCACTTGGTGGATTTACTGCTATGCAGAAGGGGATTCTCGTCAGCTGC
TCAGCTGGCAATGCAGGTCCCATACCAGGCTCTGTGTTTAATGGAGCTCCATGGCTTCTC
ACTGTTGGTGCAAGTACTACTGATAGAAAACTAAGAGCGACAATACGTCTTGGAGATGGC
AAAGAAATTAATGGGGAGTCAGCTTTCCAGCCCAAAGACTTCTCCGAGACCCCATTACCA
CTCATTTTTCCTGGAACAAATATCAGTGATCCGACTGCTGCATTTTGCAATGCAGAGTCA
CTGAAGAATATTGATGTCAAAGGAAAAGTTGTGTTGTGTATATCTGGTGGTAAGATTACT
AGAATTGGCAAGGGAAGTTTCGTGAAGGATGCTGGAGGTGCTGGAATGATACTCATGAAT
AGTGAACCCTTGGGGTTCACTATCTTAGCTGATCCACATGTTCTTCCAGCAGCACATGTC
AGCTATGCAGATGGACTAAAGATCAAAGCCTACATCAATTCAACATCAAAACCTCAGGCC
ACATTTTTATTCAAGGGAACCATATTTGGAGATGATCATGCTCCAGCAGTTGCTGGCTTT
TCAGGCAGAGGCCCAAACTTGGCAAGTCCTGGCATCTTGAAACCAGATATTATTGGTCCT
GGTGTTAACATTCTTGCTGCATGGCCAAAATCCATTGAGAACAATAACGACACAAAATCT
ACTTTTAACCTTTTATCTGGCACCTCAATGTCTTGTCCTCATGTATCTGGAATTGCAACA
TTAGTAAAGAGTGCACACCCTGATTGGTCTCCAGCTGCTATCAAATCAGCAATCATGACG
ACTGCTGATCTTGTGAACCTCGGTGAAAAACCAATTGAGGATGAAAGGGGTGTTCCTGAT
GACTTCTTTGCCACTGGTGCAGGACATGTTAATCCGTTAAGAGCAAGTGATCCAGGCTTA
ATCTATGACATTCAACCTGAGGATTATGTTCCTTACTTATGTGGCTTAAACTACTCAAAC
AGAGCAGTTAGTATGTTTGTATTGAGAAAAGTGAACTGCTCATCAGCCATTCCTGAAGCA
GAACTAAATTATCCTTCCTTTTCAATTGCACTTGGATTAGAAGCTCAAACATATACGAGG
ACTGTGACTAATGTTGGTGAAGCTGTCTTGTCTTATGTTGTGGAGATTGTGCCACCACAA
GGAGTTGATGTGAGAGTTGACCCTCCTCTATTGAATTTCTCCGAGTTGAACCAGAAGAAA
ACATATCAAGTAACATTTAGCCGATCAAGTACTTCAACCATCAATGCCACTTTTGTTCAA
GGATACTTGAGATGGACTTCATCCAAGCACTTCGTTAGGAGCCCAATTGTAGTTACCTTA
GAGTAG