Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073267
CDS Infomation

pacid=37427564 polypeptide=PGSC0003DMP400049560 locus=PGSC0003DMG400028469 ID=PGSC0003DMT400073267.v4.03 annot-version=v4.03
Sequence

ATGGATGGTAGATTCAATAACTTTTTTGTTTCTGAGCAAGAAGATTCCGAGAATTCACCG
GAAAACAGCTCCGATTCACCGCGTTCCGGTTTGTTCAATGATAACAAGATGATGACTTCA
ACTTCGTCCCCTAAAAGAAGCAGAAGATCCATAGAAAAAAGAGTGGTGTCAGTGCCAATT
AAAGAAGTTGAAGGATCAAAAATGAAAGGTGAAATAAGTATGCCACCATCTGATTCTTGG
GCATGGAGAAAATATGGACAAAAGCCCATCAAAGGTTCCCCTTATCCCAGGGGATATTAT
AGATGTAGTAGTTCAAAAGGATGTCCAGCTAGAAAACAAGTTGAAAGGAGCCGTGCGGAC
CCAAACATGTTAGTTGTGACATATTCTTGTGAACATAACCATCCTTGGCCGGCTTCTAGA
AATAATCAACACAACCATCGTACATCATGTATTATTAATAATAATACAAAGACGAAGATG
AAAACAATAGCATCACTAACAACAACAACAATAATAGCATCAACGACTATTTCTGATATC
GCGGTTTCAAAAGAAAAGATCACAAGTGATTTCACCCGTCCATCGGAGCCTAATTCGGAC
GAAAAATTTGTCAATCTCAGTGAATCATCATCGTCCCTTATTAGTGCAAATGAATTCGGA
TGGTTTTCCGATTTAATTGAGTGTACTTCAACTACTATGCTAGAAAGTCCAATTTTGACC
GAAGTTGACTGTGATATTGACATGTCATCAACGTTGACAATGCGAGAGGAAGACGTGTCA
CTTTTCGCCGATCTCGGAGAGTTGCCGGAATGTTCAACAGTGTTTGGCCGTGGAATGATG
GAGAGAGATGAGGAACGTCGTCGACTTAGCTTGACACCTTGGTGTGGTACTACAGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049560
PEP Infomation

pacid=37427564 transcript=PGSC0003DMT400073267 locus=PGSC0003DMG400028469 ID=PGSC0003DMT400073267.v4.03 annot-version=v4.03
Sequence

MDGRFNNFFVSEQEDSENSPENSSDSPRSGLFNDNKMMTSTSSPKRSRRSIEKRVVSVPI
KEVEGSKMKGEISMPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRAD
PNMLVVTYSCEHNHPWPASRNNQHNHRTSCIINNNTKTKMKTIASLTTTTIIASTTISDI
AVSKEKITSDFTRPSEPNSDEKFVNLSESSSSLISANEFGWFSDLIECTSTTMLESPILT
EVDCDIDMSSTLTMREEDVSLFADLGELPECSTVFGRGMMERDEERRRLSLTPWCGTTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400073267
Transcript Infomation

pacid=37427564 locus=PGSC0003DMG400028469 ID=PGSC0003DMT400073267.v4.03 annot-version=v4.03
Sequence

ATGGATGGTAGATTCAATAACTTTTTTGTTTCTGAGCAAGAAGATTCCGAGAATTCACCG
GAAAACAGCTCCGATTCACCGCGTTCCGGTTTGTTCAATGATAACAAGATGATGACTTCA
ACTTCGTCCCCTAAAAGAAGCAGAAGATCCATAGAAAAAAGAGTGGTGTCAGTGCCAATT
AAAGAAGTTGAAGGATCAAAAATGAAAGGTGAAATAAGTATGCCACCATCTGATTCTTGG
GCATGGAGAAAATATGGACAAAAGCCCATCAAAGGTTCCCCTTATCCCAGGGGATATTAT
AGATGTAGTAGTTCAAAAGGATGTCCAGCTAGAAAACAAGTTGAAAGGAGCCGTGCGGAC
CCAAACATGTTAGTTGTGACATATTCTTGTGAACATAACCATCCTTGGCCGGCTTCTAGA
AATAATCAACACAACCATCGTACATCATGTATTATTAATAATAATACAAAGACGAAGATG
AAAACAATAGCATCACTAACAACAACAACAATAATAGCATCAACGACTATTTCTGATATC
GCGGTTTCAAAAGAAAAGATCACAAGTGATTTCACCCGTCCATCGGAGCCTAATTCGGAC
GAAAAATTTGTCAATCTCAGTGAATCATCATCGTCCCTTATTAGTGCAAATGAATTCGGA
TGGTTTTCCGATTTAATTGAGTGTACTTCAACTACTATGCTAGAAAGTCCAATTTTGACC
GAAGTTGACTGTGATATTGACATGTCATCAACGTTGACAATGCGAGAGGAAGACGTGTCA
CTTTTCGCCGATCTCGGAGAGTTGCCGGAATGTTCAACAGTGTTTGGCCGTGGAATGATG
GAGAGAGATGAGGAACGTCGTCGACTTAGCTTGACACCTTGGTGTGGTACTACAGGCTAA