Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073263
CDS Infomation

pacid=37424888 polypeptide=PGSC0003DMP400049556 locus=PGSC0003DMG400028467 ID=PGSC0003DMT400073263.v4.03 annot-version=v4.03
Sequence

ATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATG
GGGCGTGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTT
GATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGA
ATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGA
TGGAGTTTTAGTTGGGATGAGGATTCATTGTTGTTGCACATAAAAGATGGGTTGCCAGAT
GATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGAT
GATGTTTCACAGTTGCTGCTGGATAGGTTTAAATGTGTTCCTGCTTTTCTCCCTCCAGAC
ATTTTATCTAAATATTATCATGGTTTTTGCAAACAGCATTTATGGCCACTTTTCCATTAT
ATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATAT
GTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGAT
TATGTCTGGATCCATGATTATCATTTAATGGTTCTACCTACATTCTTGCGGAGGCGTTTT
AATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTTCCTTCATCAGAGATATATAGG
ACTCTTCCAGTGAGAGAAGAAATTCTCAAGGCCCTACTGAATTCCGATCTGATTGGTTTC
CATACATTTGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAG
TATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTACGGACGGATGGTGGGGATCAAG
ATTATGCCAGTTGGGATTCACATGGGACGGATTGAAACTGTGCTTCAACTAGCAGATAAA
GAGTCAAGAGTTGGAGAACTTAAGCAACAGTTTGAAGGTAAAACTGTTTTACTTGGTGTT
GATGATATGGACATTTTCAAAGGTGTCAATTTGAAACTTCTCGCATTGGAGGAAATGTTA
AAACAACATCCTAAGTGGCAAAGAAGGGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGA
GGAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAACCGTCAAAAGAATC
AATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCT
CTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACAGCAGTAAGA
GATGGCATGAACCTTACACCATATGAATACATTGTGTGTAGGCAGGGCATCCCTGGTTCA
GACTGCACTGCAGAGTCCAATGATTTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATT
GGATGTTCTCCTTCACTAAGTGGTGCTATACGTGTTAACCCATGGAATGTGGAAGCAACT
GCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTACGCCATGAG
AAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAG
GATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGTCTGAGC
TTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATCGACTCTATT
GTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTC
ATGCCTCAAACAGCAATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTGTTAACTCA
CTTTGTGGTGATGAAAGAAATACCGTGTTTCTCGTGAGTGGACGAGGAAGGGATAGTTTA
GGCCAGTGGTTTTCTCCGTGTGAGAAGCTTGGCATTGCTGCGGAACATGGATACTTCTTA
AGGTGGTCTGCAGATAAAGAATGGGAAGTAGTTGGGCAGAACAACGATTTTCAGTGGATG
CAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAA
ACAAAAGAGAGTGCTCTTGTTTGGCATCATCGAGATGCAGATCTTGGTTTTGGGTCTTGC
CAAGCAAAAGAGATGTTAGACCATCTTGAGAGTGTGCTTGCAAATGAGCCTGTTGCTGTG
AAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAGGGAGTCAGTAAAGGTCTAGTTGCA
GAGAAAATTTTCGCAACAATGGCTGAGAGTGGCCGGCAGGCTGATTTCGTGCTGTGCGTA
GGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGT
ATACTCTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCC
AAATATTATCTTGATGACACAACAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAA
TCCATTCCTCCTTCATCAGACATTGTAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400049556
PEP Infomation

pacid=37424888 transcript=PGSC0003DMT400073263 locus=PGSC0003DMG400028467 ID=PGSC0003DMT400073263.v4.03 annot-version=v4.03
Sequence

MMSKSYTNLLDLASGNFPVMGREKKRLPRVMTVAGVISELDDDQANSVTSDVPSSIIVDR
IIIVANQLPVKAKRRSDNKGWSFSWDEDSLLLHIKDGLPDDMEVLYVGSLKVEVDSSEQD
DVSQLLLDRFKCVPAFLPPDILSKYYHGFCKQHLWPLFHYMLPYSASHGSRFDRSWWEAY
VAANKIFSQKVIEVINPEDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYR
TLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRMVGIK
IMPVGIHMGRIETVLQLADKESRVGELKQQFEGKTVLLGVDDMDIFKGVNLKLLALEEML
KQHPKWQRRAVLVQIANPARGKGKDIEEIQEEIQTTVKRINDKFRQPGYEPIVFIDRPVS
LSERTAYYSVAECVVVTAVRDGMNLTPYEYIVCRQGIPGSDCTAESNDLKSSMLVVSEFI
GCSPSLSGAIRVNPWNVEATAEALNEAISMADGEKVLRHEKHYKYVSTHDVAYWSRSFFQ
DLERSCRDHFRRRCWGIGLSFGFRVVALDPNFKKLSIDSIVSAYSRAKNRAILLDYDGTL
MPQTAINKVPSPEVISIVNSLCGDERNTVFLVSGRGRDSLGQWFSPCEKLGIAAEHGYFL
RWSADKEWEVVGQNNDFQWMQIAEPVMKQYTEATDGSSIETKESALVWHHRDADLGFGSC
QAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFATMAESGRQADFVLCV
GDDRSDEDMFEIIGNAINSGILSSSTEVYACTVGQKPSKAKYYLDDTTEVRTMLHALAEE
SIPPSSDIVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400073263
Transcript Infomation

pacid=37424888 locus=PGSC0003DMG400028467 ID=PGSC0003DMT400073263.v4.03 annot-version=v4.03
Sequence

ATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATG
GGGCGTGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTT
GATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGA
ATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGA
TGGAGTTTTAGTTGGGATGAGGATTCATTGTTGTTGCACATAAAAGATGGGTTGCCAGAT
GATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGAT
GATGTTTCACAGTTGCTGCTGGATAGGTTTAAATGTGTTCCTGCTTTTCTCCCTCCAGAC
ATTTTATCTAAATATTATCATGGTTTTTGCAAACAGCATTTATGGCCACTTTTCCATTAT
ATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATAT
GTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGAT
TATGTCTGGATCCATGATTATCATTTAATGGTTCTACCTACATTCTTGCGGAGGCGTTTT
AATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTTCCTTCATCAGAGATATATAGG
ACTCTTCCAGTGAGAGAAGAAATTCTCAAGGCCCTACTGAATTCCGATCTGATTGGTTTC
CATACATTTGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAG
TATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTACGGACGGATGGTGGGGATCAAG
ATTATGCCAGTTGGGATTCACATGGGACGGATTGAAACTGTGCTTCAACTAGCAGATAAA
GAGTCAAGAGTTGGAGAACTTAAGCAACAGTTTGAAGGTAAAACTGTTTTACTTGGTGTT
GATGATATGGACATTTTCAAAGGTGTCAATTTGAAACTTCTCGCATTGGAGGAAATGTTA
AAACAACATCCTAAGTGGCAAAGAAGGGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGA
GGAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAACCGTCAAAAGAATC
AATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCT
CTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACAGCAGTAAGA
GATGGCATGAACCTTACACCATATGAATACATTGTGTGTAGGCAGGGCATCCCTGGTTCA
GACTGCACTGCAGAGTCCAATGATTTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATT
GGATGTTCTCCTTCACTAAGTGGTGCTATACGTGTTAACCCATGGAATGTGGAAGCAACT
GCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTACGCCATGAG
AAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAG
GATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGTCTGAGC
TTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATCGACTCTATT
GTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTC
ATGCCTCAAACAGCAATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTGTTAACTCA
CTTTGTGGTGATGAAAGAAATACCGTGTTTCTCGTGAGTGGACGAGGAAGGGATAGTTTA
GGCCAGTGGTTTTCTCCGTGTGAGAAGCTTGGCATTGCTGCGGAACATGGATACTTCTTA
AGGTGGTCTGCAGATAAAGAATGGGAAGTAGTTGGGCAGAACAACGATTTTCAGTGGATG
CAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAA
ACAAAAGAGAGTGCTCTTGTTTGGCATCATCGAGATGCAGATCTTGGTTTTGGGTCTTGC
CAAGCAAAAGAGATGTTAGACCATCTTGAGAGTGTGCTTGCAAATGAGCCTGTTGCTGTG
AAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAGGGAGTCAGTAAAGGTCTAGTTGCA
GAGAAAATTTTCGCAACAATGGCTGAGAGTGGCCGGCAGGCTGATTTCGTGCTGTGCGTA
GGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGT
ATACTCTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCC
AAATATTATCTTGATGACACAACAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAA
TCCATTCCTCCTTCATCAGACATTGTAACATGA