Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073255
CDS Infomation

pacid=37425311 polypeptide=PGSC0003DMP400049551 locus=PGSC0003DMG400028463 ID=PGSC0003DMT400073255.v4.03 annot-version=v4.03
Sequence

ATGACCAGGGCTGTTCGTGACCGGATTCTTAAGGATGCAAATGGAAACATTAGTGATCAC
TTACGAAATCACATACATTTGACAAATTGTATTCATTTGAAGAACCACATGCATAAGCAT
AGCCCCATTTTGGCTGATAGGTCCCTTATGAGGGACCTTGTTGTCCTTCAGAGGTCAAGG
TCCTTAAGAGATCCTTCTGCAAGTCCACCCTCATGGCAATCTCCTTCGGTTGTCGATGCC
CTTCTTAAAAGAAGTGAAAGGGATGCTGTTATGAGCAATGGTAGGCGGTCTGTAGGCATA
GATCGACCTAGGGATGGTATAGGTTTATCTGGAAACTCGCCTCCTTTAGCTGCCCGATCG
TCGTCTAGAGTGGCTTCTGCAGAGATTAACAAGCATAATACTGAGCGAATGGCAGGGGCT
CCAAGTGATCGAAGTAGCAAGAGTGGAGTTCGCGAACGGAGGAGAGTCAGGAGAGAAGAA
TCAAGCCGTAGGAATCTGGGAACTGACTTCATTGCTGAAAAGGATGAGTGTTCGGATGAT
GGAAATGATTTGGTCCGCAATCCTGTTTCAGAGAACTCCGAACAAAAAGGTAGAATTAGC
AATGAAACAGAGAGGCAGAGGCATGATGATCGAATAAGGACCCTCTCTGAGCAATTAAAT
GATGTTCCAATTGACAGTGATGGGGTAGCTTCTTCTCACATTCATGCTCGTGGAAGGCAT
ACTCATAATGAGAAAATTGCAGAGCAAATGGAGGCAACAACTCGTGGCAATGGCAGAGTA
AAACGGCGTAAGTTTCGAGGGGCAAGAAGAACTCGCACTTCTGTTCCTTCAAGAGATGCT
CTTGCCCACAATGAAATGTCTGTGGCCTCAAATTCATTAGGTCAAGCTTCAGCACACCAA
AAATATCCTGCAGAAGATGGCTATGAAGAGTATGTCAACCAGAATGTAACAAGAGATCCA
AGGAATGGGTGCGGAATTCCTTGGAACTGGTCAAGGATTCATCATAGAGGAAAATCATTT
CTTGACATGGCTGGCAAGAGTTTATCTTGTGGTTTGTCTGACCCAAGGTCAAAAAGAAGT
GGTGGTGGTCCAACAGGGAGGGATGCTGCTGATATGCCAATAATGTCTGAATACTCGAGC
TCATCTAGTAAATCTGAAGCAGAGGCGTTGCCCTTACTATTTGATCCTTCAAATTCTCAG
GGCAGTTCAGACCATCCTGCTTGGGTTCATGATTATTCGGGGGAGTTGGGTATCTATGCT
GACAATTTACTAAAGCAAGAACTTGACTCGGATCTTGCTTCAGAAGCTAGATCAGGTGAG
CAACGCAAATTTCGTAGGCATGGCAATAGTAGGCACCAGAGTCTAACACAAAAGTATATG
CCAAGAACATTCCGGGATTTGGTAGGACAGAATTTAGTTGCGCAAGCTCTTTCAAATGCT
GCTCTTAAGAGAAAAGTTGGCTTGCTTTATGTTTTCTATGGGCCTCATGGAACAGGAAAG
ACCTCATGTGCCCGCATTTTTGCAAGGGCATTAAATTGCCAATCCATTGAGCATCCCAAG
CCTTGTGGTTTTTGTGATTCTTGCATTGCACATGATATGGGAAGGAGTCGAAATATAAGG
GAAATAGGTCCTGTGAGTAATTTTGATTTCGAGAATATGATGGATCTTCTTGATAATATG
ATTGTCTCCAAACTACCATCCCAGTATAGGGTTTTTATATTTGATGATTGTGACACACTG
TCTCCTGATTGTTGGAGTGCTATTCTAAAGGTCATCGATAGAGCTCCTAGGCGAGTTGTT
TTCATCCTTGTATCCTCAAGTCTTGATGTCTTGCCTCATATAATCATATCTAGGTGCCAG
AAATTCTTTTTTCCCAAGTTGAAGGATGCAGATATCATCTATACTTTGCAATGGATTGCA
ACCAAGGAAGATCTTGAAATCGAAAGGGATGCACTCAAGCTTATTGCATCAAGATCAGAT
GGATCGTTGAGAGATGCTGAAATGACTCTTGAGCAATTGAGTTTGCTTGGCCAGAGAATC
TCTGTCCCTCTTGTTCAGGAGCTGGTTGGACTTATTTCCGATGAGAAATTAGTGGACTTA
CTTGACTTGGCATTATCTGCTGACACTGTCAATACAGTGAAACATTTGAGGGATATCATG
GAATCTGGTGTTGAACCCTTAGCTTTAATGTCACAACTTGCTACAGTCATAACTGATATA
CTTGCTGGGAGCTATGACTTCACAAAAGAAAGGCCTCGGAGGAAGTTCTTTCGACGCCAA
GCAATATCAAAACAAGATATGGAAAAACTGCGTCAAGCTCTGAAAACACTATCTGAAGCT
GAAAAGCAGCTGAGAATGTCAAATGACAGACTTACCTGGCTTACAGCTGCATTGCTGCAA
CTCGCTCCAGATCAGCAGTATATGTTGCCCAATTCCTCAGCAGACACTAGTTTTATTCAA
AGTCCACTAGGCTTGAATAATGCAGGGGGAACAGAAAGACCCAGGAAAAGCAATGTTGAG
CATGCTGATGACATGCTACACAAAGACAGAGGGTTCCCATCAAAAAGTAGGGTAGAAAAC
TTTCAAGCTGGATGTTCTAGTAATATTTACTCCGACGCCAGGGTGAAAGGGGTTCGCATT
GGTGGAAAAGGGCATAATGGAGCTGGAGTACTTACTCAAAAAGCTTATAGCATCTCTAGT
GACAAAAATAGAACAAGCAGTGGCCAGGTTACAGGTAAGTTGCACCGGGATATTGAAGAA
ATGTGGTTAGAAGTGCTTGAAAATGTTGAAATAAATGGCTTAAAAGAGTTTATGTATCGT
GAAGGGAAGCTTACCTCAGTCAGCTTTGGAGCAGCTCCAACTGTGCAGTTACTGTTCAGC
TCACATCTAACAAAATCCAAGGTAGAGAAATTCAGGGGTCATATTTTACAAGCTTTTGAG
TCTGTTCTTGGGTCCCCCGTGACAATAGAAATCAGATGTGAATCCGGGAAAGATGGCAGG
GCAGGACCAATTGTGTTGTCAGCAGCACCTCATGGTGTATCTCATATCGGTACGAAACCT
GGCCTTTATGGTAATGGGGTGAGAATGGCAGGTCCTGATGAAATCAACAGGGCACAAGTA
AATGATAGAGAAGGTTTAGCATTTACAAAGCTCGACTCGAGAGGAATAGGTGGTAGTGAG
ATAGTTGAAGAGGAAGCTTCTCCAAGAGAATCGAAACACAATGAACAGATTGAGAACAAT
ACACGATTTGATAGGCGGAATTTAGAAAGTGATTTTCCAGGAGGGACAATGTCAATTGCC
AAAAATTCATCCACCTCCATTCCTGAACGAAGAAACTTAGGGGATAGAAGCCAGAGTTTG
AGCTTAGTTAAGAGCAAGGTATCTCTTGCTCACGTAATTCAGCAGGCAGAAGGATGCACG
CGGCAAAGTAGCTGGTCAAAACGCAAGGCTGTTTCTATTGCTGAAAAGCTTGAACAAGAG
AATTTGAGATTAGAAGCTAGGTCAAGGAACTTGCTTTGTTGGAAGGCTAAAAGAGTCACC
CGCCGACAGCTTTCGCGATTGAAAACTAGAAGTAGGAGGCCGAAGAGCTTACTGGGGTTC
GTTTCTTGCGGAAAATGTCTCTCTGGTAGGTCTCCAAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049551
PEP Infomation

pacid=37425311 transcript=PGSC0003DMT400073255 locus=PGSC0003DMG400028463 ID=PGSC0003DMT400073255.v4.03 annot-version=v4.03
Sequence

MTRAVRDRILKDANGNISDHLRNHIHLTNCIHLKNHMHKHSPILADRSLMRDLVVLQRSR
SLRDPSASPPSWQSPSVVDALLKRSERDAVMSNGRRSVGIDRPRDGIGLSGNSPPLAARS
SSRVASAEINKHNTERMAGAPSDRSSKSGVRERRRVRREESSRRNLGTDFIAEKDECSDD
GNDLVRNPVSENSEQKGRISNETERQRHDDRIRTLSEQLNDVPIDSDGVASSHIHARGRH
THNEKIAEQMEATTRGNGRVKRRKFRGARRTRTSVPSRDALAHNEMSVASNSLGQASAHQ
KYPAEDGYEEYVNQNVTRDPRNGCGIPWNWSRIHHRGKSFLDMAGKSLSCGLSDPRSKRS
GGGPTGRDAADMPIMSEYSSSSSKSEAEALPLLFDPSNSQGSSDHPAWVHDYSGELGIYA
DNLLKQELDSDLASEARSGEQRKFRRHGNSRHQSLTQKYMPRTFRDLVGQNLVAQALSNA
ALKRKVGLLYVFYGPHGTGKTSCARIFARALNCQSIEHPKPCGFCDSCIAHDMGRSRNIR
EIGPVSNFDFENMMDLLDNMIVSKLPSQYRVFIFDDCDTLSPDCWSAILKVIDRAPRRVV
FILVSSSLDVLPHIIISRCQKFFFPKLKDADIIYTLQWIATKEDLEIERDALKLIASRSD
GSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKHLRDIM
ESGVEPLALMSQLATVITDILAGSYDFTKERPRRKFFRRQAISKQDMEKLRQALKTLSEA
EKQLRMSNDRLTWLTAALLQLAPDQQYMLPNSSADTSFIQSPLGLNNAGGTERPRKSNVE
HADDMLHKDRGFPSKSRVENFQAGCSSNIYSDARVKGVRIGGKGHNGAGVLTQKAYSISS
DKNRTSSGQVTGKLHRDIEEMWLEVLENVEINGLKEFMYREGKLTSVSFGAAPTVQLLFS
SHLTKSKVEKFRGHILQAFESVLGSPVTIEIRCESGKDGRAGPIVLSAAPHGVSHIGTKP
GLYGNGVRMAGPDEINRAQVNDREGLAFTKLDSRGIGGSEIVEEEASPRESKHNEQIENN
TRFDRRNLESDFPGGTMSIAKNSSTSIPERRNLGDRSQSLSLVKSKVSLAHVIQQAEGCT
RQSSWSKRKAVSIAEKLEQENLRLEARSRNLLCWKAKRVTRRQLSRLKTRSRRPKSLLGF
VSCGKCLSGRSPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400073255
Transcript Infomation

pacid=37425311 locus=PGSC0003DMG400028463 ID=PGSC0003DMT400073255.v4.03 annot-version=v4.03
Sequence

ATGACCAGGGCTGTTCGTGACCGGATTCTTAAGGATGCAAATGGAAACATTAGTGATCAC
TTACGAAATCACATACATTTGACAAATTGTATTCATTTGAAGAACCACATGCATAAGCAT
AGCCCCATTTTGGCTGATAGGTCCCTTATGAGGGACCTTGTTGTCCTTCAGAGGTCAAGG
TCCTTAAGAGATCCTTCTGCAAGTCCACCCTCATGGCAATCTCCTTCGGTTGTCGATGCC
CTTCTTAAAAGAAGTGAAAGGGATGCTGTTATGAGCAATGGTAGGCGGTCTGTAGGCATA
GATCGACCTAGGGATGGTATAGGTTTATCTGGAAACTCGCCTCCTTTAGCTGCCCGATCG
TCGTCTAGAGTGGCTTCTGCAGAGATTAACAAGCATAATACTGAGCGAATGGCAGGGGCT
CCAAGTGATCGAAGTAGCAAGAGTGGAGTTCGCGAACGGAGGAGAGTCAGGAGAGAAGAA
TCAAGCCGTAGGAATCTGGGAACTGACTTCATTGCTGAAAAGGATGAGTGTTCGGATGAT
GGAAATGATTTGGTCCGCAATCCTGTTTCAGAGAACTCCGAACAAAAAGGTAGAATTAGC
AATGAAACAGAGAGGCAGAGGCATGATGATCGAATAAGGACCCTCTCTGAGCAATTAAAT
GATGTTCCAATTGACAGTGATGGGGTAGCTTCTTCTCACATTCATGCTCGTGGAAGGCAT
ACTCATAATGAGAAAATTGCAGAGCAAATGGAGGCAACAACTCGTGGCAATGGCAGAGTA
AAACGGCGTAAGTTTCGAGGGGCAAGAAGAACTCGCACTTCTGTTCCTTCAAGAGATGCT
CTTGCCCACAATGAAATGTCTGTGGCCTCAAATTCATTAGGTCAAGCTTCAGCACACCAA
AAATATCCTGCAGAAGATGGCTATGAAGAGTATGTCAACCAGAATGTAACAAGAGATCCA
AGGAATGGGTGCGGAATTCCTTGGAACTGGTCAAGGATTCATCATAGAGGAAAATCATTT
CTTGACATGGCTGGCAAGAGTTTATCTTGTGGTTTGTCTGACCCAAGGTCAAAAAGAAGT
GGTGGTGGTCCAACAGGGAGGGATGCTGCTGATATGCCAATAATGTCTGAATACTCGAGC
TCATCTAGTAAATCTGAAGCAGAGGCGTTGCCCTTACTATTTGATCCTTCAAATTCTCAG
GGCAGTTCAGACCATCCTGCTTGGGTTCATGATTATTCGGGGGAGTTGGGTATCTATGCT
GACAATTTACTAAAGCAAGAACTTGACTCGGATCTTGCTTCAGAAGCTAGATCAGGTGAG
CAACGCAAATTTCGTAGGCATGGCAATAGTAGGCACCAGAGTCTAACACAAAAGTATATG
CCAAGAACATTCCGGGATTTGGTAGGACAGAATTTAGTTGCGCAAGCTCTTTCAAATGCT
GCTCTTAAGAGAAAAGTTGGCTTGCTTTATGTTTTCTATGGGCCTCATGGAACAGGAAAG
ACCTCATGTGCCCGCATTTTTGCAAGGGCATTAAATTGCCAATCCATTGAGCATCCCAAG
CCTTGTGGTTTTTGTGATTCTTGCATTGCACATGATATGGGAAGGAGTCGAAATATAAGG
GAAATAGGTCCTGTGAGTAATTTTGATTTCGAGAATATGATGGATCTTCTTGATAATATG
ATTGTCTCCAAACTACCATCCCAGTATAGGGTTTTTATATTTGATGATTGTGACACACTG
TCTCCTGATTGTTGGAGTGCTATTCTAAAGGTCATCGATAGAGCTCCTAGGCGAGTTGTT
TTCATCCTTGTATCCTCAAGTCTTGATGTCTTGCCTCATATAATCATATCTAGGTGCCAG
AAATTCTTTTTTCCCAAGTTGAAGGATGCAGATATCATCTATACTTTGCAATGGATTGCA
ACCAAGGAAGATCTTGAAATCGAAAGGGATGCACTCAAGCTTATTGCATCAAGATCAGAT
GGATCGTTGAGAGATGCTGAAATGACTCTTGAGCAATTGAGTTTGCTTGGCCAGAGAATC
TCTGTCCCTCTTGTTCAGGAGCTGGTTGGACTTATTTCCGATGAGAAATTAGTGGACTTA
CTTGACTTGGCATTATCTGCTGACACTGTCAATACAGTGAAACATTTGAGGGATATCATG
GAATCTGGTGTTGAACCCTTAGCTTTAATGTCACAACTTGCTACAGTCATAACTGATATA
CTTGCTGGGAGCTATGACTTCACAAAAGAAAGGCCTCGGAGGAAGTTCTTTCGACGCCAA
GCAATATCAAAACAAGATATGGAAAAACTGCGTCAAGCTCTGAAAACACTATCTGAAGCT
GAAAAGCAGCTGAGAATGTCAAATGACAGACTTACCTGGCTTACAGCTGCATTGCTGCAA
CTCGCTCCAGATCAGCAGTATATGTTGCCCAATTCCTCAGCAGACACTAGTTTTATTCAA
AGTCCACTAGGCTTGAATAATGCAGGGGGAACAGAAAGACCCAGGAAAAGCAATGTTGAG
CATGCTGATGACATGCTACACAAAGACAGAGGGTTCCCATCAAAAAGTAGGGTAGAAAAC
TTTCAAGCTGGATGTTCTAGTAATATTTACTCCGACGCCAGGGTGAAAGGGGTTCGCATT
GGTGGAAAAGGGCATAATGGAGCTGGAGTACTTACTCAAAAAGCTTATAGCATCTCTAGT
GACAAAAATAGAACAAGCAGTGGCCAGGTTACAGGTAAGTTGCACCGGGATATTGAAGAA
ATGTGGTTAGAAGTGCTTGAAAATGTTGAAATAAATGGCTTAAAAGAGTTTATGTATCGT
GAAGGGAAGCTTACCTCAGTCAGCTTTGGAGCAGCTCCAACTGTGCAGTTACTGTTCAGC
TCACATCTAACAAAATCCAAGGTAGAGAAATTCAGGGGTCATATTTTACAAGCTTTTGAG
TCTGTTCTTGGGTCCCCCGTGACAATAGAAATCAGATGTGAATCCGGGAAAGATGGCAGG
GCAGGACCAATTGTGTTGTCAGCAGCACCTCATGGTGTATCTCATATCGGTACGAAACCT
GGCCTTTATGGTAATGGGGTGAGAATGGCAGGTCCTGATGAAATCAACAGGGCACAAGTA
AATGATAGAGAAGGTTTAGCATTTACAAAGCTCGACTCGAGAGGAATAGGTGGTAGTGAG
ATAGTTGAAGAGGAAGCTTCTCCAAGAGAATCGAAACACAATGAACAGATTGAGAACAAT
ACACGATTTGATAGGCGGAATTTAGAAAGTGATTTTCCAGGAGGGACAATGTCAATTGCC
AAAAATTCATCCACCTCCATTCCTGAACGAAGAAACTTAGGGGATAGAAGCCAGAGTTTG
AGCTTAGTTAAGAGCAAGGTATCTCTTGCTCACGTAATTCAGCAGGCAGAAGGATGCACG
CGGCAAAGTAGCTGGTCAAAACGCAAGGCTGTTTCTATTGCTGAAAAGCTTGAACAAGAG
AATTTGAGATTAGAAGCTAGGTCAAGGAACTTGCTTTGTTGGAAGGCTAAAAGAGTCACC
CGCCGACAGCTTTCGCGATTGAAAACTAGAAGTAGGAGGCCGAAGAGCTTACTGGGGTTC
GTTTCTTGCGGAAAATGTCTCTCTGGTAGGTCTCCAAGGTAG