Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073254
CDS Infomation

pacid=37426390 polypeptide=PGSC0003DMP400049550 locus=PGSC0003DMG400028462 ID=PGSC0003DMT400073254.v4.03 annot-version=v4.03
Sequence

ATGGCATCTGCTGCAATTTTCTCATCGTTGAGGAGACAAAGGTCGCCGACACTGGAAGCG
TTCTTGGCGCCGGTGGATCTGACAGATGTTGGGTTGTTGCAAACACTAACGGCGTTATCT
TCTGAGCTGATTTCTGCATATTCAGGTAAAAAGCTGCCGTTTTATCAGCGGAAGAATTGT
AAGTCTTTGTTAAGGAAAATTCAAGTGTTTTCTGTTCTCTTGGAATGTCTTCTTGAGAAT
AACAAGAACAGAAGTAGGGGTTCTTCAGATTTGCCGTTTACAGCTTTTTTGTGCTTCAAG
GAATTGTATTTATTGCTTTACCGGTCGAAAATCTTGCTTGATTATTGCTCTCATTCCAGT
AAGTTGTGGCTGTTGCTACAAAACCATTCGATTTCAGGTCATTTCCATGATTTGAACCAA
GAAATCTCGACCCTTTTGGATGTTTTCCCCTTAAAGGATTTAAAAAGTTTACCTGAAGAT
GTTAGGGAACAGGTTGAGTTGTTGAAGAAACAAGCAAGAAAATCTCAGCTGTTTGTTGAT
AAACATGATGAGATGCTGAGGTTGAAACTGTTCTCTTTCTTGAATGAGTTTGAGAATGGA
GGTGTTCCTGACTATGCTCAGTTGTACTCTTTTTTTGTGGAAAAATTGGGGATTTGTAAT
CCTAGGAGTTGCAGGGTTGAGATTGAGTTTTTGGAGGAGCAGATTGTGAACCATGAAGGA
GATATTGAGCCCACATCCTCAGTTCTCAACGGGTTTGTGGCGTTGATGCGATACTGCAGG
TTTTTGCTATTTGGCTTTGAAGAGGATGATATGGGATTGAGATTGGGTAAGCATAAGAAG
CCGAAGAGAGGGCTGATTAGTCAAGAGATTGCAGAGACATTCATTTCTGTACCAAAGGAC
TTCTGTTGTCCAATATCGTTGGATTTGATGAGGGATCCAGTTATTGTGGCAACAGGGCAG
ACATATGATCGAGCTCCCATATCGAGGTGGATGGAGGAGGGTCACTGTACTTGCCCAAAG
ACTGGGCAGTTGCTTGATCATACCCGGCTTGTGCCAAACAGGGCTCTTAGGAATTTGATT
ATGCATTGGTGTGCTGCTCGCAAAATTCCCTATGACCCTCTGGAGAGTGGGGATCCATGT
GTTGAATGTTTTCCATCTGCTTCACCTAGCAGGGCTGCATTAGAAGCTAATAAAGCCACA
GCAGCTCTTCTCATTAAGCAGCTAGAGAATGGGACGCAGATTGCAAAAACTATTGCTGCT
CGGGAGATAAGACTTTTAGCTAAAACTGGTAAGGAGAATCGTGCATACATAGCTGAGGCT
GGTGCAATCCCACATTTGAAGAATTTGCTTTCATCTCCAGATGCTGTGGCACAAGAAAAT
TCCGTCACTGCAATGCTTAACTTATCGATTTTTGATAAGAATAAAGGTCGAATTATTGAT
GAAGTAGGGTGCCTGGCATTGATAGTTGGAGTGTTGAGATTTGGGCACACCACAGAGGCA
CGGGAAAATGCTGCAGCAACATTGTTCAGTCTGTCAGCTGTTCATGACTATAAGAGGCAA
ATAGCAAAAGAAGATGGGGCAGTCGAGGCCTTAGCAGGTCTGTTGCGAGAAGGTTCTCCT
CGAGGGAAGAAGGATGCAGTAACTGCTCTATTTAATTTGTCTACCCACACAGATAATTGT
GCGAGGATGATAGAGTCTGGAGCTGTTACTGCTCTAGTTGGAGCTTTGGGAAGTGAAGGT
GTTGCCGAAGAAGCTGCTGGTGCATTGGCGCTGATTGTTAGGCAGCAAGTTGGTGCTACA
GCTGTTGGCAATGAGGAAACGGCAGTAGCAGGGCTCATTTCAATGATGCGATGTGGGACA
CCAAGAGGGAAAGAGAATGCAGTTGCTGCATTGCTTGAATTATGCCGTGGTGGTGGAGCA
GCTGCTACTGAGAGGGTCTTGAAGGCGCCGTCATTAGCAAGTTTACTTCAGACATTGCTC
TTTACAGGAACAAAGCGCGCAAGGAGGAAAGCAGCATCGCTTGCTAGAGTATTCCAACGG
TGTGAGCATGCATCAGTTCATTATAGCGGGTTTGGTGTAGGATATGCATTTTCTGGGAAC
TCAGCTGCAGCTAGGGATTCAACTTTTCCTGGTGATGTCTCAGTGTCCATGTCCATTTCA
GTTCCAGTATTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400049550
PEP Infomation

pacid=37426390 transcript=PGSC0003DMT400073254 locus=PGSC0003DMG400028462 ID=PGSC0003DMT400073254.v4.03 annot-version=v4.03
Sequence

MASAAIFSSLRRQRSPTLEAFLAPVDLTDVGLLQTLTALSSELISAYSGKKLPFYQRKNC
KSLLRKIQVFSVLLECLLENNKNRSRGSSDLPFTAFLCFKELYLLLYRSKILLDYCSHSS
KLWLLLQNHSISGHFHDLNQEISTLLDVFPLKDLKSLPEDVREQVELLKKQARKSQLFVD
KHDEMLRLKLFSFLNEFENGGVPDYAQLYSFFVEKLGICNPRSCRVEIEFLEEQIVNHEG
DIEPTSSVLNGFVALMRYCRFLLFGFEEDDMGLRLGKHKKPKRGLISQEIAETFISVPKD
FCCPISLDLMRDPVIVATGQTYDRAPISRWMEEGHCTCPKTGQLLDHTRLVPNRALRNLI
MHWCAARKIPYDPLESGDPCVECFPSASPSRAALEANKATAALLIKQLENGTQIAKTIAA
REIRLLAKTGKENRAYIAEAGAIPHLKNLLSSPDAVAQENSVTAMLNLSIFDKNKGRIID
EVGCLALIVGVLRFGHTTEARENAAATLFSLSAVHDYKRQIAKEDGAVEALAGLLREGSP
RGKKDAVTALFNLSTHTDNCARMIESGAVTALVGALGSEGVAEEAAGALALIVRQQVGAT
AVGNEETAVAGLISMMRCGTPRGKENAVAALLELCRGGGAAATERVLKAPSLASLLQTLL
FTGTKRARRKAASLARVFQRCEHASVHYSGFGVGYAFSGNSAAARDSTFPGDVSVSMSIS
VPVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073254
Transcript Infomation

pacid=37426390 locus=PGSC0003DMG400028462 ID=PGSC0003DMT400073254.v4.03 annot-version=v4.03
Sequence

ATGGCATCTGCTGCAATTTTCTCATCGTTGAGGAGACAAAGGTCGCCGACACTGGAAGCG
TTCTTGGCGCCGGTGGATCTGACAGATGTTGGGTTGTTGCAAACACTAACGGCGTTATCT
TCTGAGCTGATTTCTGCATATTCAGGTAAAAAGCTGCCGTTTTATCAGCGGAAGAATTGT
AAGTCTTTGTTAAGGAAAATTCAAGTGTTTTCTGTTCTCTTGGAATGTCTTCTTGAGAAT
AACAAGAACAGAAGTAGGGGTTCTTCAGATTTGCCGTTTACAGCTTTTTTGTGCTTCAAG
GAATTGTATTTATTGCTTTACCGGTCGAAAATCTTGCTTGATTATTGCTCTCATTCCAGT
AAGTTGTGGCTGTTGCTACAAAACCATTCGATTTCAGGTCATTTCCATGATTTGAACCAA
GAAATCTCGACCCTTTTGGATGTTTTCCCCTTAAAGGATTTAAAAAGTTTACCTGAAGAT
GTTAGGGAACAGGTTGAGTTGTTGAAGAAACAAGCAAGAAAATCTCAGCTGTTTGTTGAT
AAACATGATGAGATGCTGAGGTTGAAACTGTTCTCTTTCTTGAATGAGTTTGAGAATGGA
GGTGTTCCTGACTATGCTCAGTTGTACTCTTTTTTTGTGGAAAAATTGGGGATTTGTAAT
CCTAGGAGTTGCAGGGTTGAGATTGAGTTTTTGGAGGAGCAGATTGTGAACCATGAAGGA
GATATTGAGCCCACATCCTCAGTTCTCAACGGGTTTGTGGCGTTGATGCGATACTGCAGG
TTTTTGCTATTTGGCTTTGAAGAGGATGATATGGGATTGAGATTGGGTAAGCATAAGAAG
CCGAAGAGAGGGCTGATTAGTCAAGAGATTGCAGAGACATTCATTTCTGTACCAAAGGAC
TTCTGTTGTCCAATATCGTTGGATTTGATGAGGGATCCAGTTATTGTGGCAACAGGGCAG
ACATATGATCGAGCTCCCATATCGAGGTGGATGGAGGAGGGTCACTGTACTTGCCCAAAG
ACTGGGCAGTTGCTTGATCATACCCGGCTTGTGCCAAACAGGGCTCTTAGGAATTTGATT
ATGCATTGGTGTGCTGCTCGCAAAATTCCCTATGACCCTCTGGAGAGTGGGGATCCATGT
GTTGAATGTTTTCCATCTGCTTCACCTAGCAGGGCTGCATTAGAAGCTAATAAAGCCACA
GCAGCTCTTCTCATTAAGCAGCTAGAGAATGGGACGCAGATTGCAAAAACTATTGCTGCT
CGGGAGATAAGACTTTTAGCTAAAACTGGTAAGGAGAATCGTGCATACATAGCTGAGGCT
GGTGCAATCCCACATTTGAAGAATTTGCTTTCATCTCCAGATGCTGTGGCACAAGAAAAT
TCCGTCACTGCAATGCTTAACTTATCGATTTTTGATAAGAATAAAGGTCGAATTATTGAT
GAAGTAGGGTGCCTGGCATTGATAGTTGGAGTGTTGAGATTTGGGCACACCACAGAGGCA
CGGGAAAATGCTGCAGCAACATTGTTCAGTCTGTCAGCTGTTCATGACTATAAGAGGCAA
ATAGCAAAAGAAGATGGGGCAGTCGAGGCCTTAGCAGGTCTGTTGCGAGAAGGTTCTCCT
CGAGGGAAGAAGGATGCAGTAACTGCTCTATTTAATTTGTCTACCCACACAGATAATTGT
GCGAGGATGATAGAGTCTGGAGCTGTTACTGCTCTAGTTGGAGCTTTGGGAAGTGAAGGT
GTTGCCGAAGAAGCTGCTGGTGCATTGGCGCTGATTGTTAGGCAGCAAGTTGGTGCTACA
GCTGTTGGCAATGAGGAAACGGCAGTAGCAGGGCTCATTTCAATGATGCGATGTGGGACA
CCAAGAGGGAAAGAGAATGCAGTTGCTGCATTGCTTGAATTATGCCGTGGTGGTGGAGCA
GCTGCTACTGAGAGGGTCTTGAAGGCGCCGTCATTAGCAAGTTTACTTCAGACATTGCTC
TTTACAGGAACAAAGCGCGCAAGGAGGAAAGCAGCATCGCTTGCTAGAGTATTCCAACGG
TGTGAGCATGCATCAGTTCATTATAGCGGGTTTGGTGTAGGATATGCATTTTCTGGGAAC
TCAGCTGCAGCTAGGGATTCAACTTTTCCTGGTGATGTCTCAGTGTCCATGTCCATTTCA
GTTCCAGTATTATAG