Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073150
CDS Infomation

pacid=37426705 polypeptide=PGSC0003DMP400049494 locus=PGSC0003DMG400028448 ID=PGSC0003DMT400073150.v4.03 annot-version=v4.03
Sequence

ATGGAGGATTCAAACCCCAAGAAAAGTTTTGCCTCAGATGCTTTAATTACTACTCTCAGC
AACTCAATCCAAGCTCTGGGTAGGGGATTTGATGTCACTTCTGATATTAGGCTTCTGTAT
TGTAAAGGGGCTCCAGGGTCTCGTTTAGTTCATCTTGATGAGGAAAATCGTGTGGATCTT
TTGCACCCAGATGGGGGTATTTTGCTGCCAAATGTTACTGTAGACATTGAATGTTCACAA
GAGTTGAGAACCATTGAGGCCACACCTGTTTTTACCTTCCATGAGATGGCAAATCACTTC
AATGCAATCTCCAATATATCTGGAGATGTCCCACTTGGAAGCTTTAACTCCATGTTTAAC
TTCACTGGTTCATGGCAACAAGATGCGGCAGCTACTAAATCTCTTGCCATGATTGGACAT
GTTATCCCACTCTTTACAGTGAGATTAGTAAAGTTTGATTTACTTCTACGAGATGAAATC
AAGCGTGCTGTTCCATACTCTTGGGATCCTGCATCACTGGCAAGCTTTATTGAAAACTAT
GGCACCCATATTGTCACCTCCGCGACGATCGGTGGTAGGGATGTAGTTTATATTAAACAA
CACCAGTCATCTCCTTTGTTAGTTTCAGACATTGAAAACTATGTGAACGACATTGGAGAG
CAGAGGTTCTCTGATTCGAAGAATCTCTCAAGTGCCGGACCTTTAAGATATAAGGACAAG
GATGTTACAGTTATTTTTCGCAGAAGAGGAGGTGATGACCTGGAGCAGAGTCATGACAAG
TGGGCAAGCACTGTAGAAACATCACCAGATGTGATCAACATGACTTTTACTCCCATTGTG
TCATTTCTTGAAGAGGTGCCTGGAATTAAGTACCTGAGCCGCGCAATTGAGTTATACTTA
GAATACAAGCCACCAATAGAAGATTTACAGTATTTCTTAGATTTCCAAATAGCTCGTGTG
TGGGCTCCAGAGCAAAATAACCTTCAAAGAAAGGAGCCTGTATGTTCATCCCTACAGTTC
AGTTTGATGGGTCCTAAGCTCTATATTAGCCCGGATCAGGTGACAGTGGGTCGTAAGCCA
GTGACAGGGCTCAGGCTCAGCCTAGAAGGTGACAAGCAGAACCGTCTTTCAGTCAATTTG
CAGCACCTTGTTTCCCTCCCTAAGATCCTTCAACCCCACTGGGATGCACACATGGCTATA
GGTGCCCCAAAATGGAAAGGCCCTGAAGAGCAGGATAGCAGATGGTTTGAACCAATCAAA
TGGAAAAATTTCTCCCATGTAAGCACAGCACCAATTGAACATACTGAGACTTCCATTGGA
GATCTCTCTGGTGTTCACATTGTGACGGGGGCTCAGCTTGGTGTTTGGGATTTTGGTGCC
AAGAGTGTCTTGCATCTTAAACTCCTCTTTTCCAAGGTACCTGGCTGTACAATAAGAAGA
TCGGTATGGGATCACAGTCCATCAAATCTATCAGCAGTACAAAGGATTGATGGTTCTTCA
ACTTCACTTCAGAACGAAAACAAGAAAGGTGATACTTCCAGCCAAACAGGGAAATTGGCA
AAAATTGTAGACATGACAGAAATGTCAAAGGGGCCACAGGATGCACCAGGACACTGGTTG
GTAACAGGAGCTAAACTTGGAGTTGATAAAGGAAAAATTGTGCTAAGAGTGAAGTATTCC
CTGTTGAATTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049494
PEP Infomation

pacid=37426705 transcript=PGSC0003DMT400073150 locus=PGSC0003DMG400028448 ID=PGSC0003DMT400073150.v4.03 annot-version=v4.03
Sequence

MEDSNPKKSFASDALITTLSNSIQALGRGFDVTSDIRLLYCKGAPGSRLVHLDEENRVDL
LHPDGGILLPNVTVDIECSQELRTIEATPVFTFHEMANHFNAISNISGDVPLGSFNSMFN
FTGSWQQDAAATKSLAMIGHVIPLFTVRLVKFDLLLRDEIKRAVPYSWDPASLASFIENY
GTHIVTSATIGGRDVVYIKQHQSSPLLVSDIENYVNDIGEQRFSDSKNLSSAGPLRYKDK
DVTVIFRRRGGDDLEQSHDKWASTVETSPDVINMTFTPIVSFLEEVPGIKYLSRAIELYL
EYKPPIEDLQYFLDFQIARVWAPEQNNLQRKEPVCSSLQFSLMGPKLYISPDQVTVGRKP
VTGLRLSLEGDKQNRLSVNLQHLVSLPKILQPHWDAHMAIGAPKWKGPEEQDSRWFEPIK
WKNFSHVSTAPIEHTETSIGDLSGVHIVTGAQLGVWDFGAKSVLHLKLLFSKVPGCTIRR
SVWDHSPSNLSAVQRIDGSSTSLQNENKKGDTSSQTGKLAKIVDMTEMSKGPQDAPGHWL
VTGAKLGVDKGKIVLRVKYSLLNY*

Transcript Sequence

Transcript ID

PGSC0003DMT400073150
Transcript Infomation

pacid=37426705 locus=PGSC0003DMG400028448 ID=PGSC0003DMT400073150.v4.03 annot-version=v4.03
Sequence

ATGGAGGATTCAAACCCCAAGAAAAGTTTTGCCTCAGATGCTTTAATTACTACTCTCAGC
AACTCAATCCAAGCTCTGGGTAGGGGATTTGATGTCACTTCTGATATTAGGCTTCTGTAT
TGTAAAGGGGCTCCAGGGTCTCGTTTAGTTCATCTTGATGAGGAAAATCGTGTGGATCTT
TTGCACCCAGATGGGGGTATTTTGCTGCCAAATGTTACTGTAGACATTGAATGTTCACAA
GAGTTGAGAACCATTGAGGCCACACCTGTTTTTACCTTCCATGAGATGGCAAATCACTTC
AATGCAATCTCCAATATATCTGGAGATGTCCCACTTGGAAGCTTTAACTCCATGTTTAAC
TTCACTGGTTCATGGCAACAAGATGCGGCAGCTACTAAATCTCTTGCCATGATTGGACAT
GTTATCCCACTCTTTACAGTGAGATTAGTAAAGTTTGATTTACTTCTACGAGATGAAATC
AAGCGTGCTGTTCCATACTCTTGGGATCCTGCATCACTGGCAAGCTTTATTGAAAACTAT
GGCACCCATATTGTCACCTCCGCGACGATCGGTGGTAGGGATGTAGTTTATATTAAACAA
CACCAGTCATCTCCTTTGTTAGTTTCAGACATTGAAAACTATGTGAACGACATTGGAGAG
CAGAGGTTCTCTGATTCGAAGAATCTCTCAAGTGCCGGACCTTTAAGATATAAGGACAAG
GATGTTACAGTTATTTTTCGCAGAAGAGGAGGTGATGACCTGGAGCAGAGTCATGACAAG
TGGGCAAGCACTGTAGAAACATCACCAGATGTGATCAACATGACTTTTACTCCCATTGTG
TCATTTCTTGAAGAGGTGCCTGGAATTAAGTACCTGAGCCGCGCAATTGAGTTATACTTA
GAATACAAGCCACCAATAGAAGATTTACAGTATTTCTTAGATTTCCAAATAGCTCGTGTG
TGGGCTCCAGAGCAAAATAACCTTCAAAGAAAGGAGCCTGTATGTTCATCCCTACAGTTC
AGTTTGATGGGTCCTAAGCTCTATATTAGCCCGGATCAGGTGACAGTGGGTCGTAAGCCA
GTGACAGGGCTCAGGCTCAGCCTAGAAGGTGACAAGCAGAACCGTCTTTCAGTCAATTTG
CAGCACCTTGTTTCCCTCCCTAAGATCCTTCAACCCCACTGGGATGCACACATGGCTATA
GGTGCCCCAAAATGGAAAGGCCCTGAAGAGCAGGATAGCAGATGGTTTGAACCAATCAAA
TGGAAAAATTTCTCCCATGTAAGCACAGCACCAATTGAACATACTGAGACTTCCATTGGA
GATCTCTCTGGTGTTCACATTGTGACGGGGGCTCAGCTTGGTGTTTGGGATTTTGGTGCC
AAGAGTGTCTTGCATCTTAAACTCCTCTTTTCCAAGGTACCTGGCTGTACAATAAGAAGA
TCGGTATGGGATCACAGTCCATCAAATCTATCAGCAGTACAAAGGATTGATGGTTCTTCA
ACTTCACTTCAGAACGAAAACAAGAAAGGTGATACTTCCAGCCAAACAGGGAAATTGGCA
AAAATTGTAGACATGACAGAAATGTCAAAGGGGCCACAGGATGCACCAGGACACTGGTTG
GTAACAGGAGCTAAACTTGGAGTTGATAAAGGAAAAATTGTGCTAAGAGTGAAGTATTCC
CTGTTGAATTATTAA