Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073118
CDS Infomation

pacid=37425144 polypeptide=PGSC0003DMP400049475 locus=PGSC0003DMG400028436 ID=PGSC0003DMT400073118.v4.03 annot-version=v4.03
Sequence

ATGAGATTATATCTTAATGGTAACAAATTCAGTGGTCAGATTCCTAACTCATTGGGGGGT
TTGAGGCATCTTGAACATCTGGACTTGTCCAATAATAACTTATTATCTCTGCACCTAAGT
ATCTTAACTTCATTGACAAACTGCAGATCATTGAAAGAAGTTTACTTAGACCATAATCTT
CTCGATGGTGTTATTCCAGATTCCATTGGCAATCTCTCCACTACCATTATGGAATTTTAT
TTAGACAGTTGTGAAATAAGGAGTCAGATACCATTAGGAATTGGGAATTTAAGTAACTTA
AACACTTTGTCCCTAACCCACAATGACTTGACTGGATCAGTGCCAACAGCATTATGTAAT
TTACATATTCTTCAAAGGGTAGCAATTGAGGATAATAGGTTAAGTGGACCGTTGCCCCAG
TGCCTTTGCAAATTATCATCCTTGGGCATGGTTGATTTTTCTAATAATAGGATTTCGGGT
CCGGTACCGTCTTGCATTGGTAATGCAACCTCTTTGAGAAATGTTTATCTAAATTCAAAT
AGGATCACTAACATACCCATGAGTCTATGGAGCCTCAAAGATCTTTTGGATCTTAACTTG
TCAAATAATTCCTTGGTTGGTTCTATACCTCCAGAGTTAGGAAAGTTGAAAGCCATAGCA
TCCATAGATCTTTCCAGGAATCACCTTTCAGGAAGTATTCCCTCCACAATTGGAGACTTG
CAGAATCTATTTTATCTTTCGTTGGCTTATAATGAGTTACAAGGATCTATTCCGGAGTCA
CTCGAGAATACGATAAGTTTGGAATCAGCAAATCCATCCAATAATTTTCTTTCAGGTATG
ATTCCAAAATCATTAGAGTCACTTCGACATCTGAAGGATCTCAATGTATCATTCAATAGA
TTAGAAGGTGAAATCCCAAGTAAAGGACCTTTTCTCAATTTCACCTCTCAATCTTTTATG
GGAAATGAAGGGTTATGCGGCGGTTTAGTTTTCCAACCTTGTATGACTAGGTCTTTTCAT
CATTCAAGGAAAAGCAAACTGCTTTTGATTATACTTGTCTTCCTGGGAGCTGCAGTAGTG
GTACTTGGCTCAATCGTTGTGTTTATGTTAAGGAGACGTTGGAATAGAAATATTCCAACT
CAAGCTGAATCCTTTACTGCAACAACACTAGCCAGGATTTCATACATTGAAATTGAAAGG
GCAACTCAAGGGTTCGACCAATGCAACTTGCTAGGCACTGGAGGTTTTAGCTCTGTTTAT
AAGGGCATGTTTGCAAATGGGATGACTATGGCAATCAAAGTGTTTAATTTACAGATTGAA
GGTGCGTTAAAGAGTTTCGATGCTGAATGTGAAGTTTTACGCAACCTTCGTCATAGAAAT
CTCACCAAAGTTATCAGCAGTTGTACTAACTTGGATTTTAAAGCATTACTTCTTGAGTAT
ATGCCCAATGGAAGCCTAGAGCTGTGGCTACATTCTGATGATCGCTTCTTGAATATGATC
CAAAGACTAGACATAATGATCGATGTTGCATTTGCTTTGGAATATCTCCATCACGGTTAT
GAAACAGTTGTTGTACATAGTGACCTGAAGCCTAGCAACGTCTTGCTAGATGAAAAGTTG
GTTATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049475
PEP Infomation

pacid=37425144 transcript=PGSC0003DMT400073118 locus=PGSC0003DMG400028436 ID=PGSC0003DMT400073118.v4.03 annot-version=v4.03
Sequence

MRLYLNGNKFSGQIPNSLGGLRHLEHLDLSNNNLLSLHLSILTSLTNCRSLKEVYLDHNL
LDGVIPDSIGNLSTTIMEFYLDSCEIRSQIPLGIGNLSNLNTLSLTHNDLTGSVPTALCN
LHILQRVAIEDNRLSGPLPQCLCKLSSLGMVDFSNNRISGPVPSCIGNATSLRNVYLNSN
RITNIPMSLWSLKDLLDLNLSNNSLVGSIPPELGKLKAIASIDLSRNHLSGSIPSTIGDL
QNLFYLSLAYNELQGSIPESLENTISLESANPSNNFLSGMIPKSLESLRHLKDLNVSFNR
LEGEIPSKGPFLNFTSQSFMGNEGLCGGLVFQPCMTRSFHHSRKSKLLLIILVFLGAAVV
VLGSIVVFMLRRRWNRNIPTQAESFTATTLARISYIEIERATQGFDQCNLLGTGGFSSVY
KGMFANGMTMAIKVFNLQIEGALKSFDAECEVLRNLRHRNLTKVISSCTNLDFKALLLEY
MPNGSLELWLHSDDRFLNMIQRLDIMIDVAFALEYLHHGYETVVVHSDLKPSNVLLDEKL
VM*

Transcript Sequence

Transcript ID

PGSC0003DMT400073118
Transcript Infomation

pacid=37425144 locus=PGSC0003DMG400028436 ID=PGSC0003DMT400073118.v4.03 annot-version=v4.03
Sequence

ATGAGATTATATCTTAATGGTAACAAATTCAGTGGTCAGATTCCTAACTCATTGGGGGGT
TTGAGGCATCTTGAACATCTGGACTTGTCCAATAATAACTTATTATCTCTGCACCTAAGT
ATCTTAACTTCATTGACAAACTGCAGATCATTGAAAGAAGTTTACTTAGACCATAATCTT
CTCGATGGTGTTATTCCAGATTCCATTGGCAATCTCTCCACTACCATTATGGAATTTTAT
TTAGACAGTTGTGAAATAAGGAGTCAGATACCATTAGGAATTGGGAATTTAAGTAACTTA
AACACTTTGTCCCTAACCCACAATGACTTGACTGGATCAGTGCCAACAGCATTATGTAAT
TTACATATTCTTCAAAGGGTAGCAATTGAGGATAATAGGTTAAGTGGACCGTTGCCCCAG
TGCCTTTGCAAATTATCATCCTTGGGCATGGTTGATTTTTCTAATAATAGGATTTCGGGT
CCGGTACCGTCTTGCATTGGTAATGCAACCTCTTTGAGAAATGTTTATCTAAATTCAAAT
AGGATCACTAACATACCCATGAGTCTATGGAGCCTCAAAGATCTTTTGGATCTTAACTTG
TCAAATAATTCCTTGGTTGGTTCTATACCTCCAGAGTTAGGAAAGTTGAAAGCCATAGCA
TCCATAGATCTTTCCAGGAATCACCTTTCAGGAAGTATTCCCTCCACAATTGGAGACTTG
CAGAATCTATTTTATCTTTCGTTGGCTTATAATGAGTTACAAGGATCTATTCCGGAGTCA
CTCGAGAATACGATAAGTTTGGAATCAGCAAATCCATCCAATAATTTTCTTTCAGGTATG
ATTCCAAAATCATTAGAGTCACTTCGACATCTGAAGGATCTCAATGTATCATTCAATAGA
TTAGAAGGTGAAATCCCAAGTAAAGGACCTTTTCTCAATTTCACCTCTCAATCTTTTATG
GGAAATGAAGGGTTATGCGGCGGTTTAGTTTTCCAACCTTGTATGACTAGGTCTTTTCAT
CATTCAAGGAAAAGCAAACTGCTTTTGATTATACTTGTCTTCCTGGGAGCTGCAGTAGTG
GTACTTGGCTCAATCGTTGTGTTTATGTTAAGGAGACGTTGGAATAGAAATATTCCAACT
CAAGCTGAATCCTTTACTGCAACAACACTAGCCAGGATTTCATACATTGAAATTGAAAGG
GCAACTCAAGGGTTCGACCAATGCAACTTGCTAGGCACTGGAGGTTTTAGCTCTGTTTAT
AAGGGCATGTTTGCAAATGGGATGACTATGGCAATCAAAGTGTTTAATTTACAGATTGAA
GGTGCGTTAAAGAGTTTCGATGCTGAATGTGAAGTTTTACGCAACCTTCGTCATAGAAAT
CTCACCAAAGTTATCAGCAGTTGTACTAACTTGGATTTTAAAGCATTACTTCTTGAGTAT
ATGCCCAATGGAAGCCTAGAGCTGTGGCTACATTCTGATGATCGCTTCTTGAATATGATC
CAAAGACTAGACATAATGATCGATGTTGCATTTGCTTTGGAATATCTCCATCACGGTTAT
GAAACAGTTGTTGTACATAGTGACCTGAAGCCTAGCAACGTCTTGCTAGATGAAAAGTTG
GTTATGTGA