Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073096
CDS Infomation

pacid=37425106 polypeptide=PGSC0003DMP400049466 locus=PGSC0003DMG400028431 ID=PGSC0003DMT400073096.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAGGAAGACGAATTACCGATATTCCGTGTCTTCACGAAGAGATTCTTGGTGTT
ATTTTTTCAAGATTACCAGTTAAAACTCTGCTGCGATTGAAGTGCTCACATAAGGGCTAT
TGCGATCTGATTTCAAGCCCCTGGTTTATGACTCTGCATCGCAAGAGGTTTAGTTCAGAC
CCTGATAACCATTGTATCTTTGTTCAGACTGGGAAGATAAATCGTTTGATCCGTATACAA
AATCCTGGCAACTTGATAAAGCTTAATGAACCATGTAGGACAGATTATACTGTTATAGGT
TCAATCAATGGCTTGATCTGTCTAGCTACTAATATTGCTTCCCGTCAATGGATTTGCATT
TGGAACCCTTCCATTAATCAATACAAGATGTTTCCTGTGCACAGTGATAACCCTGAAAAG
ACACGCAAATGTGATGTTAGTATGGGTTTTGGATATGAAAAAGGTTGTGATGATTACAAG
GTCATCAGGGTTCTAAGCTATAAAACAGGTTGGCCATTGACTATACTTGAGATTTACTCA
ACAAATTCGGACTCTTGGAAAGAAGTGAAGTCTGATAGTCGCTTAATTAAATTGAATACC
TGCTTCTGTAATGTAATTGTTGAAGGGCTTCCTTACTGGGTTGCCAAGGACTTGGATGGA
AGTACTGTTCTTGCCTCGTTTGTTTGGAGTATAGAGAAGTTCTTCATAATTCCTTTACCG
GAAGAAGTGATAACTAAATCTCAAACTTTTGTGGCCACGAACTATCATGGGTCATTTGCA
TTGCTTGCATACTCTTCACCCAGCAAATTCAAGGCGTGTATTGACGTTTGGGAGATTGAA
CTTGATATCTCTGCAGAGGAGTGTGACTGGAAAAAGAAGGACACCTTTCACACGGATTTT
GGCTTTTCAATGCATTGGGGTCTTACTGGTGGAGGTATAGTAGTTGAAAATGCTCCAAAC
ATGCCGTTCTTGTTCAACGTGACAACAAAACAGAGGTGGGAAATGGGAATAAATCCTATT
CTTTCACTTTCCAACTATACTGAGAGCCTTGTATCAATTAAGGGGTTCAGGCGTGTCCGC
AATCAACTGAAAAGGAAGAGGAAGGCTTCAAATCCAGTAAGAGCAAGATTGAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049466
PEP Infomation

pacid=37425106 transcript=PGSC0003DMT400073096 locus=PGSC0003DMG400028431 ID=PGSC0003DMT400073096.v4.03 annot-version=v4.03
Sequence

MKKGRRITDIPCLHEEILGVIFSRLPVKTLLRLKCSHKGYCDLISSPWFMTLHRKRFSSD
PDNHCIFVQTGKINRLIRIQNPGNLIKLNEPCRTDYTVIGSINGLICLATNIASRQWICI
WNPSINQYKMFPVHSDNPEKTRKCDVSMGFGYEKGCDDYKVIRVLSYKTGWPLTILEIYS
TNSDSWKEVKSDSRLIKLNTCFCNVIVEGLPYWVAKDLDGSTVLASFVWSIEKFFIIPLP
EEVITKSQTFVATNYHGSFALLAYSSPSKFKACIDVWEIELDISAEECDWKKKDTFHTDF
GFSMHWGLTGGGIVVENAPNMPFLFNVTTKQRWEMGINPILSLSNYTESLVSIKGFRRVR
NQLKRKRKASNPVRARLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400073096
Transcript Infomation

pacid=37425106 locus=PGSC0003DMG400028431 ID=PGSC0003DMT400073096.v4.03 annot-version=v4.03
Sequence

ATGAAGAAAGGAAGACGAATTACCGATATTCCGTGTCTTCACGAAGAGATTCTTGGTGTT
ATTTTTTCAAGATTACCAGTTAAAACTCTGCTGCGATTGAAGTGCTCACATAAGGGCTAT
TGCGATCTGATTTCAAGCCCCTGGTTTATGACTCTGCATCGCAAGAGGTTTAGTTCAGAC
CCTGATAACCATTGTATCTTTGTTCAGACTGGGAAGATAAATCGTTTGATCCGTATACAA
AATCCTGGCAACTTGATAAAGCTTAATGAACCATGTAGGACAGATTATACTGTTATAGGT
TCAATCAATGGCTTGATCTGTCTAGCTACTAATATTGCTTCCCGTCAATGGATTTGCATT
TGGAACCCTTCCATTAATCAATACAAGATGTTTCCTGTGCACAGTGATAACCCTGAAAAG
ACACGCAAATGTGATGTTAGTATGGGTTTTGGATATGAAAAAGGTTGTGATGATTACAAG
GTCATCAGGGTTCTAAGCTATAAAACAGGTTGGCCATTGACTATACTTGAGATTTACTCA
ACAAATTCGGACTCTTGGAAAGAAGTGAAGTCTGATAGTCGCTTAATTAAATTGAATACC
TGCTTCTGTAATGTAATTGTTGAAGGGCTTCCTTACTGGGTTGCCAAGGACTTGGATGGA
AGTACTGTTCTTGCCTCGTTTGTTTGGAGTATAGAGAAGTTCTTCATAATTCCTTTACCG
GAAGAAGTGATAACTAAATCTCAAACTTTTGTGGCCACGAACTATCATGGGTCATTTGCA
TTGCTTGCATACTCTTCACCCAGCAAATTCAAGGCGTGTATTGACGTTTGGGAGATTGAA
CTTGATATCTCTGCAGAGGAGTGTGACTGGAAAAAGAAGGACACCTTTCACACGGATTTT
GGCTTTTCAATGCATTGGGGTCTTACTGGTGGAGGTATAGTAGTTGAAAATGCTCCAAAC
ATGCCGTTCTTGTTCAACGTGACAACAAAACAGAGGTGGGAAATGGGAATAAATCCTATT
CTTTCACTTTCCAACTATACTGAGAGCCTTGTATCAATTAAGGGGTTCAGGCGTGTCCGC
AATCAACTGAAAAGGAAGAGGAAGGCTTCAAATCCAGTAAGAGCAAGATTGAGCTAA