Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073075
CDS Infomation

pacid=37426860 polypeptide=PGSC0003DMP400049447 locus=PGSC0003DMG400028420 ID=PGSC0003DMT400073075.v4.03 annot-version=v4.03
Sequence

ATGGAATCTTGTTATTTCACTGTAACAAAGCCATCATCATCATCTTCAACTATTCTGAAT
TTTCAGGGTGTTTCATCTTTTGGTGGAAGATCGTCTCAGAAATCCTTAGGTGCCCCATCT
TATCTTTCCTGGCCATTATCTAGACCTGAAAAGAAACATCAAAATTTTGTTTACAGGCAG
AAGACGTTTAAGGGTGCCATATTGGCAGAAGCTGGAAAACAAGGTTGGGATTTTGGCAGA
TTTATAAAGACATTGTATTTTTTTAATGGCCCTCCTTCCCCTGCAAAGTTTTTTGAATCA
CTGATTGAGAAACTAACTGGTCCATCACCTAGTAAACCAGTTAACTCGATGGATTCTTCT
GGAATTACCCTGGTAACTGGAGCCACTGGTGGTGTTGGGAGAAGAGTGGTGGACGTATTA
CGCAACAAAAAATTGTCTGTCCGAGTACTCGTCAGAAATGAAGAGAAGGCAAGAAGAATG
CTTGGTGAAGATGTTGACCTGGTTGTTGGAGATGTTACCAAAGCAAGCACTCTGCTTCCT
GAGTACTTCAAAGGAGTAACGAGCGTAATTAATGCTGTTTCTGCCATTGTTGGCCCGAAG
GAAGGGGATACCCCTGACAGGGAAAAATACAGTCAGGGAATCAAGTTCTTTGAACCCGAG
ATTAAAGGTGACTCACCTGAAATGGTGGAGTACATTGGAATGAAGAATTTAATAAATGCT
GTTAAAGAAAATGTTTGCCTTCGCACAGGAAAACTACTATTTGGATATGAAGGTAATTCA
TTTAAAGAACTTCCTTGGGGGGCTTTGGATGATGTTGTGATGGGTGGAGTGAGTCAAAGT
ACATTCCAGATAGATCTAACTGGTGGGGAAAATGGTGGACCAACAGGACTCTTCAAAGGT
ATTGTTACCACTGCTAACAACGGGGGGTTTGCCAGTATTAGGACAAAGAACTTTTCTGAA
CCCGAAGACCTTTCTGCTTATGATGGTTTAGAGTTGCGCCTTAAAGGTGATGGCCGTCGT
TATAAGCTTATTGTTCGCACTAGCAGTGATTGGGATACTGTGGGTTATACATCAATCTTT
GATACCGTTGAGGGTTGGCAATTGGTTCGTTTGCCTTTTTCTTCTTTGAGGCCTATATTC
CGTGCACGAACCGTACTAGATGCATCGCCTTTTGACCCCAGTCAAATCACATCATTACAG
CTTATGTTCAGCAAATTCGAATCTGATGGTAAACTGAATCCAACATTCAAAGAAGGTCCC
TTTGAACTTCCTGTATCATGCATTCAAGCTTATCTTAAAGATCCCATTACTCCCAGGTTT
GTACATGTGAGTTCTGCTGGTGTAACTAGACCAGAAAGACCAGGAATTGATTTAAGCAAA
CAGCCTCCAGCTGTGCGATTGAACAAGGAATTGGGCTTCATCCTGACATTCAAGTTAAAG
GGGGAGGATGAGATTCGAGAATCTGGGATACCATATACAATAGTCAGGCCTTGTGCCTTA
ACTGAGGAGCCTGCAGGAGCTGATCTCATTTTCGATCAAGGCGACAATATCACGGGGAAG
ATATCCCGTGAAGAAGTTGCTCGAATATGTGTGGCAGCTCTGAAAAGTCCCTATGCATGT
GACAAAACATTTGAGGTTAAAAGTGTCATTCCATTTAGTGAGCCGTACACAGTGGATCCA
GAAAACCCTCCTCCGGAGAAAGATTACAATGAATACTTCAAGACTCTGAAAGATGGCATC
ACTGGGAAAGAAAGCCTAGAGAAAACACCTATCTCTGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049447
PEP Infomation

pacid=37426860 transcript=PGSC0003DMT400073075 locus=PGSC0003DMG400028420 ID=PGSC0003DMT400073075.v4.03 annot-version=v4.03
Sequence

MESCYFTVTKPSSSSSTILNFQGVSSFGGRSSQKSLGAPSYLSWPLSRPEKKHQNFVYRQ
KTFKGAILAEAGKQGWDFGRFIKTLYFFNGPPSPAKFFESLIEKLTGPSPSKPVNSMDSS
GITLVTGATGGVGRRVVDVLRNKKLSVRVLVRNEEKARRMLGEDVDLVVGDVTKASTLLP
EYFKGVTSVINAVSAIVGPKEGDTPDREKYSQGIKFFEPEIKGDSPEMVEYIGMKNLINA
VKENVCLRTGKLLFGYEGNSFKELPWGALDDVVMGGVSQSTFQIDLTGGENGGPTGLFKG
IVTTANNGGFASIRTKNFSEPEDLSAYDGLELRLKGDGRRYKLIVRTSSDWDTVGYTSIF
DTVEGWQLVRLPFSSLRPIFRARTVLDASPFDPSQITSLQLMFSKFESDGKLNPTFKEGP
FELPVSCIQAYLKDPITPRFVHVSSAGVTRPERPGIDLSKQPPAVRLNKELGFILTFKLK
GEDEIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVARICVAALKSPYAC
DKTFEVKSVIPFSEPYTVDPENPPPEKDYNEYFKTLKDGITGKESLEKTPISV*

Transcript Sequence

Transcript ID

PGSC0003DMT400073075
Transcript Infomation

pacid=37426860 locus=PGSC0003DMG400028420 ID=PGSC0003DMT400073075.v4.03 annot-version=v4.03
Sequence

ATGGAATCTTGTTATTTCACTGTAACAAAGCCATCATCATCATCTTCAACTATTCTGAAT
TTTCAGGGTGTTTCATCTTTTGGTGGAAGATCGTCTCAGAAATCCTTAGGTGCCCCATCT
TATCTTTCCTGGCCATTATCTAGACCTGAAAAGAAACATCAAAATTTTGTTTACAGGCAG
AAGACGTTTAAGGGTGCCATATTGGCAGAAGCTGGAAAACAAGGTTGGGATTTTGGCAGA
TTTATAAAGACATTGTATTTTTTTAATGGCCCTCCTTCCCCTGCAAAGTTTTTTGAATCA
CTGATTGAGAAACTAACTGGTCCATCACCTAGTAAACCAGTTAACTCGATGGATTCTTCT
GGAATTACCCTGGTAACTGGAGCCACTGGTGGTGTTGGGAGAAGAGTGGTGGACGTATTA
CGCAACAAAAAATTGTCTGTCCGAGTACTCGTCAGAAATGAAGAGAAGGCAAGAAGAATG
CTTGGTGAAGATGTTGACCTGGTTGTTGGAGATGTTACCAAAGCAAGCACTCTGCTTCCT
GAGTACTTCAAAGGAGTAACGAGCGTAATTAATGCTGTTTCTGCCATTGTTGGCCCGAAG
GAAGGGGATACCCCTGACAGGGAAAAATACAGTCAGGGAATCAAGTTCTTTGAACCCGAG
ATTAAAGGTGACTCACCTGAAATGGTGGAGTACATTGGAATGAAGAATTTAATAAATGCT
GTTAAAGAAAATGTTTGCCTTCGCACAGGAAAACTACTATTTGGATATGAAGGTAATTCA
TTTAAAGAACTTCCTTGGGGGGCTTTGGATGATGTTGTGATGGGTGGAGTGAGTCAAAGT
ACATTCCAGATAGATCTAACTGGTGGGGAAAATGGTGGACCAACAGGACTCTTCAAAGGT
ATTGTTACCACTGCTAACAACGGGGGGTTTGCCAGTATTAGGACAAAGAACTTTTCTGAA
CCCGAAGACCTTTCTGCTTATGATGGTTTAGAGTTGCGCCTTAAAGGTGATGGCCGTCGT
TATAAGCTTATTGTTCGCACTAGCAGTGATTGGGATACTGTGGGTTATACATCAATCTTT
GATACCGTTGAGGGTTGGCAATTGGTTCGTTTGCCTTTTTCTTCTTTGAGGCCTATATTC
CGTGCACGAACCGTACTAGATGCATCGCCTTTTGACCCCAGTCAAATCACATCATTACAG
CTTATGTTCAGCAAATTCGAATCTGATGGTAAACTGAATCCAACATTCAAAGAAGGTCCC
TTTGAACTTCCTGTATCATGCATTCAAGCTTATCTTAAAGATCCCATTACTCCCAGGTTT
GTACATGTGAGTTCTGCTGGTGTAACTAGACCAGAAAGACCAGGAATTGATTTAAGCAAA
CAGCCTCCAGCTGTGCGATTGAACAAGGAATTGGGCTTCATCCTGACATTCAAGTTAAAG
GGGGAGGATGAGATTCGAGAATCTGGGATACCATATACAATAGTCAGGCCTTGTGCCTTA
ACTGAGGAGCCTGCAGGAGCTGATCTCATTTTCGATCAAGGCGACAATATCACGGGGAAG
ATATCCCGTGAAGAAGTTGCTCGAATATGTGTGGCAGCTCTGAAAAGTCCCTATGCATGT
GACAAAACATTTGAGGTTAAAAGTGTCATTCCATTTAGTGAGCCGTACACAGTGGATCCA
GAAAACCCTCCTCCGGAGAAAGATTACAATGAATACTTCAAGACTCTGAAAGATGGCATC
ACTGGGAAAGAAAGCCTAGAGAAAACACCTATCTCTGTATAA