Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073054
CDS Infomation

pacid=37428072 polypeptide=PGSC0003DMP400049432 locus=PGSC0003DMG400028413 ID=PGSC0003DMT400073054.v4.03 annot-version=v4.03
Sequence

ATGGAGCCCCATCACAATTCGGATTCCAAGTTTGCTACTCCAGGAGAAGTTGATCCTTCT
TCAACTTCTTATTCTAGGGTTTCTAATCCACTTCTTCAATCGGACTGTAGTAAGTTTGGA
GATAGCACAGGCCTGGATGATTTTGAGCCAGTCATATGTTCAAACATTGTAAAAACGGGT
AAGCATGAAGAATATAACAGAGTAGCTGTACACCTAATGAATGAAATTCCTGAGAACACA
AGTTCGATGAGTCGTCTAGATACTCAAGCCGAGGAACTTTTCAGTAAACAGTCATTTCAA
GACACTCGAGAAGCTAGTGAGAGGTATCATATGGACGGCTGGAAAGAGGAATCTGAAGAA
GATTCTATAACCCTGAGACAGAACAATATCTTGAGGAGTTCTGAGAAGATTATCAGCAGC
AACTGGGATGAAAGAGGAAAATGTGGTTCTGAATCATTTGGTCAAAGTGCAGGTCATGTA
AACAACGATAAGAGTTATATCATGGGCAAGCCCATGGGTGGACAGCAAGAAACTGATCAT
GATTCACCTTTGTGCACAAAAGAAAACTATGAGAAGGGGGCACACACAACTAATGGAATG
GTTAAAGCTGAAGTTTCTAATGTTAATTTAATTCAAGAGACTAACGAAAGTGACATAAAA
AGAAACCTTCTTTACCCACAATTAACTGAAAATATAGAATGTGAAACTCAGTCATCTCAA
AATGTAGACGGAAGTATGTGCCACCAAAATCAAGAAAAATATTTCTGCTACGATTCACCA
CTTTTTGGTGAAACTGGGTCTTGGATACCTGTATCAGTTCCTCCAATGTCGAAGAGTGAG
CATGATGAGTGGAGTAGAGGCTTCTGCTCAAATGGAAGGTACCTTCCCGAAGGTGACACA
GATTGGAATCAGTGCATGGGGGAAGACAAGGAGTTGACAATGTGGGATGTGGTTCTGGAT
ATGTTACTCGCAGCACGAGGAAAAGTGCATTCTCTTGCGTCTGGTGATATAGTAGGCAAC
ATGGCGTGGATATCAAGCCATCTCGTTGAGCAGGCTTGGAAAGAGATGGCTCAAACCCTC
ACAGAAGCTAATTTTGGTAATGCCCAGGAAATTCTTGAGGCAGATCCTCCTAAATGGTTG
CCTGACAGTGCATCTTCCACTTGTATGTTATGTAATGTGCGGTTCCACCCTATCATGTGT
AGCAGGCATCATTGTAGATTTTGTGGAGGATTATTTTGCAATGAATGTACTAAAGGAAGG
AGTTTGCTCCCTGAAAAATTTTGCACTGGGGAACCACAACGAGTATGTGATGTATGTTGT
GTACGGCTTGAGTCTGTGCAGCCATACCTAATGGATCAAGTAAGCCGTGCTGCTCAGTTG
CCAACCCATGACCTCACTGACTTGAGCACATTGAGATCCTGGGTAAACTTCCCGTGGGGA
CAGTCAATGGAATACGAAATTTATAAGGCCGCTAACACTATTCGGGGATATGAAAAGATT
GGTATATTGAGTTCTGAGAAGAAAATTCCAGAAGCTATTCTACAAAATGCAAGAGGCCTT
GCCATACTTACAGTCGTGAAAGTTGGAGTGATGGTAACCTACAATGTCGGAACTGGATTG
GTGATTGCACGTAGAGAAGATGGTTCGTGGTCTCCCCCTTCGGCCATTTCTTCTTTCGGT
GTGGGATGGGGTGCTCAGGCTGGTGGAGAACTTACTGACTTCATTATTGTCCTGAGAACT
ACTGATGCTGTCAAAACTTTTGGCGGTGATGCACATCTTTCATTTGGAGCTGGTGTGAGT
GCTGCTGCGGGGATCATTGGACGAACTGCCGAAGCTGATCTTCGTGCCGGTACTGGTGGC
TATGCCGCTTGTTATACATACAGCTGCAGTAAAGGTGCCTTTGTTGGGTGTTCCCTACAA
GGGAGTGTTGTGACTACCCGAACACGGGAAAACTCCAGATTTTATGGTAGCCAGTCAATA
AAAGCTTCAGAAATTCTCCTTGGCTCATTGCCAAATCCCCCTGCTGCAGCCACCCTATAT
CGTGCACTCACTGATTTATACCAGAAGCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049432
PEP Infomation

pacid=37428072 transcript=PGSC0003DMT400073054 locus=PGSC0003DMG400028413 ID=PGSC0003DMT400073054.v4.03 annot-version=v4.03
Sequence

MEPHHNSDSKFATPGEVDPSSTSYSRVSNPLLQSDCSKFGDSTGLDDFEPVICSNIVKTG
KHEEYNRVAVHLMNEIPENTSSMSRLDTQAEELFSKQSFQDTREASERYHMDGWKEESEE
DSITLRQNNILRSSEKIISSNWDERGKCGSESFGQSAGHVNNDKSYIMGKPMGGQQETDH
DSPLCTKENYEKGAHTTNGMVKAEVSNVNLIQETNESDIKRNLLYPQLTENIECETQSSQ
NVDGSMCHQNQEKYFCYDSPLFGETGSWIPVSVPPMSKSEHDEWSRGFCSNGRYLPEGDT
DWNQCMGEDKELTMWDVVLDMLLAARGKVHSLASGDIVGNMAWISSHLVEQAWKEMAQTL
TEANFGNAQEILEADPPKWLPDSASSTCMLCNVRFHPIMCSRHHCRFCGGLFCNECTKGR
SLLPEKFCTGEPQRVCDVCCVRLESVQPYLMDQVSRAAQLPTHDLTDLSTLRSWVNFPWG
QSMEYEIYKAANTIRGYEKIGILSSEKKIPEAILQNARGLAILTVVKVGVMVTYNVGTGL
VIARREDGSWSPPSAISSFGVGWGAQAGGELTDFIIVLRTTDAVKTFGGDAHLSFGAGVS
AAAGIIGRTAEADLRAGTGGYAACYTYSCSKGAFVGCSLQGSVVTTRTRENSRFYGSQSI
KASEILLGSLPNPPAAATLYRALTDLYQKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400073054
Transcript Infomation

pacid=37428072 locus=PGSC0003DMG400028413 ID=PGSC0003DMT400073054.v4.03 annot-version=v4.03
Sequence

ATGGAGCCCCATCACAATTCGGATTCCAAGTTTGCTACTCCAGGAGAAGTTGATCCTTCT
TCAACTTCTTATTCTAGGGTTTCTAATCCACTTCTTCAATCGGACTGTAGTAAGTTTGGA
GATAGCACAGGCCTGGATGATTTTGAGCCAGTCATATGTTCAAACATTGTAAAAACGGGT
AAGCATGAAGAATATAACAGAGTAGCTGTACACCTAATGAATGAAATTCCTGAGAACACA
AGTTCGATGAGTCGTCTAGATACTCAAGCCGAGGAACTTTTCAGTAAACAGTCATTTCAA
GACACTCGAGAAGCTAGTGAGAGGTATCATATGGACGGCTGGAAAGAGGAATCTGAAGAA
GATTCTATAACCCTGAGACAGAACAATATCTTGAGGAGTTCTGAGAAGATTATCAGCAGC
AACTGGGATGAAAGAGGAAAATGTGGTTCTGAATCATTTGGTCAAAGTGCAGGTCATGTA
AACAACGATAAGAGTTATATCATGGGCAAGCCCATGGGTGGACAGCAAGAAACTGATCAT
GATTCACCTTTGTGCACAAAAGAAAACTATGAGAAGGGGGCACACACAACTAATGGAATG
GTTAAAGCTGAAGTTTCTAATGTTAATTTAATTCAAGAGACTAACGAAAGTGACATAAAA
AGAAACCTTCTTTACCCACAATTAACTGAAAATATAGAATGTGAAACTCAGTCATCTCAA
AATGTAGACGGAAGTATGTGCCACCAAAATCAAGAAAAATATTTCTGCTACGATTCACCA
CTTTTTGGTGAAACTGGGTCTTGGATACCTGTATCAGTTCCTCCAATGTCGAAGAGTGAG
CATGATGAGTGGAGTAGAGGCTTCTGCTCAAATGGAAGGTACCTTCCCGAAGGTGACACA
GATTGGAATCAGTGCATGGGGGAAGACAAGGAGTTGACAATGTGGGATGTGGTTCTGGAT
ATGTTACTCGCAGCACGAGGAAAAGTGCATTCTCTTGCGTCTGGTGATATAGTAGGCAAC
ATGGCGTGGATATCAAGCCATCTCGTTGAGCAGGCTTGGAAAGAGATGGCTCAAACCCTC
ACAGAAGCTAATTTTGGTAATGCCCAGGAAATTCTTGAGGCAGATCCTCCTAAATGGTTG
CCTGACAGTGCATCTTCCACTTGTATGTTATGTAATGTGCGGTTCCACCCTATCATGTGT
AGCAGGCATCATTGTAGATTTTGTGGAGGATTATTTTGCAATGAATGTACTAAAGGAAGG
AGTTTGCTCCCTGAAAAATTTTGCACTGGGGAACCACAACGAGTATGTGATGTATGTTGT
GTACGGCTTGAGTCTGTGCAGCCATACCTAATGGATCAAGTAAGCCGTGCTGCTCAGTTG
CCAACCCATGACCTCACTGACTTGAGCACATTGAGATCCTGGGTAAACTTCCCGTGGGGA
CAGTCAATGGAATACGAAATTTATAAGGCCGCTAACACTATTCGGGGATATGAAAAGATT
GGTATATTGAGTTCTGAGAAGAAAATTCCAGAAGCTATTCTACAAAATGCAAGAGGCCTT
GCCATACTTACAGTCGTGAAAGTTGGAGTGATGGTAACCTACAATGTCGGAACTGGATTG
GTGATTGCACGTAGAGAAGATGGTTCGTGGTCTCCCCCTTCGGCCATTTCTTCTTTCGGT
GTGGGATGGGGTGCTCAGGCTGGTGGAGAACTTACTGACTTCATTATTGTCCTGAGAACT
ACTGATGCTGTCAAAACTTTTGGCGGTGATGCACATCTTTCATTTGGAGCTGGTGTGAGT
GCTGCTGCGGGGATCATTGGACGAACTGCCGAAGCTGATCTTCGTGCCGGTACTGGTGGC
TATGCCGCTTGTTATACATACAGCTGCAGTAAAGGTGCCTTTGTTGGGTGTTCCCTACAA
GGGAGTGTTGTGACTACCCGAACACGGGAAAACTCCAGATTTTATGGTAGCCAGTCAATA
AAAGCTTCAGAAATTCTCCTTGGCTCATTGCCAAATCCCCCTGCTGCAGCCACCCTATAT
CGTGCACTCACTGATTTATACCAGAAGCTCTGA