Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400073008
CDS Infomation

pacid=37442466 polypeptide=PGSC0003DMP400049401 locus=PGSC0003DMG400028396 ID=PGSC0003DMT400073008.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTGGTAAGGAATTCAAAAAGGAAATGGTCCCAGAGTGGATAGAAGCTTATGTG
GACTACACTGGACTCAAACAAATATTACAGGAGATCCGCCGTTTCAAGGAAAGCAATCAG
CATCCAACGCCTGCAACATCTTTAGATCAGAGGTTGGCATTGTATCGCAACTTTAGTGGT
CTAAATCTACAAGGCAGTGTTCAGAATACTAGTGATATTGAGAACCAGGTGATAGCAGTA
AACACGGTGCCACACGAAAACTACAGAAAATTTTACAAAACCAAGTTCCTGGCATCTCCT
GAAGGAGCAGAAAATGAAATTAGCTTCTTTGACAAACTAGACCATGAATTCAACAAGGTT
AATACCTTCTATAAGGACAAGGTGGATGAAGTCATGAGGGAAGTAACTTTGCTGAATAAA
CAGATGGATGCTTTGATCGCGTTACGTATCAAGGTAATGGATCCGGGTTTCAATGCATTT
CCTTCCCTTCAAAGTCTTTCCTTGGACATTAACAATTCAACACCTTCGAGGATCACATCT
CCTCTCAGAATGACAGTTGTAGATACAGATGATATGCCTGTCAGTCCAAGTTTTGACCCC
ACTTATGGAAGACAGGTTTCTATGACTAATGCTTCATATCCAAAGCTTCCCATCAACCGC
AATTCTTTAAGAGAGAACAGAGATACTGATTCACAAAAAACAGATCCTCTTGAAATCCTA
GATCATGTTAAGATTGTTAATACATTTGAAAGTCCCATATCAACTATAAGAGGTGTCTTG
AGCGAATCCAAGGAGAATGATTTGAGTTATAAGAAAGAGGAACTAAAGAAGGTTGAACAT
AGGCTGAAGCTTATTTTCATTGAGTTCTATCAAAAACTTAGCCATCTAAAACACTTCAGC
TATATGAACCTGTCTGCGTTCTCCAAGATCCTCAAAAAATATGAAAAGATTACATCTAGA
AAAGCAGCAAGATCATACTTGAAAATGGTGGATAACTCTTATCTTGGGAGCTCTGAGGAG
GTTACCAGTCTTCTGGACAGGGTGGAGACCACCTTCATCAAGCATTTTTCGCAGTCGAAC
CGCAGAGAAGGTATGAAGATATTGCGGCCAAAGCATAAAAGAGAAAAACATCGTATAACA
TTCATGTCAGGCTTCTTTTCTGGTTGCTCAATTGCTCTACTAGTTGCTGTAATTCTATTA
AGAGATGACAGAAAATTGATAGATAAAGATGAAGGCACCTCTTATTTGGACAAGATAGTT
CCACTTTACAGTTTTTATGCATACATTGTGTTGCATATGCTTTTATATGCTGCAAACATA
TATTTCTGGAGGCACTACAAAATCAACTATGCATTTATCTTTGGTTTCAAGCAAGGGACC
GAGTTAAGCTATAGGGAAGTCTTTCTTCTTAGCAATGGTCTAGCAATGCTCGTCCTTGCC
GCTCTCCTGATGCATCTGCACATGAATTCAAGAGCTGAAGTGTATGGTACACATATTGAA
TATGTTCCTCTGGGATTGATAATGGTACTTCTTTCCATTACTTTCTGCCCGTTTAACATC
ATTTATCGCTCAAGTCGTTGGTTCCTTATAAGATGCGTGTTCCGCTGTATCTGTGCTCCT
CTTTACAAGGTTACTCTTCCAGATTTCTTTCTAGCAGACCAGCTGACTAGCCAGGTTGAA
GCAATAAGGAGTTTGGAGTATTACATTTGCTATTATACTTGGATTAAACCTTCGCATGGA
CATAATATGTGCCAAAGTCACAATGTCTATAACATATTTTACTTCATTCTAGCTATCATA
CCATATTGGTTTCGGTTTTTTCAGTGTGTCCGTCGACTGTTTGAAGAAAAGGATCAAGCA
CAGGCATACAATGGCTTGAGATACTTTTTGACAATTCTGGCAGTCGTTATTAAAACAGCT
TATGTACTGAGAAAGAGTTTGACTTGGGAGGTGTTGGTTATACTGAGCTCACTTATCACA
ACTCTTTTCAACACATACTGGGATATAGTTGTCGATTGGGGGCTGTTGAGAAGGAAGTCC
AAGAACAAGTTCTTGCGGGATAAGCTCATACTGCACCATAAAAGTATATACTTCACAGCC
ATGGTCTTGGATGTTTTGCTCAGATTTGCCTGGCTACAACTGGTATTAAGATTCAACGTG
CACTCTTTGCAAGGAAGTACTGTCTCAAGCATATTTGCTTGCTTAGAAGTGATTCGACGT
GGCATGTGGAATTTTTTCAGGTTGGAAAATGAGCACCTGAACAATGTGGGGAAATACCGG
GCATTCAAGTCAGTACCACTTCCTTTCGCGTACCATGAAGAGGATGATCACAAAGAAGAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400049401
PEP Infomation

pacid=37442466 transcript=PGSC0003DMT400073008 locus=PGSC0003DMG400028396 ID=PGSC0003DMT400073008.v4.03 annot-version=v4.03
Sequence

MKFGKEFKKEMVPEWIEAYVDYTGLKQILQEIRRFKESNQHPTPATSLDQRLALYRNFSG
LNLQGSVQNTSDIENQVIAVNTVPHENYRKFYKTKFLASPEGAENEISFFDKLDHEFNKV
NTFYKDKVDEVMREVTLLNKQMDALIALRIKVMDPGFNAFPSLQSLSLDINNSTPSRITS
PLRMTVVDTDDMPVSPSFDPTYGRQVSMTNASYPKLPINRNSLRENRDTDSQKTDPLEIL
DHVKIVNTFESPISTIRGVLSESKENDLSYKKEELKKVEHRLKLIFIEFYQKLSHLKHFS
YMNLSAFSKILKKYEKITSRKAARSYLKMVDNSYLGSSEEVTSLLDRVETTFIKHFSQSN
RREGMKILRPKHKREKHRITFMSGFFSGCSIALLVAVILLRDDRKLIDKDEGTSYLDKIV
PLYSFYAYIVLHMLLYAANIYFWRHYKINYAFIFGFKQGTELSYREVFLLSNGLAMLVLA
ALLMHLHMNSRAEVYGTHIEYVPLGLIMVLLSITFCPFNIIYRSSRWFLIRCVFRCICAP
LYKVTLPDFFLADQLTSQVEAIRSLEYYICYYTWIKPSHGHNMCQSHNVYNIFYFILAII
PYWFRFFQCVRRLFEEKDQAQAYNGLRYFLTILAVVIKTAYVLRKSLTWEVLVILSSLIT
TLFNTYWDIVVDWGLLRRKSKNKFLRDKLILHHKSIYFTAMVLDVLLRFAWLQLVLRFNV
HSLQGSTVSSIFACLEVIRRGMWNFFRLENEHLNNVGKYRAFKSVPLPFAYHEEDDHKEE
*

Transcript Sequence

Transcript ID

PGSC0003DMT400073008
Transcript Infomation

pacid=37442466 locus=PGSC0003DMG400028396 ID=PGSC0003DMT400073008.v4.03 annot-version=v4.03
Sequence

ATGAAGTTTGGTAAGGAATTCAAAAAGGAAATGGTCCCAGAGTGGATAGAAGCTTATGTG
GACTACACTGGACTCAAACAAATATTACAGGAGATCCGCCGTTTCAAGGAAAGCAATCAG
CATCCAACGCCTGCAACATCTTTAGATCAGAGGTTGGCATTGTATCGCAACTTTAGTGGT
CTAAATCTACAAGGCAGTGTTCAGAATACTAGTGATATTGAGAACCAGGTGATAGCAGTA
AACACGGTGCCACACGAAAACTACAGAAAATTTTACAAAACCAAGTTCCTGGCATCTCCT
GAAGGAGCAGAAAATGAAATTAGCTTCTTTGACAAACTAGACCATGAATTCAACAAGGTT
AATACCTTCTATAAGGACAAGGTGGATGAAGTCATGAGGGAAGTAACTTTGCTGAATAAA
CAGATGGATGCTTTGATCGCGTTACGTATCAAGGTAATGGATCCGGGTTTCAATGCATTT
CCTTCCCTTCAAAGTCTTTCCTTGGACATTAACAATTCAACACCTTCGAGGATCACATCT
CCTCTCAGAATGACAGTTGTAGATACAGATGATATGCCTGTCAGTCCAAGTTTTGACCCC
ACTTATGGAAGACAGGTTTCTATGACTAATGCTTCATATCCAAAGCTTCCCATCAACCGC
AATTCTTTAAGAGAGAACAGAGATACTGATTCACAAAAAACAGATCCTCTTGAAATCCTA
GATCATGTTAAGATTGTTAATACATTTGAAAGTCCCATATCAACTATAAGAGGTGTCTTG
AGCGAATCCAAGGAGAATGATTTGAGTTATAAGAAAGAGGAACTAAAGAAGGTTGAACAT
AGGCTGAAGCTTATTTTCATTGAGTTCTATCAAAAACTTAGCCATCTAAAACACTTCAGC
TATATGAACCTGTCTGCGTTCTCCAAGATCCTCAAAAAATATGAAAAGATTACATCTAGA
AAAGCAGCAAGATCATACTTGAAAATGGTGGATAACTCTTATCTTGGGAGCTCTGAGGAG
GTTACCAGTCTTCTGGACAGGGTGGAGACCACCTTCATCAAGCATTTTTCGCAGTCGAAC
CGCAGAGAAGGTATGAAGATATTGCGGCCAAAGCATAAAAGAGAAAAACATCGTATAACA
TTCATGTCAGGCTTCTTTTCTGGTTGCTCAATTGCTCTACTAGTTGCTGTAATTCTATTA
AGAGATGACAGAAAATTGATAGATAAAGATGAAGGCACCTCTTATTTGGACAAGATAGTT
CCACTTTACAGTTTTTATGCATACATTGTGTTGCATATGCTTTTATATGCTGCAAACATA
TATTTCTGGAGGCACTACAAAATCAACTATGCATTTATCTTTGGTTTCAAGCAAGGGACC
GAGTTAAGCTATAGGGAAGTCTTTCTTCTTAGCAATGGTCTAGCAATGCTCGTCCTTGCC
GCTCTCCTGATGCATCTGCACATGAATTCAAGAGCTGAAGTGTATGGTACACATATTGAA
TATGTTCCTCTGGGATTGATAATGGTACTTCTTTCCATTACTTTCTGCCCGTTTAACATC
ATTTATCGCTCAAGTCGTTGGTTCCTTATAAGATGCGTGTTCCGCTGTATCTGTGCTCCT
CTTTACAAGGTTACTCTTCCAGATTTCTTTCTAGCAGACCAGCTGACTAGCCAGGTTGAA
GCAATAAGGAGTTTGGAGTATTACATTTGCTATTATACTTGGATTAAACCTTCGCATGGA
CATAATATGTGCCAAAGTCACAATGTCTATAACATATTTTACTTCATTCTAGCTATCATA
CCATATTGGTTTCGGTTTTTTCAGTGTGTCCGTCGACTGTTTGAAGAAAAGGATCAAGCA
CAGGCATACAATGGCTTGAGATACTTTTTGACAATTCTGGCAGTCGTTATTAAAACAGCT
TATGTACTGAGAAAGAGTTTGACTTGGGAGGTGTTGGTTATACTGAGCTCACTTATCACA
ACTCTTTTCAACACATACTGGGATATAGTTGTCGATTGGGGGCTGTTGAGAAGGAAGTCC
AAGAACAAGTTCTTGCGGGATAAGCTCATACTGCACCATAAAAGTATATACTTCACAGCC
ATGGTCTTGGATGTTTTGCTCAGATTTGCCTGGCTACAACTGGTATTAAGATTCAACGTG
CACTCTTTGCAAGGAAGTACTGTCTCAAGCATATTTGCTTGCTTAGAAGTGATTCGACGT
GGCATGTGGAATTTTTTCAGGTTGGAAAATGAGCACCTGAACAATGTGGGGAAATACCGG
GCATTCAAGTCAGTACCACTTCCTTTCGCGTACCATGAAGAGGATGATCACAAAGAAGAA
TAA