Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072979
CDS Infomation

pacid=37444122 polypeptide=PGSC0003DMP400049378 locus=PGSC0003DMG402028385 ID=PGSC0003DMT400072979.v4.03 annot-version=v4.03
Sequence

ATGGGAACACAAGTGCACTATAAAGGATTCTCACCAAGCTATTACTCTATGAGAGACCTT
AATGAGGATGCTAACAGCAGCAGTTGGCCCCTATTTTATGGAGATAAGACTTTACCAAAC
GGGCAATATTGTAATGGTTTCACGTCGAGGACTGTAACTGATGCATATCCAGGGTATGAT
AAGGACATTCTAAAGCAGAAAATGATTGAACACGAGGCCATATTCAGGAATCAGGTGGTG
GAACTTCATCGCCTTTACAGAATTCAAAGGGACATGATGGACGAATTTAAAAGGAAGGAA
ATGCATAAACATCGCTCATCAATGGAGCCATCATGTTCATCCAGTCACCTAGGACCTCAA
GTACCATCTGAGGATGTCCGGAAATGGAACATCACAAACCTTCCCTTGGAAAATTCTAGT
TATACTAGACCATCTACATCTGGTACTGAAATTGTTAATTCTCCTTTTAGTTCTTCAAAA
GGAGATTGTGTACAGCCCGATCGAGTTCTAATGCAAAATGATTATTCTTCGAAAGCCTGT
GATGTTTTGGAGGCTAGGCCCTCAAAGGTCCGGAAAAAGTTGTTTGATCTTCACCTTCCA
GCCAATGATTACTTAGATACAGAAGAAGGTGGGCAGTTGCGAGATAATGCAGGATCTTTA
CATCCTAGTTATCCTGCTAATGTAGATTATGTAGTTACTCAAGAGAGTGGAACAAAATTG
TTTCTTGGTGGTGGTGCAAAGGGTGATCGCCGAAAAGATACTTCAACATCCAATTCGTGT
TTGAGAAGCTCAATTGGATTGGCTGACCTAAATGAACCAGCGCAGCTTGATGAAGCAATC
GATCCTGTTGATTTTCTTGGTTATGGTAATAATCATAAAGAGACTAGAAGCATAAATGCT
TCTGCAAAATCAAATTCACCGTTTGTGGCTTTGCCTTGGAATTCCAATTGTGCAAGCCCA
AATGAGTCTTTAAGTAACCGATACGATCGCAGTAGAGGCAAAGACAGGGAGTGGTTAACT
TCAGCACATGAAACAGGTAACATCAAAGGCAGCTCAGTTTCATTACCAAGAGGTCTCGAA
GAAGAAAAGATCCCTGCAGCTTCCCATCAAGCACCAGTAATGATTAACAAAGCCTATCAA
GCTCCGGGCGCTTATCTAGTTCACCATATTAAGGATGGCATTTGGAAAGATAGAACAGGA
CATAGTTTAGATATGTCTCACAGAAATGGTGAGCAGTCTAATTATACTCAAGTGGGACCA
TTTGTTACTTCCAAGATGGCTAGTCCATTTCCATGTGCAAGTTCCTCTGAATTTAGCAGT
TCGTGGCCGCATTCTGTCTCTTCTTGGGAGAAGCCAAACGGTAGCTTTACTCAGAGGTTA
TCCTCATTGCATACAAATTCATTTTTCAACTCATCTGCAGCAGTTGGTAAGGGTTCACAG
TCATCTCAGAGACAAATTGGAGACTATTGGCAAGCTAATGGTGGCAGTTCTAGGGTGCGT
CCAGGCTGTGCCAGTGAGCTACCCAACCGAAGTGTTTTCTACCATGGGTCCTCATCTGGG
ACGAAAGAATCACCAATTCACGTCCCTTCAGGTGCTTTTGACTCTTTGAGCTACATTAAG
GGGGACCGGTTTACATCTGAACATTCCTCTAATAATGCATTCGAGAATTTTCTCATTAGT
TCTAACAATACGGATGTGAAATCTGCAAAAGGCTTCAACTTAAATGTGCTAGCAACAAGT
GCACTCAGCGAGGAACCTCCCAGGCAAGATGTTGAGTTTAGTAATGAAAAAAGAGAGCGT
CAAGATCCTGTGACAGTTTTGCCGTGGCTTAAAGCTAAAGCAAATTATAAAAATGAGGAC
GTCAATACAAGGATAGGTGGAACTTCAGCAGATTCAGGATTTGTCCAGGCTTACTCAAAC
TCTCCTTTCTGCCAGAGTGATCCATCAGCTTTGGAACATCACCATATGAAGACCGCAAAA
GAAGTGGTCGAGACGCCACATGTAAGGAAAATCCTTGGTGTTCCAATCCTCGATATTCCC
GTAGCTTCCAGAAATGAGTCGTCATCATCACTTGTTTTTGCTTCTGCTAATCTTCGTTCC
TCTCCTGAGAGAAAAACTATCAAACAAGAGAGGAGTATGGTGATCGACATTAACGTGGCT
TGTGACCTTTCTATGCTTGAGCCTGAGGAACCTTATGTTGTAGAACAAATTGCTACTAAG
AAAGTGATGGAGACAAAAGCTATGAACATCAGGAATCACTTTGATTTGAACTCATGTATT
ACTGAGGATGAAGAAGAACCAGTTTCTGCTGTAACCGATAAGGCCAGTGTGAAGACTATT
CTGGATATAGACCTCGAAGCCCCTGTACTTATGGACAATGAACAAGATGATTTGCCTGGA
GAAGATGATGACAAGCAACACGAGGCATCTTTGCAGCACACACAGGAGGAACTACTCAAG
ACTGCAGCAGAAGCAATAGTTGCCATCTCATCATTCACTCATTGCACCGCAATAGAGGAA
GCAAAAAGTGATCCGTCTGATGATCCCCTGGAATCTCTTCGATGGTTTGTTGACGTGGTC
TCTTCTTGTGCAGCGGAGCTTGATAGTACTCCATCTGCAAAAGAAATTACAGGCAAGAAC
AACAACATGATGGTTGCACTTGCACATAGTTCTTTTAAGGAAATAGATTACTTTGAAGCT
ATGACATTGCAACTAACAGAGACCAAGGAGGAAGATTACATGCCTAAGCCATTTGTTCCT
GAAGTCCAAACAGTAGAAGATGCAGGAGCAGCCAGTTCACTAACAAATCGACCACGAAGA
GGGAATGCAAGGAGGGGAAGACAACGGAGGGACTTCCAAAGGGATGTCCTTCCTGGTCTG
TCTTCATTGTCAAGGCATGAGGTGACTGAAGACATCCAGATATTCGGAGGGTTGATGAGA
GCAACAGGCCATACTTGGAACTCCAGTTTGACAAGAAGGAACGGGACAAGAAATGGAGGT
GCAAGGGGAAGGAGGAAAAAAGTCGTGGACACCAGTACCCCGGTATTGACCACAACAACG
ACAACCTCTCCACTAATTTACCAACTTAACAACATTGAAGCCAGTTTGGAAGATAACAAA
AGCCTAACAGGGTGGGGAAAGACGCCTAGACGCCCTCGGAGACAAAGATGCCCTGCAGGC
AATCCTTCTCCTGTCCTGTTTACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049378
PEP Infomation

pacid=37444122 transcript=PGSC0003DMT400072979 locus=PGSC0003DMG402028385 ID=PGSC0003DMT400072979.v4.03 annot-version=v4.03
Sequence

MGTQVHYKGFSPSYYSMRDLNEDANSSSWPLFYGDKTLPNGQYCNGFTSRTVTDAYPGYD
KDILKQKMIEHEAIFRNQVVELHRLYRIQRDMMDEFKRKEMHKHRSSMEPSCSSSHLGPQ
VPSEDVRKWNITNLPLENSSYTRPSTSGTEIVNSPFSSSKGDCVQPDRVLMQNDYSSKAC
DVLEARPSKVRKKLFDLHLPANDYLDTEEGGQLRDNAGSLHPSYPANVDYVVTQESGTKL
FLGGGAKGDRRKDTSTSNSCLRSSIGLADLNEPAQLDEAIDPVDFLGYGNNHKETRSINA
SAKSNSPFVALPWNSNCASPNESLSNRYDRSRGKDREWLTSAHETGNIKGSSVSLPRGLE
EEKIPAASHQAPVMINKAYQAPGAYLVHHIKDGIWKDRTGHSLDMSHRNGEQSNYTQVGP
FVTSKMASPFPCASSSEFSSSWPHSVSSWEKPNGSFTQRLSSLHTNSFFNSSAAVGKGSQ
SSQRQIGDYWQANGGSSRVRPGCASELPNRSVFYHGSSSGTKESPIHVPSGAFDSLSYIK
GDRFTSEHSSNNAFENFLISSNNTDVKSAKGFNLNVLATSALSEEPPRQDVEFSNEKRER
QDPVTVLPWLKAKANYKNEDVNTRIGGTSADSGFVQAYSNSPFCQSDPSALEHHHMKTAK
EVVETPHVRKILGVPILDIPVASRNESSSSLVFASANLRSSPERKTIKQERSMVIDINVA
CDLSMLEPEEPYVVEQIATKKVMETKAMNIRNHFDLNSCITEDEEEPVSAVTDKASVKTI
LDIDLEAPVLMDNEQDDLPGEDDDKQHEASLQHTQEELLKTAAEAIVAISSFTHCTAIEE
AKSDPSDDPLESLRWFVDVVSSCAAELDSTPSAKEITGKNNNMMVALAHSSFKEIDYFEA
MTLQLTETKEEDYMPKPFVPEVQTVEDAGAASSLTNRPRRGNARRGRQRRDFQRDVLPGL
SSLSRHEVTEDIQIFGGLMRATGHTWNSSLTRRNGTRNGGARGRRKKVVDTSTPVLTTTT
TTSPLIYQLNNIEASLEDNKSLTGWGKTPRRPRRQRCPAGNPSPVLFT*

Transcript Sequence

Transcript ID

PGSC0003DMT400072979
Transcript Infomation

pacid=37444122 locus=PGSC0003DMG402028385 ID=PGSC0003DMT400072979.v4.03 annot-version=v4.03
Sequence

ATGGGAACACAAGTGCACTATAAAGGATTCTCACCAAGCTATTACTCTATGAGAGACCTT
AATGAGGATGCTAACAGCAGCAGTTGGCCCCTATTTTATGGAGATAAGACTTTACCAAAC
GGGCAATATTGTAATGGTTTCACGTCGAGGACTGTAACTGATGCATATCCAGGGTATGAT
AAGGACATTCTAAAGCAGAAAATGATTGAACACGAGGCCATATTCAGGAATCAGGTGGTG
GAACTTCATCGCCTTTACAGAATTCAAAGGGACATGATGGACGAATTTAAAAGGAAGGAA
ATGCATAAACATCGCTCATCAATGGAGCCATCATGTTCATCCAGTCACCTAGGACCTCAA
GTACCATCTGAGGATGTCCGGAAATGGAACATCACAAACCTTCCCTTGGAAAATTCTAGT
TATACTAGACCATCTACATCTGGTACTGAAATTGTTAATTCTCCTTTTAGTTCTTCAAAA
GGAGATTGTGTACAGCCCGATCGAGTTCTAATGCAAAATGATTATTCTTCGAAAGCCTGT
GATGTTTTGGAGGCTAGGCCCTCAAAGGTCCGGAAAAAGTTGTTTGATCTTCACCTTCCA
GCCAATGATTACTTAGATACAGAAGAAGGTGGGCAGTTGCGAGATAATGCAGGATCTTTA
CATCCTAGTTATCCTGCTAATGTAGATTATGTAGTTACTCAAGAGAGTGGAACAAAATTG
TTTCTTGGTGGTGGTGCAAAGGGTGATCGCCGAAAAGATACTTCAACATCCAATTCGTGT
TTGAGAAGCTCAATTGGATTGGCTGACCTAAATGAACCAGCGCAGCTTGATGAAGCAATC
GATCCTGTTGATTTTCTTGGTTATGGTAATAATCATAAAGAGACTAGAAGCATAAATGCT
TCTGCAAAATCAAATTCACCGTTTGTGGCTTTGCCTTGGAATTCCAATTGTGCAAGCCCA
AATGAGTCTTTAAGTAACCGATACGATCGCAGTAGAGGCAAAGACAGGGAGTGGTTAACT
TCAGCACATGAAACAGGTAACATCAAAGGCAGCTCAGTTTCATTACCAAGAGGTCTCGAA
GAAGAAAAGATCCCTGCAGCTTCCCATCAAGCACCAGTAATGATTAACAAAGCCTATCAA
GCTCCGGGCGCTTATCTAGTTCACCATATTAAGGATGGCATTTGGAAAGATAGAACAGGA
CATAGTTTAGATATGTCTCACAGAAATGGTGAGCAGTCTAATTATACTCAAGTGGGACCA
TTTGTTACTTCCAAGATGGCTAGTCCATTTCCATGTGCAAGTTCCTCTGAATTTAGCAGT
TCGTGGCCGCATTCTGTCTCTTCTTGGGAGAAGCCAAACGGTAGCTTTACTCAGAGGTTA
TCCTCATTGCATACAAATTCATTTTTCAACTCATCTGCAGCAGTTGGTAAGGGTTCACAG
TCATCTCAGAGACAAATTGGAGACTATTGGCAAGCTAATGGTGGCAGTTCTAGGGTGCGT
CCAGGCTGTGCCAGTGAGCTACCCAACCGAAGTGTTTTCTACCATGGGTCCTCATCTGGG
ACGAAAGAATCACCAATTCACGTCCCTTCAGGTGCTTTTGACTCTTTGAGCTACATTAAG
GGGGACCGGTTTACATCTGAACATTCCTCTAATAATGCATTCGAGAATTTTCTCATTAGT
TCTAACAATACGGATGTGAAATCTGCAAAAGGCTTCAACTTAAATGTGCTAGCAACAAGT
GCACTCAGCGAGGAACCTCCCAGGCAAGATGTTGAGTTTAGTAATGAAAAAAGAGAGCGT
CAAGATCCTGTGACAGTTTTGCCGTGGCTTAAAGCTAAAGCAAATTATAAAAATGAGGAC
GTCAATACAAGGATAGGTGGAACTTCAGCAGATTCAGGATTTGTCCAGGCTTACTCAAAC
TCTCCTTTCTGCCAGAGTGATCCATCAGCTTTGGAACATCACCATATGAAGACCGCAAAA
GAAGTGGTCGAGACGCCACATGTAAGGAAAATCCTTGGTGTTCCAATCCTCGATATTCCC
GTAGCTTCCAGAAATGAGTCGTCATCATCACTTGTTTTTGCTTCTGCTAATCTTCGTTCC
TCTCCTGAGAGAAAAACTATCAAACAAGAGAGGAGTATGGTGATCGACATTAACGTGGCT
TGTGACCTTTCTATGCTTGAGCCTGAGGAACCTTATGTTGTAGAACAAATTGCTACTAAG
AAAGTGATGGAGACAAAAGCTATGAACATCAGGAATCACTTTGATTTGAACTCATGTATT
ACTGAGGATGAAGAAGAACCAGTTTCTGCTGTAACCGATAAGGCCAGTGTGAAGACTATT
CTGGATATAGACCTCGAAGCCCCTGTACTTATGGACAATGAACAAGATGATTTGCCTGGA
GAAGATGATGACAAGCAACACGAGGCATCTTTGCAGCACACACAGGAGGAACTACTCAAG
ACTGCAGCAGAAGCAATAGTTGCCATCTCATCATTCACTCATTGCACCGCAATAGAGGAA
GCAAAAAGTGATCCGTCTGATGATCCCCTGGAATCTCTTCGATGGTTTGTTGACGTGGTC
TCTTCTTGTGCAGCGGAGCTTGATAGTACTCCATCTGCAAAAGAAATTACAGGCAAGAAC
AACAACATGATGGTTGCACTTGCACATAGTTCTTTTAAGGAAATAGATTACTTTGAAGCT
ATGACATTGCAACTAACAGAGACCAAGGAGGAAGATTACATGCCTAAGCCATTTGTTCCT
GAAGTCCAAACAGTAGAAGATGCAGGAGCAGCCAGTTCACTAACAAATCGACCACGAAGA
GGGAATGCAAGGAGGGGAAGACAACGGAGGGACTTCCAAAGGGATGTCCTTCCTGGTCTG
TCTTCATTGTCAAGGCATGAGGTGACTGAAGACATCCAGATATTCGGAGGGTTGATGAGA
GCAACAGGCCATACTTGGAACTCCAGTTTGACAAGAAGGAACGGGACAAGAAATGGAGGT
GCAAGGGGAAGGAGGAAAAAAGTCGTGGACACCAGTACCCCGGTATTGACCACAACAACG
ACAACCTCTCCACTAATTTACCAACTTAACAACATTGAAGCCAGTTTGGAAGATAACAAA
AGCCTAACAGGGTGGGGAAAGACGCCTAGACGCCCTCGGAGACAAAGATGCCCTGCAGGC
AATCCTTCTCCTGTCCTGTTTACTTAA