Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072977
CDS Infomation

pacid=37444270 polypeptide=PGSC0003DMP400049376 locus=PGSC0003DMG401028385 ID=PGSC0003DMT400072977.v4.03 annot-version=v4.03
Sequence

ATGGGAACACAAGTGCACTACAAAGGATTCCTACCAAGCTATTACTCTATGAAGGACCTT
AATGAGGATTCTAACAGCAGCAGTTGGACCCCATCTTATGGAGATAAGACATTACCAAAC
GGGCAATATTGTAATGGTTTCACCCCGAGGACTACAACTAATGCATATCCAGGGTATGAT
AAGGACATTCTAAAGCAGACAATGCTTGAACACGAGGCCATATTCAGGAATCAGGTGGTG
GAACTTCATCGCCTTTACAGAATTCAAAGGGACATGATGGACGAATTTAAAAGGAAGGAA
ATGCATAAATATCGCTCATCAATGGAGCCATCATGTTCATCCAGTCACCTAGGACCTCAA
GTACCATCTGAGGATGTTCGGAAATGGCACATCGCAAACTTTCCGTTGGAAAATTCTAGT
TATACTAGACCATCTACATCTGGTACTGAAAATGTTAATTCTCCCTTTAGTTCTTCAAAA
GGAGATGGTGTACAGCCTGGTCGAGTTCAAATGCAAAATGGTTATTCTTCGAAAGCCTGT
GATATTTTGGAGGCTAGGCCCTCAAAGGTCCGGAAAATGTTGTTTGATCTTCACCTTCCA
GCCGATGATTACATAGATACAGAAGATGGTGGGCAGTCGCGAGATAATGCAGGATCTTTA
CATCCTAGTTATCCTGTTAATGGAAATTATGTAGTTCCTCAAGAGAATGGAAAAAAATTG
TTTCTTGGTGGCGATGGTGCTGCAAAAGGTGATAGCCGAAAAGATGCTTCAACATCCAAT
TCATGTTTGAGAAGCTCAATTGGGTTGGCTGACCTAAATGAACCAGCGCAGCTTGATGAA
GCAACTGATCCTGTTGATTTTCTTGGTTACGGTAATAATCCTAAAGAGACTAGAAGCATA
AATGCTTCTGCAAAATCAAATCCGCCATTTGTGGCTTTGCCTTGGAATTCCAATTGTGCC
AGCCCAAATGAGTCTGTAAGTAACCTATACAATCGCAGTAGAGGCAAAGAGAGGGAGTGG
TTGGCTTCGGCATATGAAACCGGTAACATCAAAGGCAGCTCAGTTTCATTACCAAGAGGT
CTCGAAGAAGAAAAGATCCCTGCAGCTTCCCATCAAGCACCAGCAATGATTAACAAAGCC
TATCAAACTCCGGGCGCTCATCTAGTTCACCATATTAAGGATGACATTTGGAAAGATAGA
ACAGGACATAGTTTAGATATGTCTCACAGAAATGGTGAGCAGTCTAATTATACTCAAGTG
GGACCATTTGTTACTTCCAAGATGGCTAGTCCATTTCCATGTGCAAGTTCCTCTGAATTT
AGCAGTTCGTGGCCGCATTCTGTCTCTTCTTGGGAGAAGCCAAACGGTAGCTTTACTCAG
AGGTTATCCTCATTGCATACAAATTCATTTTTCAACTCATCTGCAGCAGTTGGTAAGGGT
TCACAGTCATCTCAGAGACAAATTGGAGACTATTGGCAAGCTAATGGTGGCAGTTCTAGG
GTGCGTCCAGGCTGTCCCAGTGGGATACCCAACCGAAATGTTTTCTACCATGGGTCCTCA
TCTGGGACGAAAGAATCACCAATTCACGTCCCTTCAGGTGCTTTTGACTCTTTGAGCTAC
ATTAAGGGGGACCGGTTTACATCTGAACATTCCTCTAATAATGCATGCGAGAATTTTCTC
ATTAGTACGGATGTGAAATCTGCAAAAGGCTTCAACTTAAATGTGCTAGCAACAAGTGCA
CTTAGTGAGGAACCTCCCAGGCAAGATGTTGAGTTTAGTAATGAAAAAAGAGAGCGTCAA
GACCCTGTGACAGTTTTGCCGTGGCTTAAAGCTAAAGCAAATTATAAAAATGAGGACGTC
AATACAAGGATAGGTGGAACTTCAGCAGATTCAGGATTTGTCCAGGCTTACTCAAACTCT
CCTTTCTGCCAGAGTGATCCATCAGCTTTGGAACATCATCATATGAAGACCGCAAAAGAA
GTGTGCGAGATGGGACATGTAAGGAAAATTCTTGGTGTTCCAATCCTCGATATTCCCGTT
GCTTCCAGAAATGAGTCATCATCATCACTTGTTTCTGCTTCTGCTAATCTCCGTTCCTCT
CCTGAGAGAAAGACTATCAGACATGAGAGGAGGAGTATGGTGATCGACATTAACGTGGCT
TGTGACCTTTCTATGGTTGAGCCCGAGGAATCTGATGCTGTAGTACATATCGTTACTACG
AAAGTGATGGAGACAAAAACTATCAACATCAGGAATCACTTTGATTTGAACTCATGTATT
ACTGAGGATGAAGAACCAGTTTCATCTGAAACCAACAAGTCCAATGTGAAGACTATTTTG
GATATAGATCTGGAAGCTCCTGTAGTTATGGACATTGAACAAGATAATTTGCCTAGAGAA
GAAGACGAAAAGCAACGTGGGGCATCTTCGCAGCTGCCTGACCATAAACCTGAGCAAACA
CAGGAGGAATTACTCAGGACTGCAGCAGAAGCAATAGTTGCCATCTCATCATCCACTCAT
TGCATCTCGACTGAGGAAAGACACAGTGATACGTCTGATGATCCTCTGACATCTCTTCGA
TGGTTTGTTGATGTGGTCTCTTCTTGTGCAGCCGAGCTAGATAGTACTCCATCTGCTAAA
GAAATTACATGCAAGAACAACAACATGATGGTTACACATAGTGCTTTTAAGGAAATTGAT
TACTTTGAAGCAATGACATTGCAATTAACAGAGACCAAGGAGGAAGACTACATGCCCAAG
CCATTTATTCCTGAAGTCCAAACAGTGGAAGATGCAGGAGCCAGTTCACTAACAAACCGA
CCCCGAAGAGGGAATGCAAGGAGGGGAAGACAGCGGAGGGACTTCCAAAGGGATATCCTT
CCCGGTCTAGCTTCATTGTCAAGGCATGAGGTGACCGAAGACATTCAGATATTTGGAGGG
TTGATGAGAGCAACAGGCCATACTTGGAACTCCAGTTTGACAAGAAGGAATGGGACAAGA
AATGGAGGTACTAGGGGAAGGCGGAAAAAAGTTGTGGACACCAGTACCCCAGCCCCGGTT
TTGACCACAACAACAACGAGCTCTCCACTAATACACCAACTTAATAACATTGAAGCCAGT
TTGGAAGACAATAAAAGCCTAACAGGGTGGGGAAAGACACCTAGACGCCCTCGGAGACAA
AGATGCCCTGCAGGCACTCCTTCGGCTGTCATGTTAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049376
PEP Infomation

pacid=37444270 transcript=PGSC0003DMT400072977 locus=PGSC0003DMG401028385 ID=PGSC0003DMT400072977.v4.03 annot-version=v4.03
Sequence

MGTQVHYKGFLPSYYSMKDLNEDSNSSSWTPSYGDKTLPNGQYCNGFTPRTTTNAYPGYD
KDILKQTMLEHEAIFRNQVVELHRLYRIQRDMMDEFKRKEMHKYRSSMEPSCSSSHLGPQ
VPSEDVRKWHIANFPLENSSYTRPSTSGTENVNSPFSSSKGDGVQPGRVQMQNGYSSKAC
DILEARPSKVRKMLFDLHLPADDYIDTEDGGQSRDNAGSLHPSYPVNGNYVVPQENGKKL
FLGGDGAAKGDSRKDASTSNSCLRSSIGLADLNEPAQLDEATDPVDFLGYGNNPKETRSI
NASAKSNPPFVALPWNSNCASPNESVSNLYNRSRGKEREWLASAYETGNIKGSSVSLPRG
LEEEKIPAASHQAPAMINKAYQTPGAHLVHHIKDDIWKDRTGHSLDMSHRNGEQSNYTQV
GPFVTSKMASPFPCASSSEFSSSWPHSVSSWEKPNGSFTQRLSSLHTNSFFNSSAAVGKG
SQSSQRQIGDYWQANGGSSRVRPGCPSGIPNRNVFYHGSSSGTKESPIHVPSGAFDSLSY
IKGDRFTSEHSSNNACENFLISTDVKSAKGFNLNVLATSALSEEPPRQDVEFSNEKRERQ
DPVTVLPWLKAKANYKNEDVNTRIGGTSADSGFVQAYSNSPFCQSDPSALEHHHMKTAKE
VCEMGHVRKILGVPILDIPVASRNESSSSLVSASANLRSSPERKTIRHERRSMVIDINVA
CDLSMVEPEESDAVVHIVTTKVMETKTINIRNHFDLNSCITEDEEPVSSETNKSNVKTIL
DIDLEAPVVMDIEQDNLPREEDEKQRGASSQLPDHKPEQTQEELLRTAAEAIVAISSSTH
CISTEERHSDTSDDPLTSLRWFVDVVSSCAAELDSTPSAKEITCKNNNMMVTHSAFKEID
YFEAMTLQLTETKEEDYMPKPFIPEVQTVEDAGASSLTNRPRRGNARRGRQRRDFQRDIL
PGLASLSRHEVTEDIQIFGGLMRATGHTWNSSLTRRNGTRNGGTRGRRKKVVDTSTPAPV
LTTTTTSSPLIHQLNNIEASLEDNKSLTGWGKTPRRPRRQRCPAGTPSAVMLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400072977
Transcript Infomation

pacid=37444270 locus=PGSC0003DMG401028385 ID=PGSC0003DMT400072977.v4.03 annot-version=v4.03
Sequence

ATGGGAACACAAGTGCACTACAAAGGATTCCTACCAAGCTATTACTCTATGAAGGACCTT
AATGAGGATTCTAACAGCAGCAGTTGGACCCCATCTTATGGAGATAAGACATTACCAAAC
GGGCAATATTGTAATGGTTTCACCCCGAGGACTACAACTAATGCATATCCAGGGTATGAT
AAGGACATTCTAAAGCAGACAATGCTTGAACACGAGGCCATATTCAGGAATCAGGTGGTG
GAACTTCATCGCCTTTACAGAATTCAAAGGGACATGATGGACGAATTTAAAAGGAAGGAA
ATGCATAAATATCGCTCATCAATGGAGCCATCATGTTCATCCAGTCACCTAGGACCTCAA
GTACCATCTGAGGATGTTCGGAAATGGCACATCGCAAACTTTCCGTTGGAAAATTCTAGT
TATACTAGACCATCTACATCTGGTACTGAAAATGTTAATTCTCCCTTTAGTTCTTCAAAA
GGAGATGGTGTACAGCCTGGTCGAGTTCAAATGCAAAATGGTTATTCTTCGAAAGCCTGT
GATATTTTGGAGGCTAGGCCCTCAAAGGTCCGGAAAATGTTGTTTGATCTTCACCTTCCA
GCCGATGATTACATAGATACAGAAGATGGTGGGCAGTCGCGAGATAATGCAGGATCTTTA
CATCCTAGTTATCCTGTTAATGGAAATTATGTAGTTCCTCAAGAGAATGGAAAAAAATTG
TTTCTTGGTGGCGATGGTGCTGCAAAAGGTGATAGCCGAAAAGATGCTTCAACATCCAAT
TCATGTTTGAGAAGCTCAATTGGGTTGGCTGACCTAAATGAACCAGCGCAGCTTGATGAA
GCAACTGATCCTGTTGATTTTCTTGGTTACGGTAATAATCCTAAAGAGACTAGAAGCATA
AATGCTTCTGCAAAATCAAATCCGCCATTTGTGGCTTTGCCTTGGAATTCCAATTGTGCC
AGCCCAAATGAGTCTGTAAGTAACCTATACAATCGCAGTAGAGGCAAAGAGAGGGAGTGG
TTGGCTTCGGCATATGAAACCGGTAACATCAAAGGCAGCTCAGTTTCATTACCAAGAGGT
CTCGAAGAAGAAAAGATCCCTGCAGCTTCCCATCAAGCACCAGCAATGATTAACAAAGCC
TATCAAACTCCGGGCGCTCATCTAGTTCACCATATTAAGGATGACATTTGGAAAGATAGA
ACAGGACATAGTTTAGATATGTCTCACAGAAATGGTGAGCAGTCTAATTATACTCAAGTG
GGACCATTTGTTACTTCCAAGATGGCTAGTCCATTTCCATGTGCAAGTTCCTCTGAATTT
AGCAGTTCGTGGCCGCATTCTGTCTCTTCTTGGGAGAAGCCAAACGGTAGCTTTACTCAG
AGGTTATCCTCATTGCATACAAATTCATTTTTCAACTCATCTGCAGCAGTTGGTAAGGGT
TCACAGTCATCTCAGAGACAAATTGGAGACTATTGGCAAGCTAATGGTGGCAGTTCTAGG
GTGCGTCCAGGCTGTCCCAGTGGGATACCCAACCGAAATGTTTTCTACCATGGGTCCTCA
TCTGGGACGAAAGAATCACCAATTCACGTCCCTTCAGGTGCTTTTGACTCTTTGAGCTAC
ATTAAGGGGGACCGGTTTACATCTGAACATTCCTCTAATAATGCATGCGAGAATTTTCTC
ATTAGTACGGATGTGAAATCTGCAAAAGGCTTCAACTTAAATGTGCTAGCAACAAGTGCA
CTTAGTGAGGAACCTCCCAGGCAAGATGTTGAGTTTAGTAATGAAAAAAGAGAGCGTCAA
GACCCTGTGACAGTTTTGCCGTGGCTTAAAGCTAAAGCAAATTATAAAAATGAGGACGTC
AATACAAGGATAGGTGGAACTTCAGCAGATTCAGGATTTGTCCAGGCTTACTCAAACTCT
CCTTTCTGCCAGAGTGATCCATCAGCTTTGGAACATCATCATATGAAGACCGCAAAAGAA
GTGTGCGAGATGGGACATGTAAGGAAAATTCTTGGTGTTCCAATCCTCGATATTCCCGTT
GCTTCCAGAAATGAGTCATCATCATCACTTGTTTCTGCTTCTGCTAATCTCCGTTCCTCT
CCTGAGAGAAAGACTATCAGACATGAGAGGAGGAGTATGGTGATCGACATTAACGTGGCT
TGTGACCTTTCTATGGTTGAGCCCGAGGAATCTGATGCTGTAGTACATATCGTTACTACG
AAAGTGATGGAGACAAAAACTATCAACATCAGGAATCACTTTGATTTGAACTCATGTATT
ACTGAGGATGAAGAACCAGTTTCATCTGAAACCAACAAGTCCAATGTGAAGACTATTTTG
GATATAGATCTGGAAGCTCCTGTAGTTATGGACATTGAACAAGATAATTTGCCTAGAGAA
GAAGACGAAAAGCAACGTGGGGCATCTTCGCAGCTGCCTGACCATAAACCTGAGCAAACA
CAGGAGGAATTACTCAGGACTGCAGCAGAAGCAATAGTTGCCATCTCATCATCCACTCAT
TGCATCTCGACTGAGGAAAGACACAGTGATACGTCTGATGATCCTCTGACATCTCTTCGA
TGGTTTGTTGATGTGGTCTCTTCTTGTGCAGCCGAGCTAGATAGTACTCCATCTGCTAAA
GAAATTACATGCAAGAACAACAACATGATGGTTACACATAGTGCTTTTAAGGAAATTGAT
TACTTTGAAGCAATGACATTGCAATTAACAGAGACCAAGGAGGAAGACTACATGCCCAAG
CCATTTATTCCTGAAGTCCAAACAGTGGAAGATGCAGGAGCCAGTTCACTAACAAACCGA
CCCCGAAGAGGGAATGCAAGGAGGGGAAGACAGCGGAGGGACTTCCAAAGGGATATCCTT
CCCGGTCTAGCTTCATTGTCAAGGCATGAGGTGACCGAAGACATTCAGATATTTGGAGGG
TTGATGAGAGCAACAGGCCATACTTGGAACTCCAGTTTGACAAGAAGGAATGGGACAAGA
AATGGAGGTACTAGGGGAAGGCGGAAAAAAGTTGTGGACACCAGTACCCCAGCCCCGGTT
TTGACCACAACAACAACGAGCTCTCCACTAATACACCAACTTAATAACATTGAAGCCAGT
TTGGAAGACAATAAAAGCCTAACAGGGTGGGGAAAGACACCTAGACGCCCTCGGAGACAA
AGATGCCCTGCAGGCACTCCTTCGGCTGTCATGTTAACTTAA