Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072963
CDS Infomation

pacid=37442911 polypeptide=PGSC0003DMP400049372 locus=PGSC0003DMG400028382 ID=PGSC0003DMT400072963.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTTTGCTGTCTCTGGATTGAACTCAATTTCAAGTATTTCTAGTTTTAATAAC
AATTTCAGAAGCAAAAACTCAAACATTTTGTTGAGTAGAAGGAGGATTTTATTGTTCAGT
TTTAGAAGAAGAAGAAGAAGAAGTTTCTCTGTTAGCAGTGTTGCTAGTGATCAAAAGCAG
AAGACAAAGGATTCTTCCTCTGATGAAGGATTTACATTAGATGTTTTTCAGCCGGACTCC
ACGTCTGTTTTATCAAGTATAAAGTATCACGCTGAGTTCATGCCATCATTTTCTCCTGAG
AAGTTTGAACTTCCCAAGGCATACTATGCAACTGCAGAGAGTGTTCGAGATACGCTCATT
ATAAATTGGAATGCCACATACGAATTCTATGAAAAGATGAATGTAAAGCAGGCATATTAC
TTGTCTATGGAATTTCTTCAGGGAAGAGCTTTACTCAATGCTATTGGTAACTTGGGGCTA
ACCGGACCTTATGCAGATGCTTTAACTAAGCTCGGGTACAGTTTAGAGGATGTAGCCAGG
CAGGAACCGGATGCAGCTTTAGGTAATGGAGGTTTAGGAAGACTTGCTTCTTGCTTTCTG
GACTCAATGGCGACGCTAAACTACCCTGCATGGGGCTATGGACTTAGATACCAATATGGC
CTTTTCAAACAGCTTATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGGCTCGAG
ATGGGAAATCCATGGGAAATTGTCAGGAATGATATTTCGTATCCCGTAAAATTCTATGGG
AAGGTCATTGAAGGAGCTGATGGGAGGAAGGAATGGGCTGGCGGAGAAGATATAACTGCT
GTTGCCTATGATGTCCCAATACCAGGATATAAAACAAAAACAACGATTAACCTTCGATTG
TGGACAACAAAGCTAGCTGCAGAAGCTTTTGATTTACATGCTTTTAACAATGGAGACCAT
GCCAAAGCATATGAGGCCCAGAAAAAGGCTGAAAAGATTTGCTATGTCTTATATCCAGGT
GACGAGTCGCTTGAAGGAAAGACGCTTAGGTTAAAGCAGCAATACACACTATGTTCTGCT
TCTCTTCAGGACATTATTGCACGGTTCGAGAAGAGATCAGGGAATGCAGTGAACTGGGAT
CAGTTCCCCGAAAAGGTTGCAGTACAGATGAATGACACTCATCCAACACTTTGTATACCA
GAACTTTTAAGGATATTGATGGATGTTAAAGGTTTGAGCTGGAAGCAGGCATGGGAAATT
ACTCAAAGAACGGTCGCATACACTAACCACACTGTTCTACCTGAGGCTCTTGAGAAATGG
AGCTTCACACTTCTTGGTGAACTGCTTCCTCGGCACGTGGAGATCATAGCAATGATAGAT
GAGGAGCTCTTGCATACTATACTTGCTGAATATGGTACTGAAGATCTTGACTTGTTGCAA
GAAAAGCTAAACCAAATGAGGATTCTGGATAATGTTGAAATACCAACTTCTGTTTTGGAG
TTGCTTATAAAAGCCGAAGAAAATGCTGCTGATGTCGAAAAAGCAGCAGATGAAGAACAA
GAAGAAGAAGGTAAGGATGACAGTAAAGATGAGGAAACTGAGGCTGTAAAGGCAGAAACT
ACGAACGAAGAGGAGGAAACTGAGGTTAAGAAGGTTGAGGTGGAGGATAGTCAAGCAAAA
ATAAAACGTATATTTGGGCCACATCCAAATAAATCACAGGTGGTTCACATGGCAAATCTA
TGTGTAGTTAGCGGGCATGCAGTTAACGGTGTTGCTGAGATTCATAGTGAAATAGTTAAA
GATGAAGTTTTCAATGAATTTTACAAGTTATGGCCAGAGAAATTCCAAAACAAGACAAAT
GGTGTGACACCAAGAAGATGGCTAAGTTTCTGTAATCCAGAGTTGAGTGAAATTATAACA
AAGTGGACAGGATCTGATGATTGGTTAGTAAACACTGAAAAATTGGCAGAGCTTCGAAAG
TTTGCTGATAACGAAGAACTCCAGTCTGAGTGGAGGAAGGCAAAAGGAAATAACAAAATG
AAGATTGTCTCTCTCATTAAAGAAAAAACAGGATACGTGGTCAGTCCCGATGCAATGTTT
GATGTTCAGATCAAGCGCATCCATGAGTATAAAAGGCAGCTATTAAATATATTTGGAATC
GTTTATCGCTATAAGAAGATGAAAGAAATGAGCCCTGAAGAACGAAAAGAAAAGTTTGTC
CCTCGAGTTTGCATATTTGGGGGAAAAGCATTTGCTACATATGTTCAGGCCAAGAGAATT
GTAAAATTTATCACTGATGTAGGGGCAACAGTCAACCATGATCCCGAGATTGGTGATCTT
TTGAAGGTTGTATTTGTTCCTGATTACAATGTCAGTGTAGCAGAAGTGCTAATTCCTGGT
AGTGAGTTGTCCCAGCATATAAGTACTGCTGGTATGGAGGCTAGTGGAACCAGCAACATG
AAATTTTCAATGAATGGCTGCCTCCTCATCGGGACGTTAGATGGTGCCAATGTTGAAATA
AGAGAGGAAGTTGGAGAGGACAATTTCTTCCTTTTCGGAGCTCAGGCTCATGAAATTGCT
GGCCTACGAAAGGAAAGAGCCGAGGGAAGGTTTGTCCCGGACCCAAGATTTGAAGAAGTA
AAGGTGTTCATTAGGACAGGCGTCTTTGGCACCTACAACTATGAAGAACTCATGGGATCC
TTGGAAGGAAACGAAGGCTATGGTCGTGCTGACTATTTTCTTGTAGGAAAGGATTTCCCC
GATTATATAGAGTGCCAAGATAAAGTTGATGAAGCATATCGAGACCAGAAGAAATGGACC
AAAATGTCGATCTTAAACACAGCTGGATCGTTCAAATTTAGCAGTGATCGAACAATTCAT
CAATATGCAAGAGATATATGGAGAATTGAACCTGTTGAATTACCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049372
PEP Infomation

pacid=37442911 transcript=PGSC0003DMT400072963 locus=PGSC0003DMG400028382 ID=PGSC0003DMT400072963.v4.03 annot-version=v4.03
Sequence

MATFAVSGLNSISSISSFNNNFRSKNSNILLSRRRILLFSFRRRRRRSFSVSSVASDQKQ
KTKDSSSDEGFTLDVFQPDSTSVLSSIKYHAEFMPSFSPEKFELPKAYYATAESVRDTLI
INWNATYEFYEKMNVKQAYYLSMEFLQGRALLNAIGNLGLTGPYADALTKLGYSLEDVAR
QEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYQYGLFKQLITKDGQEEVAENWLE
MGNPWEIVRNDISYPVKFYGKVIEGADGRKEWAGGEDITAVAYDVPIPGYKTKTTINLRL
WTTKLAAEAFDLHAFNNGDHAKAYEAQKKAEKICYVLYPGDESLEGKTLRLKQQYTLCSA
SLQDIIARFEKRSGNAVNWDQFPEKVAVQMNDTHPTLCIPELLRILMDVKGLSWKQAWEI
TQRTVAYTNHTVLPEALEKWSFTLLGELLPRHVEIIAMIDEELLHTILAEYGTEDLDLLQ
EKLNQMRILDNVEIPTSVLELLIKAEENAADVEKAADEEQEEEGKDDSKDEETEAVKAET
TNEEEETEVKKVEVEDSQAKIKRIFGPHPNKSQVVHMANLCVVSGHAVNGVAEIHSEIVK
DEVFNEFYKLWPEKFQNKTNGVTPRRWLSFCNPELSEIITKWTGSDDWLVNTEKLAELRK
FADNEELQSEWRKAKGNNKMKIVSLIKEKTGYVVSPDAMFDVQIKRIHEYKRQLLNIFGI
VYRYKKMKEMSPEERKEKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL
LKVVFVPDYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSMNGCLLIGTLDGANVEI
REEVGEDNFFLFGAQAHEIAGLRKERAEGRFVPDPRFEEVKVFIRTGVFGTYNYEELMGS
LEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDQKKWTKMSILNTAGSFKFSSDRTIH
QYARDIWRIEPVELP*

Transcript Sequence

Transcript ID

PGSC0003DMT400072963
Transcript Infomation

pacid=37442911 locus=PGSC0003DMG400028382 ID=PGSC0003DMT400072963.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTTTGCTGTCTCTGGATTGAACTCAATTTCAAGTATTTCTAGTTTTAATAAC
AATTTCAGAAGCAAAAACTCAAACATTTTGTTGAGTAGAAGGAGGATTTTATTGTTCAGT
TTTAGAAGAAGAAGAAGAAGAAGTTTCTCTGTTAGCAGTGTTGCTAGTGATCAAAAGCAG
AAGACAAAGGATTCTTCCTCTGATGAAGGATTTACATTAGATGTTTTTCAGCCGGACTCC
ACGTCTGTTTTATCAAGTATAAAGTATCACGCTGAGTTCATGCCATCATTTTCTCCTGAG
AAGTTTGAACTTCCCAAGGCATACTATGCAACTGCAGAGAGTGTTCGAGATACGCTCATT
ATAAATTGGAATGCCACATACGAATTCTATGAAAAGATGAATGTAAAGCAGGCATATTAC
TTGTCTATGGAATTTCTTCAGGGAAGAGCTTTACTCAATGCTATTGGTAACTTGGGGCTA
ACCGGACCTTATGCAGATGCTTTAACTAAGCTCGGGTACAGTTTAGAGGATGTAGCCAGG
CAGGAACCGGATGCAGCTTTAGGTAATGGAGGTTTAGGAAGACTTGCTTCTTGCTTTCTG
GACTCAATGGCGACGCTAAACTACCCTGCATGGGGCTATGGACTTAGATACCAATATGGC
CTTTTCAAACAGCTTATTACAAAAGATGGCCAGGAGGAAGTTGCTGAAAATTGGCTCGAG
ATGGGAAATCCATGGGAAATTGTCAGGAATGATATTTCGTATCCCGTAAAATTCTATGGG
AAGGTCATTGAAGGAGCTGATGGGAGGAAGGAATGGGCTGGCGGAGAAGATATAACTGCT
GTTGCCTATGATGTCCCAATACCAGGATATAAAACAAAAACAACGATTAACCTTCGATTG
TGGACAACAAAGCTAGCTGCAGAAGCTTTTGATTTACATGCTTTTAACAATGGAGACCAT
GCCAAAGCATATGAGGCCCAGAAAAAGGCTGAAAAGATTTGCTATGTCTTATATCCAGGT
GACGAGTCGCTTGAAGGAAAGACGCTTAGGTTAAAGCAGCAATACACACTATGTTCTGCT
TCTCTTCAGGACATTATTGCACGGTTCGAGAAGAGATCAGGGAATGCAGTGAACTGGGAT
CAGTTCCCCGAAAAGGTTGCAGTACAGATGAATGACACTCATCCAACACTTTGTATACCA
GAACTTTTAAGGATATTGATGGATGTTAAAGGTTTGAGCTGGAAGCAGGCATGGGAAATT
ACTCAAAGAACGGTCGCATACACTAACCACACTGTTCTACCTGAGGCTCTTGAGAAATGG
AGCTTCACACTTCTTGGTGAACTGCTTCCTCGGCACGTGGAGATCATAGCAATGATAGAT
GAGGAGCTCTTGCATACTATACTTGCTGAATATGGTACTGAAGATCTTGACTTGTTGCAA
GAAAAGCTAAACCAAATGAGGATTCTGGATAATGTTGAAATACCAACTTCTGTTTTGGAG
TTGCTTATAAAAGCCGAAGAAAATGCTGCTGATGTCGAAAAAGCAGCAGATGAAGAACAA
GAAGAAGAAGGTAAGGATGACAGTAAAGATGAGGAAACTGAGGCTGTAAAGGCAGAAACT
ACGAACGAAGAGGAGGAAACTGAGGTTAAGAAGGTTGAGGTGGAGGATAGTCAAGCAAAA
ATAAAACGTATATTTGGGCCACATCCAAATAAATCACAGGTGGTTCACATGGCAAATCTA
TGTGTAGTTAGCGGGCATGCAGTTAACGGTGTTGCTGAGATTCATAGTGAAATAGTTAAA
GATGAAGTTTTCAATGAATTTTACAAGTTATGGCCAGAGAAATTCCAAAACAAGACAAAT
GGTGTGACACCAAGAAGATGGCTAAGTTTCTGTAATCCAGAGTTGAGTGAAATTATAACA
AAGTGGACAGGATCTGATGATTGGTTAGTAAACACTGAAAAATTGGCAGAGCTTCGAAAG
TTTGCTGATAACGAAGAACTCCAGTCTGAGTGGAGGAAGGCAAAAGGAAATAACAAAATG
AAGATTGTCTCTCTCATTAAAGAAAAAACAGGATACGTGGTCAGTCCCGATGCAATGTTT
GATGTTCAGATCAAGCGCATCCATGAGTATAAAAGGCAGCTATTAAATATATTTGGAATC
GTTTATCGCTATAAGAAGATGAAAGAAATGAGCCCTGAAGAACGAAAAGAAAAGTTTGTC
CCTCGAGTTTGCATATTTGGGGGAAAAGCATTTGCTACATATGTTCAGGCCAAGAGAATT
GTAAAATTTATCACTGATGTAGGGGCAACAGTCAACCATGATCCCGAGATTGGTGATCTT
TTGAAGGTTGTATTTGTTCCTGATTACAATGTCAGTGTAGCAGAAGTGCTAATTCCTGGT
AGTGAGTTGTCCCAGCATATAAGTACTGCTGGTATGGAGGCTAGTGGAACCAGCAACATG
AAATTTTCAATGAATGGCTGCCTCCTCATCGGGACGTTAGATGGTGCCAATGTTGAAATA
AGAGAGGAAGTTGGAGAGGACAATTTCTTCCTTTTCGGAGCTCAGGCTCATGAAATTGCT
GGCCTACGAAAGGAAAGAGCCGAGGGAAGGTTTGTCCCGGACCCAAGATTTGAAGAAGTA
AAGGTGTTCATTAGGACAGGCGTCTTTGGCACCTACAACTATGAAGAACTCATGGGATCC
TTGGAAGGAAACGAAGGCTATGGTCGTGCTGACTATTTTCTTGTAGGAAAGGATTTCCCC
GATTATATAGAGTGCCAAGATAAAGTTGATGAAGCATATCGAGACCAGAAGAAATGGACC
AAAATGTCGATCTTAAACACAGCTGGATCGTTCAAATTTAGCAGTGATCGAACAATTCAT
CAATATGCAAGAGATATATGGAGAATTGAACCTGTTGAATTACCTTAA