Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072941
CDS Infomation

pacid=37444578 polypeptide=PGSC0003DMP400049355 locus=PGSC0003DMG400028377 ID=PGSC0003DMT400072941.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCAAAAGGAAAGAGAAACTCATGTTTACATGGCCAAGCTCGCGGAGCAAGCT
GAGCGTTACGATGAGATGGTTGAGAGTATGAAGAATGTTGCAAAACTTGATGTGGAATTG
ACAGTGGAGGAAAGGAACTTGCTTTCTGTTGGCTACAAGAACGTCATTGGAGCTCGAAGA
GCTTCATGGCGTATTATGTCTTCCATTGAACAGAAAGAAGAGTCGAAAGGGAACGAGCAA
AATGTCAAGCTGATAAAAGGCTATCGTCAAAAGGTCGAGGAAGAGCTCTCCAAGATTTGC
TCTGATATTCTTGAAATCATTGATAAACATCTCATTCCATCTGCTGGCACTGGCGAAGCT
ACTGTCTTCTATTACAAAATGAAAGGTGACTATTTTCGTTACCTCGCTGAGTTCAAGACT
GATTTAGAAAGGAAAGAGGCTTCTGAACAATCATTGAAGGGCTATGAGGCTGCTACTGCC
ACTGCAAACACTGATCTCTCTTCAACTCATCCGATTCGGCTTGGTCTTGCTTTGAACTTC
TCTGTTTTCTACTATGAGATCAAGAACTCTCCTGAAAGGGCATGTCACTTGGCTAAACAA
GCTTTTGATGAGGCAATTGCAGAGTTAGACACTTTAAGTGAGGAATCATACAAGGACAGT
ACCTTAATTATGCAGCTCTTGAGAGACAACCTCACTCTATGGACTTCTGATTTGCCTGAA
GATGGAGGTGAAGAGAATGTGAAGACTGATGAACCAAAAGCTGTTGAACCAAAATCTGCT
GATGCAAAATCTGCTGAAGCAAAATCTACTGAGGCAAAATCTGTTGAACCTGAAGAGGCA
TCAAAAGATAAACAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400049355
PEP Infomation

pacid=37444578 transcript=PGSC0003DMT400072941 locus=PGSC0003DMG400028377 ID=PGSC0003DMT400072941.v4.03 annot-version=v4.03
Sequence

MASQKERETHVYMAKLAEQAERYDEMVESMKNVAKLDVELTVEERNLLSVGYKNVIGARR
ASWRIMSSIEQKEESKGNEQNVKLIKGYRQKVEEELSKICSDILEIIDKHLIPSAGTGEA
TVFYYKMKGDYFRYLAEFKTDLERKEASEQSLKGYEAATATANTDLSSTHPIRLGLALNF
SVFYYEIKNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPE
DGGEENVKTDEPKAVEPKSADAKSAEAKSTEAKSVEPEEASKDKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400072941
Transcript Infomation

pacid=37444578 locus=PGSC0003DMG400028377 ID=PGSC0003DMT400072941.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCAAAAGGAAAGAGAAACTCATGTTTACATGGCCAAGCTCGCGGAGCAAGCT
GAGCGTTACGATGAGATGGTTGAGAGTATGAAGAATGTTGCAAAACTTGATGTGGAATTG
ACAGTGGAGGAAAGGAACTTGCTTTCTGTTGGCTACAAGAACGTCATTGGAGCTCGAAGA
GCTTCATGGCGTATTATGTCTTCCATTGAACAGAAAGAAGAGTCGAAAGGGAACGAGCAA
AATGTCAAGCTGATAAAAGGCTATCGTCAAAAGGTCGAGGAAGAGCTCTCCAAGATTTGC
TCTGATATTCTTGAAATCATTGATAAACATCTCATTCCATCTGCTGGCACTGGCGAAGCT
ACTGTCTTCTATTACAAAATGAAAGGTGACTATTTTCGTTACCTCGCTGAGTTCAAGACT
GATTTAGAAAGGAAAGAGGCTTCTGAACAATCATTGAAGGGCTATGAGGCTGCTACTGCC
ACTGCAAACACTGATCTCTCTTCAACTCATCCGATTCGGCTTGGTCTTGCTTTGAACTTC
TCTGTTTTCTACTATGAGATCAAGAACTCTCCTGAAAGGGCATGTCACTTGGCTAAACAA
GCTTTTGATGAGGCAATTGCAGAGTTAGACACTTTAAGTGAGGAATCATACAAGGACAGT
ACCTTAATTATGCAGCTCTTGAGAGACAACCTCACTCTATGGACTTCTGATTTGCCTGAA
GATGGAGGTGAAGAGAATGTGAAGACTGATGAACCAAAAGCTGTTGAACCAAAATCTGCT
GATGCAAAATCTGCTGAAGCAAAATCTACTGAGGCAAAATCTGTTGAACCTGAAGAGGCA
TCAAAAGATAAACAATAG