Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072934
CDS Infomation

pacid=37442878 polypeptide=PGSC0003DMP400049348 locus=PGSC0003DMG400028375 ID=PGSC0003DMT400072934.v4.03 annot-version=v4.03
Sequence

ATGGATGCACAGCAACAGCAGAGACAACAAGGTGTTCCGGCTCGCCCAAGGTCCGGCGAT
GGCGGCGGAGACTTCACTCCGATTCTCACTGTGCTCGTTGCTTTCATCGCCATTTTCGCA
TTGATTGTGGCTCCTTCTATTTCAACATTAAATAATAGTGTATCCATTTTACACCAAGTG
CCGGAAGGTCATGTTGGAGTCTATTGGAGAGGAGGTGCCCTTTTAAATACAATAACTGAT
CCAGGTTTTCATATGAAACTTCCCTTTATAACTCAGTTTGAACCCATTCAAGTTACTCTT
CAAACAGATCTGGTAAGGGATATTCCTTGCGGAACCAAAGGAGGAGTGATGATCAACTTT
GAGAAAGTAGAAGTTGTTAACCGCCTTCGGAAGGATCACGTGTATGATACCCTGCTGAAT
TATGGGGTCAATTATGATAATACATGGATATACGACAAGATCCACCATGAGATCAATCAG
TTCTGCAGTGCTCACAGCCTTCAACAAGTTTATATTGACATGTTTGATCAGATCGATGAA
AAAATGAAAGATGCTCTTCAGGCCGACTGCACACGATATGCTCCAGGTATTGAGATTCTC
AGTGTACGTATTACAAAACCTAGCATCCCGGAGAGCATAAGACGAAATTTTGAGAACATG
GAACAGGAGCGCACCAAGGTCTTGATTGCAGTAGAGAGACAAAGAGTTGCTGAGAAGGAA
GCAGAGACGCAGAAAAAGATAGCAATTAGTGAAGCTGAAAGAAATGCTCATGTTAGTAAG
ATCCAAATGGAACAGAAGTTGATGGAAAAAGATAGTGCTAGGAAACAAGAGGAAATTTCA
AATTCAATGTACCTAGCTCGTGAAAAGAGCCTGGCAGATGCATCTTACTATCGAACAATG
AAAGAAGCAGAAGCAAACAAGCTGAAGCTTACTCCAGAATTTCTAGAACTGCGATTCATT
GAAGCTATAGCCAATAACTCGAAAATTTTCTTTGGGAACAAGGTCCCCAACATGGTTCTT
GACCAAAGGCTACTTGGGAACTTTTTGCAAGAGGCTGTACCGCGAGCGGAGTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049348
PEP Infomation

pacid=37442878 transcript=PGSC0003DMT400072934 locus=PGSC0003DMG400028375 ID=PGSC0003DMT400072934.v4.03 annot-version=v4.03
Sequence

MDAQQQQRQQGVPARPRSGDGGGDFTPILTVLVAFIAIFALIVAPSISTLNNSVSILHQV
PEGHVGVYWRGGALLNTITDPGFHMKLPFITQFEPIQVTLQTDLVRDIPCGTKGGVMINF
EKVEVVNRLRKDHVYDTLLNYGVNYDNTWIYDKIHHEINQFCSAHSLQQVYIDMFDQIDE
KMKDALQADCTRYAPGIEILSVRITKPSIPESIRRNFENMEQERTKVLIAVERQRVAEKE
AETQKKIAISEAERNAHVSKIQMEQKLMEKDSARKQEEISNSMYLAREKSLADASYYRTM
KEAEANKLKLTPEFLELRFIEAIANNSKIFFGNKVPNMVLDQRLLGNFLQEAVPRAES*

Transcript Sequence

Transcript ID

PGSC0003DMT400072934
Transcript Infomation

pacid=37442878 locus=PGSC0003DMG400028375 ID=PGSC0003DMT400072934.v4.03 annot-version=v4.03
Sequence

ATGGATGCACAGCAACAGCAGAGACAACAAGGTGTTCCGGCTCGCCCAAGGTCCGGCGAT
GGCGGCGGAGACTTCACTCCGATTCTCACTGTGCTCGTTGCTTTCATCGCCATTTTCGCA
TTGATTGTGGCTCCTTCTATTTCAACATTAAATAATAGTGTATCCATTTTACACCAAGTG
CCGGAAGGTCATGTTGGAGTCTATTGGAGAGGAGGTGCCCTTTTAAATACAATAACTGAT
CCAGGTTTTCATATGAAACTTCCCTTTATAACTCAGTTTGAACCCATTCAAGTTACTCTT
CAAACAGATCTGGTAAGGGATATTCCTTGCGGAACCAAAGGAGGAGTGATGATCAACTTT
GAGAAAGTAGAAGTTGTTAACCGCCTTCGGAAGGATCACGTGTATGATACCCTGCTGAAT
TATGGGGTCAATTATGATAATACATGGATATACGACAAGATCCACCATGAGATCAATCAG
TTCTGCAGTGCTCACAGCCTTCAACAAGTTTATATTGACATGTTTGATCAGATCGATGAA
AAAATGAAAGATGCTCTTCAGGCCGACTGCACACGATATGCTCCAGGTATTGAGATTCTC
AGTGTACGTATTACAAAACCTAGCATCCCGGAGAGCATAAGACGAAATTTTGAGAACATG
GAACAGGAGCGCACCAAGGTCTTGATTGCAGTAGAGAGACAAAGAGTTGCTGAGAAGGAA
GCAGAGACGCAGAAAAAGATAGCAATTAGTGAAGCTGAAAGAAATGCTCATGTTAGTAAG
ATCCAAATGGAACAGAAGTTGATGGAAAAAGATAGTGCTAGGAAACAAGAGGAAATTTCA
AATTCAATGTACCTAGCTCGTGAAAAGAGCCTGGCAGATGCATCTTACTATCGAACAATG
AAAGAAGCAGAAGCAAACAAGCTGAAGCTTACTCCAGAATTTCTAGAACTGCGATTCATT
GAAGCTATAGCCAATAACTCGAAAATTTTCTTTGGGAACAAGGTCCCCAACATGGTTCTT
GACCAAAGGCTACTTGGGAACTTTTTGCAAGAGGCTGTACCGCGAGCGGAGTCTTAG