Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072925
CDS Infomation

pacid=37444687 polypeptide=PGSC0003DMP400049340 locus=PGSC0003DMG400028371 ID=PGSC0003DMT400072925.v4.03 annot-version=v4.03
Sequence

ATGAAAACATTCGTTATGTTGTTGCCCATTTTATGGGTTCTAGTTGCTCTTCAAGGGGTA
ACATCTCATGAAGATCATCCTCTAGCAAGGATTGCTGTTCATAATGCTGTTGCTGCTTTG
GATGCTCGTGCTTATATCAAAGCATCTCCTTCTGTTCTTGGGTCAAACGGCCTAAACCAA
GAATGGATAACTCTGGAGTATGGCACAGGCAACCCGTCAAATGATGATTGGGTTGGAGTG
TTTTCTCCTGCCAATTTCAGTGCAGCTACGTGTGACCCTGAAAATAACATGGTGACTCCA
CCACTTTTGTGTACAGCTCCTATAAAGTATCAATTTGCAAATCGCTCCAATCCCAACTAT
AAAAGAACAGGAAAAGGATCGTTAAAGCTTCAATTGATCAACCAGAGATCAGATTTCTCC
TTCGCTTTGTTTTCTGGTGGATTACGAAATCCAAAGCTGGTAGCAGTGTCAAATACTGTT
GCCTTTGCACATCCAAATGCACCATTATACCCGCGGTTAGCACAGGGAAAGACATGGAAT
GAAATGACTGTTACATGGACAAGTGGATACGATATCAATGAAGCAGAGCCCTTTGTGGAG
TGGGGTCCACAAGGTGGACAACAGATTCGTTCACCAGCAGGGACTTTGACTTTTGATCGT
AGTAGCTTGTGTGGTGCACCAGCAAGAACTGTTGGATGGCGCGATCCAGGATTCATTCAC
ACTAGTTTTCTGAAGGAGTTGTGGCCCAATTTAGCATATACCTACAAGCTGGGGCATAAA
CTGTTTAATGGCACGTATATCTGGAGTCAGATGTACAAATTTAAAGCATCGCCCTATCCT
GGCCAAAGCTCTCTTCAGCGAGTAGTCATTTTTGGTGACATGGGAAAGGAAGAAGCCGAT
GGCTCAAATGTGTACAATCAATACCAACCTGGCTCCCTTAACACTACCAAGCAAATCATT
GAGGACTTAAAGAACATTGACATAGTTTTTCACATTGGTGATATCGTTTACGCCAATGGA
TATCTTTCTCAGTGGGATCAATTTACTTCTCAAGTAGAGCCGATTACTTCAAGAGTACCA
TACATGATTGCTAGTGGCAACCATGAACGCGATTGGCCTGATAGTGGGTCATTTTATGGT
AAAAGGGATTCAGGTGGAGAATGTGGTGTCTTGGCTCAGACAATGTTCTATTTTCCTGCC
GAAAATAGGGATAAGTTCTGGTACTCTACTGATTATGGTATGTTCAGATTCTGTATTGCT
GATACTGAACATGATTGGAGAGAGGGCACCGAACAATATAAGTTCCTTGAACACTGCTTC
GCATCTGTAGATAGACAGAAACAGCCATGGCTAATCTTCCTTGCACATAGGGTACTTGGT
TACTCTTCTGGTGATTTTTACGCAGATGAAGGATCATTTGGAGAACCGATGGGGAGGGAA
AGCCTTCAAAAACTTTGGCAGAAGTATAAAGTTGATATCGCCATATATGGTCATGTCCAT
AATTACGAAAGAACATGTCCCATTTACCAGAATATTTGTACAATGACCGAGAAGAACTCG
TACAAGGGAACCTTGAACGGGACAATACATGTCGTTGCAGGAGGAGGTGGAGCTGGTCTA
GTTAAGTTTACATCCCTCCAGACTAAGTGGAGTATATTCAAAGATTACGATTATGGATTT
GTGAAGATGACAGCATTTGATCATTCAAACCTGTTGTTCGAGTACAAGAAGAGCAGTGAT
GGCAAAGTGTACGACTCTTTCAATATTTCCCGGGATTACAGAGACATCTTGGCATGCACT
GTGGATAGCTGCCCAAGCATGACATTGGCATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049340
PEP Infomation

pacid=37444687 transcript=PGSC0003DMT400072925 locus=PGSC0003DMG400028371 ID=PGSC0003DMT400072925.v4.03 annot-version=v4.03
Sequence

MKTFVMLLPILWVLVALQGVTSHEDHPLARIAVHNAVAALDARAYIKASPSVLGSNGLNQ
EWITLEYGTGNPSNDDWVGVFSPANFSAATCDPENNMVTPPLLCTAPIKYQFANRSNPNY
KRTGKGSLKLQLINQRSDFSFALFSGGLRNPKLVAVSNTVAFAHPNAPLYPRLAQGKTWN
EMTVTWTSGYDINEAEPFVEWGPQGGQQIRSPAGTLTFDRSSLCGAPARTVGWRDPGFIH
TSFLKELWPNLAYTYKLGHKLFNGTYIWSQMYKFKASPYPGQSSLQRVVIFGDMGKEEAD
GSNVYNQYQPGSLNTTKQIIEDLKNIDIVFHIGDIVYANGYLSQWDQFTSQVEPITSRVP
YMIASGNHERDWPDSGSFYGKRDSGGECGVLAQTMFYFPAENRDKFWYSTDYGMFRFCIA
DTEHDWREGTEQYKFLEHCFASVDRQKQPWLIFLAHRVLGYSSGDFYADEGSFGEPMGRE
SLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTMTEKNSYKGTLNGTIHVVAGGGGAGL
VKFTSLQTKWSIFKDYDYGFVKMTAFDHSNLLFEYKKSSDGKVYDSFNISRDYRDILACT
VDSCPSMTLAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072925
Transcript Infomation

pacid=37444687 locus=PGSC0003DMG400028371 ID=PGSC0003DMT400072925.v4.03 annot-version=v4.03
Sequence

ATGAAAACATTCGTTATGTTGTTGCCCATTTTATGGGTTCTAGTTGCTCTTCAAGGGGTA
ACATCTCATGAAGATCATCCTCTAGCAAGGATTGCTGTTCATAATGCTGTTGCTGCTTTG
GATGCTCGTGCTTATATCAAAGCATCTCCTTCTGTTCTTGGGTCAAACGGCCTAAACCAA
GAATGGATAACTCTGGAGTATGGCACAGGCAACCCGTCAAATGATGATTGGGTTGGAGTG
TTTTCTCCTGCCAATTTCAGTGCAGCTACGTGTGACCCTGAAAATAACATGGTGACTCCA
CCACTTTTGTGTACAGCTCCTATAAAGTATCAATTTGCAAATCGCTCCAATCCCAACTAT
AAAAGAACAGGAAAAGGATCGTTAAAGCTTCAATTGATCAACCAGAGATCAGATTTCTCC
TTCGCTTTGTTTTCTGGTGGATTACGAAATCCAAAGCTGGTAGCAGTGTCAAATACTGTT
GCCTTTGCACATCCAAATGCACCATTATACCCGCGGTTAGCACAGGGAAAGACATGGAAT
GAAATGACTGTTACATGGACAAGTGGATACGATATCAATGAAGCAGAGCCCTTTGTGGAG
TGGGGTCCACAAGGTGGACAACAGATTCGTTCACCAGCAGGGACTTTGACTTTTGATCGT
AGTAGCTTGTGTGGTGCACCAGCAAGAACTGTTGGATGGCGCGATCCAGGATTCATTCAC
ACTAGTTTTCTGAAGGAGTTGTGGCCCAATTTAGCATATACCTACAAGCTGGGGCATAAA
CTGTTTAATGGCACGTATATCTGGAGTCAGATGTACAAATTTAAAGCATCGCCCTATCCT
GGCCAAAGCTCTCTTCAGCGAGTAGTCATTTTTGGTGACATGGGAAAGGAAGAAGCCGAT
GGCTCAAATGTGTACAATCAATACCAACCTGGCTCCCTTAACACTACCAAGCAAATCATT
GAGGACTTAAAGAACATTGACATAGTTTTTCACATTGGTGATATCGTTTACGCCAATGGA
TATCTTTCTCAGTGGGATCAATTTACTTCTCAAGTAGAGCCGATTACTTCAAGAGTACCA
TACATGATTGCTAGTGGCAACCATGAACGCGATTGGCCTGATAGTGGGTCATTTTATGGT
AAAAGGGATTCAGGTGGAGAATGTGGTGTCTTGGCTCAGACAATGTTCTATTTTCCTGCC
GAAAATAGGGATAAGTTCTGGTACTCTACTGATTATGGTATGTTCAGATTCTGTATTGCT
GATACTGAACATGATTGGAGAGAGGGCACCGAACAATATAAGTTCCTTGAACACTGCTTC
GCATCTGTAGATAGACAGAAACAGCCATGGCTAATCTTCCTTGCACATAGGGTACTTGGT
TACTCTTCTGGTGATTTTTACGCAGATGAAGGATCATTTGGAGAACCGATGGGGAGGGAA
AGCCTTCAAAAACTTTGGCAGAAGTATAAAGTTGATATCGCCATATATGGTCATGTCCAT
AATTACGAAAGAACATGTCCCATTTACCAGAATATTTGTACAATGACCGAGAAGAACTCG
TACAAGGGAACCTTGAACGGGACAATACATGTCGTTGCAGGAGGAGGTGGAGCTGGTCTA
GTTAAGTTTACATCCCTCCAGACTAAGTGGAGTATATTCAAAGATTACGATTATGGATTT
GTGAAGATGACAGCATTTGATCATTCAAACCTGTTGTTCGAGTACAAGAAGAGCAGTGAT
GGCAAAGTGTACGACTCTTTCAATATTTCCCGGGATTACAGAGACATCTTGGCATGCACT
GTGGATAGCTGCCCAAGCATGACATTGGCATCTTGA