Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072920
CDS Infomation

pacid=37442763 polypeptide=PGSC0003DMP400049335 locus=PGSC0003DMG400028368 ID=PGSC0003DMT400072920.v4.03 annot-version=v4.03
Sequence

ATGTCTGCAGTAAGAAAGTGCTCTGATTCAAATCTAGAGGATTCCTCTTACAGCATTAAT
ATGGAAGATTGGAAGCATGCCAGATCAGTGGTTGGTCCTAGTATAACAAGGGGTGTTACT
GTTGAAATCCCAAAGGTTTCATGGGAAGATATTGGAGGGTTGAAAGACATTAAGAAAAAG
CTTCAGCAAGCTGTTGAATGGCCTTTAAAACACTCAGAAGCATTTGAACGGCTGGGAGTA
TCACCTTCCCGTGGAATCCTTCTTCATGGTCCACCAGGGTGCTCCAAAACAACCCTTGCT
AAAGCTGCTGCTCATGCTGCCCAAGCTTCATTCTTCTCCTTGAGTGGTGCAGAGCTGTAC
TCTATGTATGTTGGTGAGGGTGAAGCTTTATTGCGCAATGCTTTCCGAAGAGCTCGCCTT
GCAGCACCAAGTATAATATTCTTTGATGAGGCTGATGTAGTTGCAACCAAACGAGGAGGA
AGCTCAAGTGGAAGCAGTACAGTTGGAGAGAGATTGTTATCCACCCTCCTAACCGAAATG
GATGGCTTAGAGCAGGCTAAAGGAATTCTTGTTTTGGCTGCCACAAATCGCCCCCACGCA
ATTGATGCTGCACTGATGCGACCAGGAAGATTTGATCTCGTTCTTTATGTTCCCCCTCCT
GACTTGGAAGCTCGATTCGAGGTTCTTAGTGTTCATACACGAGATATGAAATTGAATAAC
AATGTTAATCTGAGACAAATTGCAGAAGACACAGAACTCTTTACTGGAGCCGAGCTTGAA
GGACTATGCAGAGAAGCTGGAATAGTTGCTTTGAGAGAGAACATATCTGCAACAGTTGTA
TCTGATCGACACTTCCAAACAGTCAAAAAGTCACTCAAGCCAGCACTTACCAAAGAAGAG
GTTGCTTCCTATTCTTCCTTCATGAACAATCGATCCGAGAGGTCTGCTCACTCATTTGAA
TCCATCTCCAGTAAACGCGACAACAAGCAAACCAAAAACTTGTTAGTTTTCGCTGGTCCT
GTTACTATCACTGTCATTAGTATTGCAATGTACATTGGTGTGAGATACTTTCTGATGTCT
ACTGAAACATCGACGAGGGAACTAACAAGTACGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049335
PEP Infomation

pacid=37442763 transcript=PGSC0003DMT400072920 locus=PGSC0003DMG400028368 ID=PGSC0003DMT400072920.v4.03 annot-version=v4.03
Sequence

MSAVRKCSDSNLEDSSYSINMEDWKHARSVVGPSITRGVTVEIPKVSWEDIGGLKDIKKK
LQQAVEWPLKHSEAFERLGVSPSRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELY
SMYVGEGEALLRNAFRRARLAAPSIIFFDEADVVATKRGGSSSGSSTVGERLLSTLLTEM
DGLEQAKGILVLAATNRPHAIDAALMRPGRFDLVLYVPPPDLEARFEVLSVHTRDMKLNN
NVNLRQIAEDTELFTGAELEGLCREAGIVALRENISATVVSDRHFQTVKKSLKPALTKEE
VASYSSFMNNRSERSAHSFESISSKRDNKQTKNLLVFAGPVTITVISIAMYIGVRYFLMS
TETSTRELTST*

Transcript Sequence

Transcript ID

PGSC0003DMT400072920
Transcript Infomation

pacid=37442763 locus=PGSC0003DMG400028368 ID=PGSC0003DMT400072920.v4.03 annot-version=v4.03
Sequence

ATGTCTGCAGTAAGAAAGTGCTCTGATTCAAATCTAGAGGATTCCTCTTACAGCATTAAT
ATGGAAGATTGGAAGCATGCCAGATCAGTGGTTGGTCCTAGTATAACAAGGGGTGTTACT
GTTGAAATCCCAAAGGTTTCATGGGAAGATATTGGAGGGTTGAAAGACATTAAGAAAAAG
CTTCAGCAAGCTGTTGAATGGCCTTTAAAACACTCAGAAGCATTTGAACGGCTGGGAGTA
TCACCTTCCCGTGGAATCCTTCTTCATGGTCCACCAGGGTGCTCCAAAACAACCCTTGCT
AAAGCTGCTGCTCATGCTGCCCAAGCTTCATTCTTCTCCTTGAGTGGTGCAGAGCTGTAC
TCTATGTATGTTGGTGAGGGTGAAGCTTTATTGCGCAATGCTTTCCGAAGAGCTCGCCTT
GCAGCACCAAGTATAATATTCTTTGATGAGGCTGATGTAGTTGCAACCAAACGAGGAGGA
AGCTCAAGTGGAAGCAGTACAGTTGGAGAGAGATTGTTATCCACCCTCCTAACCGAAATG
GATGGCTTAGAGCAGGCTAAAGGAATTCTTGTTTTGGCTGCCACAAATCGCCCCCACGCA
ATTGATGCTGCACTGATGCGACCAGGAAGATTTGATCTCGTTCTTTATGTTCCCCCTCCT
GACTTGGAAGCTCGATTCGAGGTTCTTAGTGTTCATACACGAGATATGAAATTGAATAAC
AATGTTAATCTGAGACAAATTGCAGAAGACACAGAACTCTTTACTGGAGCCGAGCTTGAA
GGACTATGCAGAGAAGCTGGAATAGTTGCTTTGAGAGAGAACATATCTGCAACAGTTGTA
TCTGATCGACACTTCCAAACAGTCAAAAAGTCACTCAAGCCAGCACTTACCAAAGAAGAG
GTTGCTTCCTATTCTTCCTTCATGAACAATCGATCCGAGAGGTCTGCTCACTCATTTGAA
TCCATCTCCAGTAAACGCGACAACAAGCAAACCAAAAACTTGTTAGTTTTCGCTGGTCCT
GTTACTATCACTGTCATTAGTATTGCAATGTACATTGGTGTGAGATACTTTCTGATGTCT
ACTGAAACATCGACGAGGGAACTAACAAGTACGTAG