Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072896
CDS Infomation

pacid=37444240 polypeptide=PGSC0003DMP400049316 locus=PGSC0003DMG400028361 ID=PGSC0003DMT400072896.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCAACACCCCTGTTGAAAGATGAGCTTGATATTGTGATTCCCACAATAAGA
AATCTTGATTTTTTGGAGATGTGGAGACCCTTTTTTCAGCCATACCATCTGATTATTGTT
CAAGATGGTGATCCTTCAAAGATCATTAAGGTCCCTGAAGGATTTGATTATGAGCTTTAT
AATCGAAATGACATTAACAGGATTTTGGGTCCTAAAGCTTCTTGTATCTCTTTTAAGGAT
TCTGCTTGTAGGTGTTTTGGATATATGGTGTCTAAGAAGAAGTATATCTACACCATTGAT
GATGATTGCTTTGTGGCCAAGGACCCGTCTGGTAAGGATATCAATGCACTTGAGCAGCAC
ATCAAGAACCTCCTGTGCCCATCCACACCGCACTTCTTCAACACTCTGTATGATCCATAC
AGAGATGGTGCAGATTTCGTCCGTGGCTACCCTTTCAGCATGCGTGAGGGTGCTCCAACA
GCTGTTTCTCATGGACTGTGGCTCAACATCCCTGACTACGATGCTCCCACACAGCTTGTT
AAGCCTCATGAGAGGAACACTAGATACGTTGATGCTGTCATGACGATTCCCAAAGGCACT
TTGTTCCCCATGTGTGGAATGAACTTGGCATTTGACCGTGATCTCATTGGACCTGCAATG
TACTTTGGTCTCATGGGTGACGGTCAGCCAATTGGTCGTTACGACGATATGTGGGCCGGC
TGGTGTACCAAGGTCATATGTGACCATTTGGGACTAGGAATCAAGACTGGTCTGCCCTAC
ATTTGGCACAGCAAAGCTAGCAACCCATTCGTTAACCTCAAAAAGGAGTACAACGGTATC
TTCTGGCAAGAGGAGATCATCCCCTTCTTCCAGGCTGCAACTCTTCCTAAAGAGTGCACA
ACCGTCCAGCAATGCTACCTCGAGCTCTCAAAGCAGGTCAAGAAAAAACTTTCCAGTATC
GATCCCTATTTCACCAAGCTAGGAGAAGCCATGGTCACATGGATCGAAGCTTGGGATGAG
CTCAACCCTACTGGGGACAACTTGGCTAAGCTGTCTATCGCCGATGGTCCAGCAAAGACT
AAAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049316
PEP Infomation

pacid=37444240 transcript=PGSC0003DMT400072896 locus=PGSC0003DMG400028361 ID=PGSC0003DMT400072896.v4.03 annot-version=v4.03
Sequence

MAAATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELY
NRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQH
IKNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLV
KPHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAG
WCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECT
TVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELNPTGDNLAKLSIADGPAKT
KK*

Transcript Sequence

Transcript ID

PGSC0003DMT400072896
Transcript Infomation

pacid=37444240 locus=PGSC0003DMG400028361 ID=PGSC0003DMT400072896.v4.03 annot-version=v4.03
Sequence

ATGGCAGCAGCAACACCCCTGTTGAAAGATGAGCTTGATATTGTGATTCCCACAATAAGA
AATCTTGATTTTTTGGAGATGTGGAGACCCTTTTTTCAGCCATACCATCTGATTATTGTT
CAAGATGGTGATCCTTCAAAGATCATTAAGGTCCCTGAAGGATTTGATTATGAGCTTTAT
AATCGAAATGACATTAACAGGATTTTGGGTCCTAAAGCTTCTTGTATCTCTTTTAAGGAT
TCTGCTTGTAGGTGTTTTGGATATATGGTGTCTAAGAAGAAGTATATCTACACCATTGAT
GATGATTGCTTTGTGGCCAAGGACCCGTCTGGTAAGGATATCAATGCACTTGAGCAGCAC
ATCAAGAACCTCCTGTGCCCATCCACACCGCACTTCTTCAACACTCTGTATGATCCATAC
AGAGATGGTGCAGATTTCGTCCGTGGCTACCCTTTCAGCATGCGTGAGGGTGCTCCAACA
GCTGTTTCTCATGGACTGTGGCTCAACATCCCTGACTACGATGCTCCCACACAGCTTGTT
AAGCCTCATGAGAGGAACACTAGATACGTTGATGCTGTCATGACGATTCCCAAAGGCACT
TTGTTCCCCATGTGTGGAATGAACTTGGCATTTGACCGTGATCTCATTGGACCTGCAATG
TACTTTGGTCTCATGGGTGACGGTCAGCCAATTGGTCGTTACGACGATATGTGGGCCGGC
TGGTGTACCAAGGTCATATGTGACCATTTGGGACTAGGAATCAAGACTGGTCTGCCCTAC
ATTTGGCACAGCAAAGCTAGCAACCCATTCGTTAACCTCAAAAAGGAGTACAACGGTATC
TTCTGGCAAGAGGAGATCATCCCCTTCTTCCAGGCTGCAACTCTTCCTAAAGAGTGCACA
ACCGTCCAGCAATGCTACCTCGAGCTCTCAAAGCAGGTCAAGAAAAAACTTTCCAGTATC
GATCCCTATTTCACCAAGCTAGGAGAAGCCATGGTCACATGGATCGAAGCTTGGGATGAG
CTCAACCCTACTGGGGACAACTTGGCTAAGCTGTCTATCGCCGATGGTCCAGCAAAGACT
AAAAAGTAG