Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072874
CDS Infomation

pacid=37445415 polypeptide=PGSC0003DMP400049299 locus=PGSC0003DMG400028349 ID=PGSC0003DMT400072874.v4.03 annot-version=v4.03
Sequence

ATGTCAAAATCTCAAACTTCTCCCCAAATTCCTCCCAAGTATTTACAAGAGGATGAAATC
AGTGATGAGTGTAAGAAATTGCTCTTAACTCTACCAAAAGAAAGAGGATGGCTTGCATCA
CATATCTATAATTACCAAGGTTTTTGGGTAGCACCAAGATTCATTCAAGGTGTGATTGCT
TGTCAACAACAATTTCAGGCTCAAGATAGTGATATTATCCTTGTTACAACTCCTAAATCA
GGAACCACTTGGTTAAAATCTCTTTTATTTGTTTTAGTGAATCGAATGAAATATCCTGTT
TTTGAACAAAATCACCCTTTACTTGTTAAGAACCCTCATGATCTTATTCCATTCTTGGAA
ATTAAACTCTATGTTGATGGTCTTGTCCCTAATTTTGCATCCTTCACTTCACCTAGACTC
TTGTCAACTCATATGCCCTTTGCTTCATTGCCAAAATCTGTCCAAGATTCAAAAACCAAA
CTTGTTTACTTGTGTAGGAATCCTAAGGACACTTTTATTTCTCTGTGGCATTTTACAAAC
AATTTAAGACTTCATCACAAAGATATACATCCCATTGAAGAAAAATTTGAATCTTTTTGT
AAGGGGGTGAGCCTTTATGGTCCGTTTTGGAATCACGTATTGGATTATTGGAAACAAAGT
ATAGAAAAGCCTAACAAAGTACTTTTCTTGATGTATGAAGAAATTAAAGTGCAGCCCAAA
CTTCAGCTTAAACGCTTGGCTGAATTTTTGGAATGTCCATTTTCCATAGAGGAAGAAAAT
TGTGGAGTGATGGATGAAATATTAAGAATGTGTAGCTTTGAGAATTTGAGCAACCTGGAG
GTGAATGCAGATGGGAAATTGTCAACTGGAGAAGAAAATAATGCGTTCTTTCGTAAAGGA
GAAGTTGGAGATTGGAAGAATTATTTTACCATAGAAATGAGTGAGAAACTCAATCATATT
ATTGAACAAAAATTCCAAGGATCTGGAATAAAGTTTTCATACATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049299
PEP Infomation

pacid=37445415 transcript=PGSC0003DMT400072874 locus=PGSC0003DMG400028349 ID=PGSC0003DMT400072874.v4.03 annot-version=v4.03
Sequence

MSKSQTSPQIPPKYLQEDEISDECKKLLLTLPKERGWLASHIYNYQGFWVAPRFIQGVIA
CQQQFQAQDSDIILVTTPKSGTTWLKSLLFVLVNRMKYPVFEQNHPLLVKNPHDLIPFLE
IKLYVDGLVPNFASFTSPRLLSTHMPFASLPKSVQDSKTKLVYLCRNPKDTFISLWHFTN
NLRLHHKDIHPIEEKFESFCKGVSLYGPFWNHVLDYWKQSIEKPNKVLFLMYEEIKVQPK
LQLKRLAEFLECPFSIEEENCGVMDEILRMCSFENLSNLEVNADGKLSTGEENNAFFRKG
EVGDWKNYFTIEMSEKLNHIIEQKFQGSGIKFSYI*

Transcript Sequence

Transcript ID

PGSC0003DMT400072874
Transcript Infomation

pacid=37445415 locus=PGSC0003DMG400028349 ID=PGSC0003DMT400072874.v4.03 annot-version=v4.03
Sequence

ATGTCAAAATCTCAAACTTCTCCCCAAATTCCTCCCAAGTATTTACAAGAGGATGAAATC
AGTGATGAGTGTAAGAAATTGCTCTTAACTCTACCAAAAGAAAGAGGATGGCTTGCATCA
CATATCTATAATTACCAAGGTTTTTGGGTAGCACCAAGATTCATTCAAGGTGTGATTGCT
TGTCAACAACAATTTCAGGCTCAAGATAGTGATATTATCCTTGTTACAACTCCTAAATCA
GGAACCACTTGGTTAAAATCTCTTTTATTTGTTTTAGTGAATCGAATGAAATATCCTGTT
TTTGAACAAAATCACCCTTTACTTGTTAAGAACCCTCATGATCTTATTCCATTCTTGGAA
ATTAAACTCTATGTTGATGGTCTTGTCCCTAATTTTGCATCCTTCACTTCACCTAGACTC
TTGTCAACTCATATGCCCTTTGCTTCATTGCCAAAATCTGTCCAAGATTCAAAAACCAAA
CTTGTTTACTTGTGTAGGAATCCTAAGGACACTTTTATTTCTCTGTGGCATTTTACAAAC
AATTTAAGACTTCATCACAAAGATATACATCCCATTGAAGAAAAATTTGAATCTTTTTGT
AAGGGGGTGAGCCTTTATGGTCCGTTTTGGAATCACGTATTGGATTATTGGAAACAAAGT
ATAGAAAAGCCTAACAAAGTACTTTTCTTGATGTATGAAGAAATTAAAGTGCAGCCCAAA
CTTCAGCTTAAACGCTTGGCTGAATTTTTGGAATGTCCATTTTCCATAGAGGAAGAAAAT
TGTGGAGTGATGGATGAAATATTAAGAATGTGTAGCTTTGAGAATTTGAGCAACCTGGAG
GTGAATGCAGATGGGAAATTGTCAACTGGAGAAGAAAATAATGCGTTCTTTCGTAAAGGA
GAAGTTGGAGATTGGAAGAATTATTTTACCATAGAAATGAGTGAGAAACTCAATCATATT
ATTGAACAAAAATTCCAAGGATCTGGAATAAAGTTTTCATACATCTAA