Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072873
CDS Infomation

pacid=37442321 polypeptide=PGSC0003DMP400049298 locus=PGSC0003DMG400028348 ID=PGSC0003DMT400072873.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGTTTTCTCTTTACCCTCTTCATCTTTCCTCTGTCCACTCAAAACCACAAGA
TTCAGAACAAAGTTTCAATCTTTACACAGTTCCCCAAAACCATTCTTGATAAACTCACTT
CAGTTAAAAGAACTTGACCCAAATATCCCAGAACCAGTCCAAACATTCTGGAAGTGGCTA
TGTGATGAAGGGGTTGTATCAGCAAAGACACCTGTAAAGCCAGGAATTGTACCAGAAGGT
TTAGGATTAGTTGCTAAGAGAGATATAGCTAAAGGGGAGACAGTTCTAGAAGTTCCTAGA
AGGTTCTGGATTAATCCAGATGCAGTTGCAGATACTGAAATTGGGAATGTGTGTACTGGA
TTGAAACCTTGGATTTCTGTTGCTCTTTTCTTGCTTAGAGAGAAATGGAGAGATGATTCA
AAGTGGAAATATTACATGGCTGTTCTTCCAGAGTCTACTGATTCCACTATATATTGGTCT
GAAGAGGAGCTTTCTGAGATTCAAGGGACTCAACTTTTAAGCACAACATTGAGTGTGAAA
GATTATGTGCAAAATGAATTTCAAAAAGTGGAAGAAGAAGTCATACTTCCTAACAAGCAG
CTTTTCCCTTTTCCCATAACCTTGGATGATTTCTTCTGGGCATTTGGAATGCTCAGATCA
AGGGCATTTTCTCGTCTTCGGAATCAAAATCTTATTCTGGTTCCTTTTGCTGACCTGACA
AACCACAATGCCAGAGTGACCACAGAAGATCATGCCCATGAAGTTAGGGGACCAGCAGGT
CTGTTCTCGTGGGATTTGTTATTTTCTTTACGAAGTCCATTGAAACTGAAGGCTGGAGAC
CAGCTTTTCATCCAATATGACTTGAACAAAAGCAATGCTGATATGGCTCTTGACTATGGC
TTCATCGAACCAAGTACTTCAGCTCGTGATGCATTTACGCTAACTTTGGAAATATCAGAG
TCTGATGATTTTTATGAGGACAAGCTGGATATAGCAGAGTCAAATGGCCTAGGAGAAACT
GCTTACTTTGACATAAAACTTGGACAATCTCTGCCCCCTTTTCTGATTCCATATCTAAGG
CTGGTTGCCCTTAGTGGAACTGATGCTTTCCTACTAGAATCAATTTTCAGAAATGCTGTT
TGGGGTCATCTTGAGTTACCTGTCAGCAGAGCAAATGAGGAGCTCATATGTAAAGTCGTA
CGAGATGCATGCAAATCTGCACTTTCAGCCTATCACACCACAATTGAAGAGGATGAGAAA
CTGATGGAGAAAGGGAACCTCAGTTCAAGGCTTCAGATAGCAGTAGGGATAAGAGCAGGA
GAGAAGAAGGTTTTACAACAAATTGACGATATCTTTAGAGAAAGAGAATTGGAACTAGAT
GAATTAGAATACTACCAAGAAAGGAGGCTTAAAGATCTTGGTCTTGTTGGAGAGCAAGGG
GATATCATATTTTGGGAGCCAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049298
PEP Infomation

pacid=37442321 transcript=PGSC0003DMT400072873 locus=PGSC0003DMG400028348 ID=PGSC0003DMT400072873.v4.03 annot-version=v4.03
Sequence

MASVFSLPSSSFLCPLKTTRFRTKFQSLHSSPKPFLINSLQLKELDPNIPEPVQTFWKWL
CDEGVVSAKTPVKPGIVPEGLGLVAKRDIAKGETVLEVPRRFWINPDAVADTEIGNVCTG
LKPWISVALFLLREKWRDDSKWKYYMAVLPESTDSTIYWSEEELSEIQGTQLLSTTLSVK
DYVQNEFQKVEEEVILPNKQLFPFPITLDDFFWAFGMLRSRAFSRLRNQNLILVPFADLT
NHNARVTTEDHAHEVRGPAGLFSWDLLFSLRSPLKLKAGDQLFIQYDLNKSNADMALDYG
FIEPSTSARDAFTLTLEISESDDFYEDKLDIAESNGLGETAYFDIKLGQSLPPFLIPYLR
LVALSGTDAFLLESIFRNAVWGHLELPVSRANEELICKVVRDACKSALSAYHTTIEEDEK
LMEKGNLSSRLQIAVGIRAGEKKVLQQIDDIFRERELELDELEYYQERRLKDLGLVGEQG
DIIFWEPK*

Transcript Sequence

Transcript ID

PGSC0003DMT400072873
Transcript Infomation

pacid=37442321 locus=PGSC0003DMG400028348 ID=PGSC0003DMT400072873.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGTTTTCTCTTTACCCTCTTCATCTTTCCTCTGTCCACTCAAAACCACAAGA
TTCAGAACAAAGTTTCAATCTTTACACAGTTCCCCAAAACCATTCTTGATAAACTCACTT
CAGTTAAAAGAACTTGACCCAAATATCCCAGAACCAGTCCAAACATTCTGGAAGTGGCTA
TGTGATGAAGGGGTTGTATCAGCAAAGACACCTGTAAAGCCAGGAATTGTACCAGAAGGT
TTAGGATTAGTTGCTAAGAGAGATATAGCTAAAGGGGAGACAGTTCTAGAAGTTCCTAGA
AGGTTCTGGATTAATCCAGATGCAGTTGCAGATACTGAAATTGGGAATGTGTGTACTGGA
TTGAAACCTTGGATTTCTGTTGCTCTTTTCTTGCTTAGAGAGAAATGGAGAGATGATTCA
AAGTGGAAATATTACATGGCTGTTCTTCCAGAGTCTACTGATTCCACTATATATTGGTCT
GAAGAGGAGCTTTCTGAGATTCAAGGGACTCAACTTTTAAGCACAACATTGAGTGTGAAA
GATTATGTGCAAAATGAATTTCAAAAAGTGGAAGAAGAAGTCATACTTCCTAACAAGCAG
CTTTTCCCTTTTCCCATAACCTTGGATGATTTCTTCTGGGCATTTGGAATGCTCAGATCA
AGGGCATTTTCTCGTCTTCGGAATCAAAATCTTATTCTGGTTCCTTTTGCTGACCTGACA
AACCACAATGCCAGAGTGACCACAGAAGATCATGCCCATGAAGTTAGGGGACCAGCAGGT
CTGTTCTCGTGGGATTTGTTATTTTCTTTACGAAGTCCATTGAAACTGAAGGCTGGAGAC
CAGCTTTTCATCCAATATGACTTGAACAAAAGCAATGCTGATATGGCTCTTGACTATGGC
TTCATCGAACCAAGTACTTCAGCTCGTGATGCATTTACGCTAACTTTGGAAATATCAGAG
TCTGATGATTTTTATGAGGACAAGCTGGATATAGCAGAGTCAAATGGCCTAGGAGAAACT
GCTTACTTTGACATAAAACTTGGACAATCTCTGCCCCCTTTTCTGATTCCATATCTAAGG
CTGGTTGCCCTTAGTGGAACTGATGCTTTCCTACTAGAATCAATTTTCAGAAATGCTGTT
TGGGGTCATCTTGAGTTACCTGTCAGCAGAGCAAATGAGGAGCTCATATGTAAAGTCGTA
CGAGATGCATGCAAATCTGCACTTTCAGCCTATCACACCACAATTGAAGAGGATGAGAAA
CTGATGGAGAAAGGGAACCTCAGTTCAAGGCTTCAGATAGCAGTAGGGATAAGAGCAGGA
GAGAAGAAGGTTTTACAACAAATTGACGATATCTTTAGAGAAAGAGAATTGGAACTAGAT
GAATTAGAATACTACCAAGAAAGGAGGCTTAAAGATCTTGGTCTTGTTGGAGAGCAAGGG
GATATCATATTTTGGGAGCCAAAATAA