Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072846
CDS Infomation

pacid=37442823 polypeptide=PGSC0003DMP400049281 locus=PGSC0003DMG400028339 ID=PGSC0003DMT400072846.v4.03 annot-version=v4.03
Sequence

ATGTCTATGAACATATCACATCCCCTTGACACAGTGAAGTATGTTGAAAAACAATTGCTG
CGTCGAGGCAATGCTCATTTCATCCAAATTCTGCTGAAAATCGAAAAAGATGTAGACGAA
CATCAGTCAAAGTTATATCATTTCCTAGACACTCTGCAGTGGATTGAAGAGAAATGGGGT
TCATTCCGTATGTGCTCGGACAACAACCATCTGAGTCGGATTGAAGACCAATGGTATTCA
TTCAATTACAATATGTTCACAGAGGAACCTTATAATATCCTGACAACTCTCCAGCGTTTT
GTACAGGCAAGCCATTCGTTCAATATGTTTTTAGAGGGATTTCATTTTTCCAAGGAGTCT
CGTCCCCTTGACACACTGCAGAGGATTGAAGAGAAAGACCTTTTGTTTTCAGCCAAGTAC
CTGCCAATAGTATCTCATTTATCTGAAACTCTGCAGCGGATGGAAGATGAATGCAATTCA
TTCTATACATTCTTAGTTGAATATCTGTTTGCACAGGAACTTGATACCCTTAGCGTTCTG
CAACGTATTGAAGAGTATTGGGGACCATTCCGTATGTATTTGGAGGAATTCAGATCAAAA
GTGTCTGATTTCCTTGAAACTTCAGAAGAACATATGTCTTTGTTAGATAGACTGAGGTTC
CTTAAAAGGGATTTCAAGTTCCTGAGTATCATTATCGAATTGCATATCTTCGAAGATGAA
CCACATGTCAGTTGGGGAAGAGTTCGAGCATTGTTCCACGGTGCTGGAGATGAACTCATT
CAGATGTACAGTACGCAAGTAAGTCCGTGGAGTCAACAATTTTATGACTATTTTTGCCAC
TTGCAATATGAGTTTCAGCAGACTAAGTTGGAAATCATAAAGGCTAATTTCCCCGTTCCC
AAAATATCATGTCAAGTTTTAGCCAATGAGGATGGTATTGTGATTCCCGGTTTTGTTATG
AAATTCATTGATATTGTCGCTGATAATATCAGTAATTTACTGAAATTTGATGATCCAAGT
TCACCACTATGTATTGGGGGACGAAGCATGGTTCAAAAAGAAATGGTTTTGAAGGGGTTG
AATTTCCTCTCTAGTTTTGTCTGCTTTGTTTCAGATAGATGCATAGAGACTCGGGTCCAA
CATGCTTTGTTCACTCATGCTGTACAAGTGGCCTGGCAAACAACTATGACTACGTGGTTG
TATCTTCCGAGCAATGAATACATGTATCAAGACACAGCTCCGAACGAAGAGAATCCTTTG
CTTTCTGATCTTCTGCAGAGCAAAATCCAGCCTATTCAGCCAAGCATATGCAGGTTCTAT
ATTCATATCCTGCAAGCTCTAAATTTGGTTCAGTCACAATGGTATCCCGTTATCAATGTT
AAGTATGTATTCGATTGTGAAGTTGGGTTTCTGGAGTCTCTTCGACACACTTTAAAAGAA
CTACCAGTCTCTAGTAATTGCATTGCAATAAAGGCAGAACTTCAGGAGACGCTCAACTTC
TTCGGAGCCATTCTAGTCAATCTACCAACACAGGTCCTTGAATATCATCTTCAAGAAATA
GACTCTGCGATTGTTGATGCAGGACTTCTGGTTTTCTCATTAAATGATGATAATGAGAAT
CTTGATTTCAGGGGAAAAATCCAAAGTATGCAAGGTGTGATCTACCTCGTCGCTAGAAAG
AAATTCCTCCTCCAGTTCAACTTACCTGGAATTGACAGAGTGGGCTCTGCTGATTTCATT
TTAGACAACAAGGAGAAGTTTCTGAGCATGTATTCAAATTCAGTTGATTCAGTTAAGAAC
CAACTTCCGATAATTCAGAAAGAACTCAAGTTCTTTCAAGCTGTCGTAGAACAGCAAGAC
GGACTTCAACATTTTGCAACAAAGACTACTCGTTTGGTGTATGAGGTAGAACATATGGTT
GATGCTTGTAAGAAAAAAGATGTTCCTGACTGGTGTATTTTTATCTGGATCTTGAACATT
GGAGAGGATATTAGAATGCTCATGGCAGAGGTAGCAGAGATTCATAATGAGATACTGTCA
TCTCCAAACAAGCTAACTTCATTTGTGCAGTTGGTTCTCAAGGGATTCGTTCGGATCTTT
GGTGTTGCTTCATTACAATTCGCTAGTACACGAAGGATCAATGAAGAAATCATAGGCTTT
GAGGATGTGAAGGATGAACTGATAGGCAAACTAAAAGGAGGATCATCACGCCTTGATGTA
ATCGCAATAGTTGGAATGGCTGGATTAGGCAAGACAACTCTGGCTAACAAGCTATATTCT
GATAAGTCAGTTGTCTCTTATTTTGACATCCATGCCCATTGCTGTGTCTCTCAAGAATAT
ACGCGGAAGGACTTATTACTAGCCATTCTACATGATATTACTGATGAAAGAGCTAAACTT
AGAAGAGAGACTGAAAATGAATTGGCAGATAAGCTTCGCAAACTTTTAATGCGCAAGAGA
TACCTTCTCCTCATTGATGATGTCTGGGAAACTAGGGCATGGGATGATCTAAAGTTGTGC
TTCCCTGAAGATAACAACAGAAGCAGAATTATTCTGACAACTCGGCATTATGAGGTCGCC
TCTCATGCTAAACATGATAGTGATCCCCATAAGCTTCGATTTCTCAACAGTGATGAAAGT
TGGATGTTGTTAAACAAAAAGGTGTTCAACAATGAAAGTGGTCCTCTTATCCTAAGAGAT
GTCAGCCAAGAAATTGTAAGAAAGTGCGGCGGACTTCCTATTTCAATTATTCTGGTAGCT
GGTATCCTCACAAGAATGAAGAAGGAAAAACATTGTTGGGAACAAATGGCAACAAATTTA
GGTACAAACATTCAGGATCAGATGGAGGGCACTCTTGATCTGAGTTATCAGAATTTACCA
CCCTATTTGAAACCATGCTTTCTGTATTTGGGAGTATTCCCAGAGGATGGAGAGATTCAA
GTCTCAAAGTTAACATGGTTGTGGATAGCGGAAGGCTTCATAAAACCTCATACAGGGAAG
ACTTTGGAGGAAATCGCAGAAAATTACTTGGAGAATCTTGTTGGGAGAAACCTTGTGATG
ATTGATAAAAGGAGTTCTGATGGAAGGATCAAGACATGTCACATTCATGACCTGGTGCAT
GAAGTTTGCAGGAAGAAAGCCAAGTTGGAGAACATTTTACAAAGGATAAATGGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049281
PEP Infomation

pacid=37442823 transcript=PGSC0003DMT400072846 locus=PGSC0003DMG400028339 ID=PGSC0003DMT400072846.v4.03 annot-version=v4.03
Sequence

MSMNISHPLDTVKYVEKQLLRRGNAHFIQILLKIEKDVDEHQSKLYHFLDTLQWIEEKWG
SFRMCSDNNHLSRIEDQWYSFNYNMFTEEPYNILTTLQRFVQASHSFNMFLEGFHFSKES
RPLDTLQRIEEKDLLFSAKYLPIVSHLSETLQRMEDECNSFYTFLVEYLFAQELDTLSVL
QRIEEYWGPFRMYLEEFRSKVSDFLETSEEHMSLLDRLRFLKRDFKFLSIIIELHIFEDE
PHVSWGRVRALFHGAGDELIQMYSTQVSPWSQQFYDYFCHLQYEFQQTKLEIIKANFPVP
KISCQVLANEDGIVIPGFVMKFIDIVADNISNLLKFDDPSSPLCIGGRSMVQKEMVLKGL
NFLSSFVCFVSDRCIETRVQHALFTHAVQVAWQTTMTTWLYLPSNEYMYQDTAPNEENPL
LSDLLQSKIQPIQPSICRFYIHILQALNLVQSQWYPVINVKYVFDCEVGFLESLRHTLKE
LPVSSNCIAIKAELQETLNFFGAILVNLPTQVLEYHLQEIDSAIVDAGLLVFSLNDDNEN
LDFRGKIQSMQGVIYLVARKKFLLQFNLPGIDRVGSADFILDNKEKFLSMYSNSVDSVKN
QLPIIQKELKFFQAVVEQQDGLQHFATKTTRLVYEVEHMVDACKKKDVPDWCIFIWILNI
GEDIRMLMAEVAEIHNEILSSPNKLTSFVQLVLKGFVRIFGVASLQFASTRRINEEIIGF
EDVKDELIGKLKGGSSRLDVIAIVGMAGLGKTTLANKLYSDKSVVSYFDIHAHCCVSQEY
TRKDLLLAILHDITDERAKLRRETENELADKLRKLLMRKRYLLLIDDVWETRAWDDLKLC
FPEDNNRSRIILTTRHYEVASHAKHDSDPHKLRFLNSDESWMLLNKKVFNNESGPLILRD
VSQEIVRKCGGLPISIILVAGILTRMKKEKHCWEQMATNLGTNIQDQMEGTLDLSYQNLP
PYLKPCFLYLGVFPEDGEIQVSKLTWLWIAEGFIKPHTGKTLEEIAENYLENLVGRNLVM
IDKRSSDGRIKTCHIHDLVHEVCRKKAKLENILQRING*

Transcript Sequence

Transcript ID

PGSC0003DMT400072846
Transcript Infomation

pacid=37442823 locus=PGSC0003DMG400028339 ID=PGSC0003DMT400072846.v4.03 annot-version=v4.03
Sequence

ATGTCTATGAACATATCACATCCCCTTGACACAGTGAAGTATGTTGAAAAACAATTGCTG
CGTCGAGGCAATGCTCATTTCATCCAAATTCTGCTGAAAATCGAAAAAGATGTAGACGAA
CATCAGTCAAAGTTATATCATTTCCTAGACACTCTGCAGTGGATTGAAGAGAAATGGGGT
TCATTCCGTATGTGCTCGGACAACAACCATCTGAGTCGGATTGAAGACCAATGGTATTCA
TTCAATTACAATATGTTCACAGAGGAACCTTATAATATCCTGACAACTCTCCAGCGTTTT
GTACAGGCAAGCCATTCGTTCAATATGTTTTTAGAGGGATTTCATTTTTCCAAGGAGTCT
CGTCCCCTTGACACACTGCAGAGGATTGAAGAGAAAGACCTTTTGTTTTCAGCCAAGTAC
CTGCCAATAGTATCTCATTTATCTGAAACTCTGCAGCGGATGGAAGATGAATGCAATTCA
TTCTATACATTCTTAGTTGAATATCTGTTTGCACAGGAACTTGATACCCTTAGCGTTCTG
CAACGTATTGAAGAGTATTGGGGACCATTCCGTATGTATTTGGAGGAATTCAGATCAAAA
GTGTCTGATTTCCTTGAAACTTCAGAAGAACATATGTCTTTGTTAGATAGACTGAGGTTC
CTTAAAAGGGATTTCAAGTTCCTGAGTATCATTATCGAATTGCATATCTTCGAAGATGAA
CCACATGTCAGTTGGGGAAGAGTTCGAGCATTGTTCCACGGTGCTGGAGATGAACTCATT
CAGATGTACAGTACGCAAGTAAGTCCGTGGAGTCAACAATTTTATGACTATTTTTGCCAC
TTGCAATATGAGTTTCAGCAGACTAAGTTGGAAATCATAAAGGCTAATTTCCCCGTTCCC
AAAATATCATGTCAAGTTTTAGCCAATGAGGATGGTATTGTGATTCCCGGTTTTGTTATG
AAATTCATTGATATTGTCGCTGATAATATCAGTAATTTACTGAAATTTGATGATCCAAGT
TCACCACTATGTATTGGGGGACGAAGCATGGTTCAAAAAGAAATGGTTTTGAAGGGGTTG
AATTTCCTCTCTAGTTTTGTCTGCTTTGTTTCAGATAGATGCATAGAGACTCGGGTCCAA
CATGCTTTGTTCACTCATGCTGTACAAGTGGCCTGGCAAACAACTATGACTACGTGGTTG
TATCTTCCGAGCAATGAATACATGTATCAAGACACAGCTCCGAACGAAGAGAATCCTTTG
CTTTCTGATCTTCTGCAGAGCAAAATCCAGCCTATTCAGCCAAGCATATGCAGGTTCTAT
ATTCATATCCTGCAAGCTCTAAATTTGGTTCAGTCACAATGGTATCCCGTTATCAATGTT
AAGTATGTATTCGATTGTGAAGTTGGGTTTCTGGAGTCTCTTCGACACACTTTAAAAGAA
CTACCAGTCTCTAGTAATTGCATTGCAATAAAGGCAGAACTTCAGGAGACGCTCAACTTC
TTCGGAGCCATTCTAGTCAATCTACCAACACAGGTCCTTGAATATCATCTTCAAGAAATA
GACTCTGCGATTGTTGATGCAGGACTTCTGGTTTTCTCATTAAATGATGATAATGAGAAT
CTTGATTTCAGGGGAAAAATCCAAAGTATGCAAGGTGTGATCTACCTCGTCGCTAGAAAG
AAATTCCTCCTCCAGTTCAACTTACCTGGAATTGACAGAGTGGGCTCTGCTGATTTCATT
TTAGACAACAAGGAGAAGTTTCTGAGCATGTATTCAAATTCAGTTGATTCAGTTAAGAAC
CAACTTCCGATAATTCAGAAAGAACTCAAGTTCTTTCAAGCTGTCGTAGAACAGCAAGAC
GGACTTCAACATTTTGCAACAAAGACTACTCGTTTGGTGTATGAGGTAGAACATATGGTT
GATGCTTGTAAGAAAAAAGATGTTCCTGACTGGTGTATTTTTATCTGGATCTTGAACATT
GGAGAGGATATTAGAATGCTCATGGCAGAGGTAGCAGAGATTCATAATGAGATACTGTCA
TCTCCAAACAAGCTAACTTCATTTGTGCAGTTGGTTCTCAAGGGATTCGTTCGGATCTTT
GGTGTTGCTTCATTACAATTCGCTAGTACACGAAGGATCAATGAAGAAATCATAGGCTTT
GAGGATGTGAAGGATGAACTGATAGGCAAACTAAAAGGAGGATCATCACGCCTTGATGTA
ATCGCAATAGTTGGAATGGCTGGATTAGGCAAGACAACTCTGGCTAACAAGCTATATTCT
GATAAGTCAGTTGTCTCTTATTTTGACATCCATGCCCATTGCTGTGTCTCTCAAGAATAT
ACGCGGAAGGACTTATTACTAGCCATTCTACATGATATTACTGATGAAAGAGCTAAACTT
AGAAGAGAGACTGAAAATGAATTGGCAGATAAGCTTCGCAAACTTTTAATGCGCAAGAGA
TACCTTCTCCTCATTGATGATGTCTGGGAAACTAGGGCATGGGATGATCTAAAGTTGTGC
TTCCCTGAAGATAACAACAGAAGCAGAATTATTCTGACAACTCGGCATTATGAGGTCGCC
TCTCATGCTAAACATGATAGTGATCCCCATAAGCTTCGATTTCTCAACAGTGATGAAAGT
TGGATGTTGTTAAACAAAAAGGTGTTCAACAATGAAAGTGGTCCTCTTATCCTAAGAGAT
GTCAGCCAAGAAATTGTAAGAAAGTGCGGCGGACTTCCTATTTCAATTATTCTGGTAGCT
GGTATCCTCACAAGAATGAAGAAGGAAAAACATTGTTGGGAACAAATGGCAACAAATTTA
GGTACAAACATTCAGGATCAGATGGAGGGCACTCTTGATCTGAGTTATCAGAATTTACCA
CCCTATTTGAAACCATGCTTTCTGTATTTGGGAGTATTCCCAGAGGATGGAGAGATTCAA
GTCTCAAAGTTAACATGGTTGTGGATAGCGGAAGGCTTCATAAAACCTCATACAGGGAAG
ACTTTGGAGGAAATCGCAGAAAATTACTTGGAGAATCTTGTTGGGAGAAACCTTGTGATG
ATTGATAAAAGGAGTTCTGATGGAAGGATCAAGACATGTCACATTCATGACCTGGTGCAT
GAAGTTTGCAGGAAGAAAGCCAAGTTGGAGAACATTTTACAAAGGATAAATGGGTAA