Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072836
CDS Infomation

pacid=37443388 polypeptide=PGSC0003DMP400049274 locus=PGSC0003DMG400028335 ID=PGSC0003DMT400072836.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAAATGAAGGATCATCATCTTCTTCAACGTCAAGAGGTCAATTACTCCGTCCA
ACTATTACTTTACCGCCGAGAAGTTCTATTGAGAGTCTATTTTCAGGCGGGTCAAGCGGT
ATTAGCCCGGGTCCGATGACCCTTGTATCCAGTTTCTTCTCCGATAACGATCCAGATTCT
GAGTGTCGTTCATTTTCACAGCTTCTCGCCGGTGCAATGACACCTCCGGCGGGTTTTACC
GGTGGTAGACCGGGTTTCCCGCCACTTCCGCAACCATCTACGGCGGCGATAACTCAGTCA
CCGACTACGTTTACTGTGCCGCCTGGATTGAGTCCAACTAGTTTGTTTGATGGGTTCTTC
TCACCTGGGCAGGGTCCTTTTGGAATGTCACATCAGCAAGTGCTTGCTCAACTTACATCT
CAGGCATCCCAGGTTCAGTCTCAAATGCACATTCAGCCTAACTATCCATCTTCTGCAACG
GCAGCTGCACCATCAATGTCACAGTTCCAGTCCTTACCATCAAATGCAGCAGCAAACCGA
CAGATACCTCCCACTTTGGATCCTAACATCGTGAAAGAGTCATCAGATGTTTCCCTATCT
GATCAGAGGTCAGAACCTGCTTCCTTCGCTGTTGACAAACCTGCTGATGATGGCTACAAC
TGGCGGAAGTATGGGCAGAAGCAGGTCAAGGGAAGTGAATATCCTCGTAGCTATTACAAG
TGTACAAATCCAAATTGTCCAGTCAAGAAGAAGGTTGAGCGCTCCCTAGATGGCCAGGTG
ACTGAGATTATATACAAGGGCCAACACAACCATCAGCCACCTCAAGCTAGTAAGCGTTCA
AAAGAATGTGGAAATCCAAATGGGAACTATAATCTGCAGGGGCCCTATGAGCTCAGCTCA
GAGGGTCTGACAGGAAATTTTAACAAACCCAAGGAGGGCGAACCTTCCTACTCGTTAAGA
ATGAAGGATCAAGAATCCAGCCAAGTAAATGATCAGACCTCTGGCTCAAGTGACAGTGAG
GAAGTGGGTAATGCAGAGACTAGAGTGGACGGAAGGGACATTGATGAACGGGAATCAAAG
CGGAGGGCTGTAGAAGTACAAAGTACAGAGGCAGCTTGTTCTCACCGGACTGTTGCAGAA
CCTAGGATCATTGTTCAAACAACTAGTGAAGTTGATCTATTGGACGATGGTTATAGGTGG
CGAAAGTATGGTCAGAAGGTTGTTAAAGGAAACCCTTATCCAAGAAGCTATTACAAATGT
ACTAGCCAGGGATGTAATGTAAGAAAGCATGTTGAACGGGCTGCAAGTGACCCTAAAGCA
GTCATAACAACATATGAAGGTAAACATAATCATGATGTGCCTGCAGCCAGGAATAGTAGC
CACAATACTGCCAATAATTCTATGTCACAATTGAGGCCACACAACCCTGTAGTTGATAAA
CCAGCTGCAATGCGAAGAGCGGACTTTCAGAGAAATGAACAACAACCTATAGCGCTTCTA
CGCTTCAAAGAAGAACAAAGTACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400049274
PEP Infomation

pacid=37443388 transcript=PGSC0003DMT400072836 locus=PGSC0003DMG400028335 ID=PGSC0003DMT400072836.v4.03 annot-version=v4.03
Sequence

MAENEGSSSSSTSRGQLLRPTITLPPRSSIESLFSGGSSGISPGPMTLVSSFFSDNDPDS
ECRSFSQLLAGAMTPPAGFTGGRPGFPPLPQPSTAAITQSPTTFTVPPGLSPTSLFDGFF
SPGQGPFGMSHQQVLAQLTSQASQVQSQMHIQPNYPSSATAAAPSMSQFQSLPSNAAANR
QIPPTLDPNIVKESSDVSLSDQRSEPASFAVDKPADDGYNWRKYGQKQVKGSEYPRSYYK
CTNPNCPVKKKVERSLDGQVTEIIYKGQHNHQPPQASKRSKECGNPNGNYNLQGPYELSS
EGLTGNFNKPKEGEPSYSLRMKDQESSQVNDQTSGSSDSEEVGNAETRVDGRDIDERESK
RRAVEVQSTEAACSHRTVAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKC
TSQGCNVRKHVERAASDPKAVITTYEGKHNHDVPAARNSSHNTANNSMSQLRPHNPVVDK
PAAMRRADFQRNEQQPIALLRFKEEQST*

Transcript Sequence

Transcript ID

PGSC0003DMT400072836
Transcript Infomation

pacid=37443388 locus=PGSC0003DMG400028335 ID=PGSC0003DMT400072836.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAAATGAAGGATCATCATCTTCTTCAACGTCAAGAGGTCAATTACTCCGTCCA
ACTATTACTTTACCGCCGAGAAGTTCTATTGAGAGTCTATTTTCAGGCGGGTCAAGCGGT
ATTAGCCCGGGTCCGATGACCCTTGTATCCAGTTTCTTCTCCGATAACGATCCAGATTCT
GAGTGTCGTTCATTTTCACAGCTTCTCGCCGGTGCAATGACACCTCCGGCGGGTTTTACC
GGTGGTAGACCGGGTTTCCCGCCACTTCCGCAACCATCTACGGCGGCGATAACTCAGTCA
CCGACTACGTTTACTGTGCCGCCTGGATTGAGTCCAACTAGTTTGTTTGATGGGTTCTTC
TCACCTGGGCAGGGTCCTTTTGGAATGTCACATCAGCAAGTGCTTGCTCAACTTACATCT
CAGGCATCCCAGGTTCAGTCTCAAATGCACATTCAGCCTAACTATCCATCTTCTGCAACG
GCAGCTGCACCATCAATGTCACAGTTCCAGTCCTTACCATCAAATGCAGCAGCAAACCGA
CAGATACCTCCCACTTTGGATCCTAACATCGTGAAAGAGTCATCAGATGTTTCCCTATCT
GATCAGAGGTCAGAACCTGCTTCCTTCGCTGTTGACAAACCTGCTGATGATGGCTACAAC
TGGCGGAAGTATGGGCAGAAGCAGGTCAAGGGAAGTGAATATCCTCGTAGCTATTACAAG
TGTACAAATCCAAATTGTCCAGTCAAGAAGAAGGTTGAGCGCTCCCTAGATGGCCAGGTG
ACTGAGATTATATACAAGGGCCAACACAACCATCAGCCACCTCAAGCTAGTAAGCGTTCA
AAAGAATGTGGAAATCCAAATGGGAACTATAATCTGCAGGGGCCCTATGAGCTCAGCTCA
GAGGGTCTGACAGGAAATTTTAACAAACCCAAGGAGGGCGAACCTTCCTACTCGTTAAGA
ATGAAGGATCAAGAATCCAGCCAAGTAAATGATCAGACCTCTGGCTCAAGTGACAGTGAG
GAAGTGGGTAATGCAGAGACTAGAGTGGACGGAAGGGACATTGATGAACGGGAATCAAAG
CGGAGGGCTGTAGAAGTACAAAGTACAGAGGCAGCTTGTTCTCACCGGACTGTTGCAGAA
CCTAGGATCATTGTTCAAACAACTAGTGAAGTTGATCTATTGGACGATGGTTATAGGTGG
CGAAAGTATGGTCAGAAGGTTGTTAAAGGAAACCCTTATCCAAGAAGCTATTACAAATGT
ACTAGCCAGGGATGTAATGTAAGAAAGCATGTTGAACGGGCTGCAAGTGACCCTAAAGCA
GTCATAACAACATATGAAGGTAAACATAATCATGATGTGCCTGCAGCCAGGAATAGTAGC
CACAATACTGCCAATAATTCTATGTCACAATTGAGGCCACACAACCCTGTAGTTGATAAA
CCAGCTGCAATGCGAAGAGCGGACTTTCAGAGAAATGAACAACAACCTATAGCGCTTCTA
CGCTTCAAAGAAGAACAAAGTACATGA