Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072824
CDS Infomation

pacid=37443903 polypeptide=PGSC0003DMP400049266 locus=PGSC0003DMG400028331 ID=PGSC0003DMT400072824.v4.03 annot-version=v4.03
Sequence

ATGGCATCCAACTCCAACTCTAATGTTGTAGTAGTTATGGTGCCCTTCCCTGAATATGGA
CACCAAATCCCTCTTCTTCGTCTCTCTCAACTTATCTCTTCCTACAATATACCAGTCCAT
TATATGAGTGTTGGAGCACGAAATCAAGAACTGAAACAACGACAACAACAACAAGAAGAA
GAATTTCCCAACATACAATTCCATGATCTTTCAATAACGTCAAAAGAAAATGACGAAGAA
AACTATATGCCTTACTTGGAATCCTTGTTACAAATTACAGAGCCTCTTTCCGCTATTTGT
CATAGCAATAATGATAAAAGAGTAGTCGTTATTCATGACGCTATAATGCAGTTTGTTGTT
GAATCTGTGTATACAATATCACACGTTGAAGCATACTTTTTTCATGCTGTATCTGCTTTC
ACTACTTACTCAATGCTCCAACAAATTAAAGAGAATTGCAATGATGATGCATTGTTTACA
AGTTTGCAAGCTTATATTCCCTCTATTGAGAGCTGTTTCAAGCCTGGAATGGGGGAATTG
ACGAAAATGCTGAGAGATTGTAAGTTCAAATGTGGAGAAATTTTGAATACTTGTAGAGAA
GTTGAAGGTCCTTATCTTGACGAACTCTGTAAACAGAGTGCTACCCCATTTTGGGGGCTT
GGTCCGTTTAATCCTATCAACATCGTCCAAAACTCTGATAAAACTCACAGATGTATTGAA
TGGCTTGATAAACAACCTGTCAATTCTGTTATATTCGTTTCGTTTGGAACTGCAAACAGT
TTCTCAATCGAACAAATTCATGAGATTGCAATTGGTTTAGAGAGATCAGAGAAGAAATTC
ATCTGGGTTTTACGAGGAAAAGATAAAAAAGGGGAAAATGTTGGAGATATTACTGGGAAG
ATTGAGCTACCAAATGGATTCGAAGAAAGAGTAGAAAACAGAGGAATCATCGCGAGAGAA
TGGGTACCTCAGACGGAAATTCTAGCTCATCCTTCTACAGGTGGTTACTTTTTTCATTCG
GGATGGAACTCTTTTCTTGAGAGTGTAACAATGGGAGTGCCAATGGCAACTTGGCCATTG
AATTCGGATAATCCGTACAATGATGTGCTTATTACAAAGGTGTTGAAAGTTGGTTTAGTG
GTGAGGGATTGGGTAAACAAAGATGAATTGATCAAATGTGATAAAATTGAAACTGGTGTG
AGAACATTGATGGATTCCGCGGAAGGGGAAGAGATGAGGAAGAGAGCGATAGAGTTGAGC
AAAGCTATTAAGATGTCCGTTGGAGATGGTGGATCACAAAAGAAGCAGATGGATTCTTTC
ATTGCTCATATCACAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400049266
PEP Infomation

pacid=37443903 transcript=PGSC0003DMT400072824 locus=PGSC0003DMG400028331 ID=PGSC0003DMT400072824.v4.03 annot-version=v4.03
Sequence

MASNSNSNVVVVMVPFPEYGHQIPLLRLSQLISSYNIPVHYMSVGARNQELKQRQQQQEE
EFPNIQFHDLSITSKENDEENYMPYLESLLQITEPLSAICHSNNDKRVVVIHDAIMQFVV
ESVYTISHVEAYFFHAVSAFTTYSMLQQIKENCNDDALFTSLQAYIPSIESCFKPGMGEL
TKMLRDCKFKCGEILNTCREVEGPYLDELCKQSATPFWGLGPFNPINIVQNSDKTHRCIE
WLDKQPVNSVIFVSFGTANSFSIEQIHEIAIGLERSEKKFIWVLRGKDKKGENVGDITGK
IELPNGFEERVENRGIIAREWVPQTEILAHPSTGGYFFHSGWNSFLESVTMGVPMATWPL
NSDNPYNDVLITKVLKVGLVVRDWVNKDELIKCDKIETGVRTLMDSAEGEEMRKRAIELS
KAIKMSVGDGGSQKKQMDSFIAHITR*

Transcript Sequence

Transcript ID

PGSC0003DMT400072824
Transcript Infomation

pacid=37443903 locus=PGSC0003DMG400028331 ID=PGSC0003DMT400072824.v4.03 annot-version=v4.03
Sequence

ATGGCATCCAACTCCAACTCTAATGTTGTAGTAGTTATGGTGCCCTTCCCTGAATATGGA
CACCAAATCCCTCTTCTTCGTCTCTCTCAACTTATCTCTTCCTACAATATACCAGTCCAT
TATATGAGTGTTGGAGCACGAAATCAAGAACTGAAACAACGACAACAACAACAAGAAGAA
GAATTTCCCAACATACAATTCCATGATCTTTCAATAACGTCAAAAGAAAATGACGAAGAA
AACTATATGCCTTACTTGGAATCCTTGTTACAAATTACAGAGCCTCTTTCCGCTATTTGT
CATAGCAATAATGATAAAAGAGTAGTCGTTATTCATGACGCTATAATGCAGTTTGTTGTT
GAATCTGTGTATACAATATCACACGTTGAAGCATACTTTTTTCATGCTGTATCTGCTTTC
ACTACTTACTCAATGCTCCAACAAATTAAAGAGAATTGCAATGATGATGCATTGTTTACA
AGTTTGCAAGCTTATATTCCCTCTATTGAGAGCTGTTTCAAGCCTGGAATGGGGGAATTG
ACGAAAATGCTGAGAGATTGTAAGTTCAAATGTGGAGAAATTTTGAATACTTGTAGAGAA
GTTGAAGGTCCTTATCTTGACGAACTCTGTAAACAGAGTGCTACCCCATTTTGGGGGCTT
GGTCCGTTTAATCCTATCAACATCGTCCAAAACTCTGATAAAACTCACAGATGTATTGAA
TGGCTTGATAAACAACCTGTCAATTCTGTTATATTCGTTTCGTTTGGAACTGCAAACAGT
TTCTCAATCGAACAAATTCATGAGATTGCAATTGGTTTAGAGAGATCAGAGAAGAAATTC
ATCTGGGTTTTACGAGGAAAAGATAAAAAAGGGGAAAATGTTGGAGATATTACTGGGAAG
ATTGAGCTACCAAATGGATTCGAAGAAAGAGTAGAAAACAGAGGAATCATCGCGAGAGAA
TGGGTACCTCAGACGGAAATTCTAGCTCATCCTTCTACAGGTGGTTACTTTTTTCATTCG
GGATGGAACTCTTTTCTTGAGAGTGTAACAATGGGAGTGCCAATGGCAACTTGGCCATTG
AATTCGGATAATCCGTACAATGATGTGCTTATTACAAAGGTGTTGAAAGTTGGTTTAGTG
GTGAGGGATTGGGTAAACAAAGATGAATTGATCAAATGTGATAAAATTGAAACTGGTGTG
AGAACATTGATGGATTCCGCGGAAGGGGAAGAGATGAGGAAGAGAGCGATAGAGTTGAGC
AAAGCTATTAAGATGTCCGTTGGAGATGGTGGATCACAAAAGAAGCAGATGGATTCTTTC
ATTGCTCATATCACAAGATGA