Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072796
CDS Infomation

pacid=37443567 polypeptide=PGSC0003DMP400049243 locus=PGSC0003DMG400028323 ID=PGSC0003DMT400072796.v4.03 annot-version=v4.03
Sequence

ATGGAAGACGATCAAGATTTGAAGTTTGTATGTAAGTTGTGTGACAAAAAATTCCTTTGT
GGGAAGTCATTAGGGGGTCATATGAGATCTCATGTAGTTGAGGAAAATGGTGAAGGAAAT
GCTGAAAAGTTTGAATCTTGGGGTAGTAGAGAAAATCCCCATCAATCAAAATTTGATGTT
GGTGGTCATTCTGGTTATGGACTTAGAGAAAATCCCAAGAAAACTTGGAGAGCTGTTGAT
TCAACTTTTTCACCTTTGCCTCCTCAAGAAAGAGTTTGTCAGCAATGTGGCAAAGTGTTT
CAGTCAATGAAAGCTTTGTGTGGTCATATGGCTAGTCATTCAGAGAAGTTAGTGATGGAT
AGTCATTCAGATACTGAAACTGATGATGATGTTGAAGAGGAGGAGGAGACAAAGATGAAG
ACCAGATCATTAAAGACTAAGAGGTACAAGAGACTTGTAGTTAAGTCTTCTAATTACTGT
TTAGTGAATAATAATAATAGTGTTGTTAATTATGGTTCATCATCTGTTTCTGAGATTGAT
GAACTAGATCAAGAGGAAGTTGTAGCAAAGTGTTTAATGATGTTGTCTAGGGATACAGGG
AATTGGAATGGTGTTAATTCAGTTGTTGAGTCTTCTGATAACAATTCTGTTGTTTTGGAG
ACAAAATCATCCTCTACTGACATGAAATTTGGTAGAAAGGATAGGCTGAAATGTGTTTAT
AATCAAAACGAAACACCGGGAACTAAGAAACTTAGTGGTTTAGATGTTGATCAAGCTGAA
TCTGAGAGCTCTGATTCTGGATACTTTTTAGATGACAATACTATAGTTGAATCGGATATA
TCTGTCGATGGATTCCATAGAAATGGGAATAGTAAATGGAGCACTTCTCAAATGAGCCAT
GCTGTTTGGTGTGATGAGTCTGGGGTTGATAAGGGGAAGGGGTTAAACAGAACCAAGAAA
TATCCAACAGAGTCAAGGAAGGATTTAACCGTGGAATGTGAATATGATGATTACGCGATA
GCTTCATATATGGAAAAATGTGAACCAAGAAAGAGAATGAAGGATAGTTCTTATCATCCA
GAATTAGGGAATAAATCCGTTAAGAAGATAAAGATCAGTCCTAAAAGTTCCGAAGGATGC
AATACTATTCAAAAGAAGAAGTATGAGTGTTTGAACTGCAAGAAGAGTTTTAACTCTTAT
CAGGCTCTTGGTGGACATAGACCGTGTCATAAAAAGGCCAACGCCTATCTCGAGTCAATA
AATGGAACTGGTGAAAGTAGTGTCGATGACAAGAATAGAGAGACATTTAGCAGTAGAACA
CCAGCTTCTACTGCTAAAGATCTGTCTTACAATCCTGAGAAAACGATTAAGCCTAAGAAA
TCCCAAAGGCATGAATGCCCATTTTGTGACCGTGTTTTCAAGTCTGGTCAAGCTTTAGGT
GGCCACAAAAGATCTCATTTTATTGTTGGAACTGAACAGAACATGAATCGATCTTCAGCA
GTCAAGAAAGTCGATGATTTACTTGATCTTAATCTCCCTGCTCCTCTTGATGATGACGAT
GATGAACATGCACACCTTGTGTCTTGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049243
PEP Infomation

pacid=37443567 transcript=PGSC0003DMT400072796 locus=PGSC0003DMG400028323 ID=PGSC0003DMT400072796.v4.03 annot-version=v4.03
Sequence

MEDDQDLKFVCKLCDKKFLCGKSLGGHMRSHVVEENGEGNAEKFESWGSRENPHQSKFDV
GGHSGYGLRENPKKTWRAVDSTFSPLPPQERVCQQCGKVFQSMKALCGHMASHSEKLVMD
SHSDTETDDDVEEEEETKMKTRSLKTKRYKRLVVKSSNYCLVNNNNSVVNYGSSSVSEID
ELDQEEVVAKCLMMLSRDTGNWNGVNSVVESSDNNSVVLETKSSSTDMKFGRKDRLKCVY
NQNETPGTKKLSGLDVDQAESESSDSGYFLDDNTIVESDISVDGFHRNGNSKWSTSQMSH
AVWCDESGVDKGKGLNRTKKYPTESRKDLTVECEYDDYAIASYMEKCEPRKRMKDSSYHP
ELGNKSVKKIKISPKSSEGCNTIQKKKYECLNCKKSFNSYQALGGHRPCHKKANAYLESI
NGTGESSVDDKNRETFSSRTPASTAKDLSYNPEKTIKPKKSQRHECPFCDRVFKSGQALG
GHKRSHFIVGTEQNMNRSSAVKKVDDLLDLNLPAPLDDDDDEHAHLVSW*

Transcript Sequence

Transcript ID

PGSC0003DMT400072796
Transcript Infomation

pacid=37443567 locus=PGSC0003DMG400028323 ID=PGSC0003DMT400072796.v4.03 annot-version=v4.03
Sequence

ATGGAAGACGATCAAGATTTGAAGTTTGTATGTAAGTTGTGTGACAAAAAATTCCTTTGT
GGGAAGTCATTAGGGGGTCATATGAGATCTCATGTAGTTGAGGAAAATGGTGAAGGAAAT
GCTGAAAAGTTTGAATCTTGGGGTAGTAGAGAAAATCCCCATCAATCAAAATTTGATGTT
GGTGGTCATTCTGGTTATGGACTTAGAGAAAATCCCAAGAAAACTTGGAGAGCTGTTGAT
TCAACTTTTTCACCTTTGCCTCCTCAAGAAAGAGTTTGTCAGCAATGTGGCAAAGTGTTT
CAGTCAATGAAAGCTTTGTGTGGTCATATGGCTAGTCATTCAGAGAAGTTAGTGATGGAT
AGTCATTCAGATACTGAAACTGATGATGATGTTGAAGAGGAGGAGGAGACAAAGATGAAG
ACCAGATCATTAAAGACTAAGAGGTACAAGAGACTTGTAGTTAAGTCTTCTAATTACTGT
TTAGTGAATAATAATAATAGTGTTGTTAATTATGGTTCATCATCTGTTTCTGAGATTGAT
GAACTAGATCAAGAGGAAGTTGTAGCAAAGTGTTTAATGATGTTGTCTAGGGATACAGGG
AATTGGAATGGTGTTAATTCAGTTGTTGAGTCTTCTGATAACAATTCTGTTGTTTTGGAG
ACAAAATCATCCTCTACTGACATGAAATTTGGTAGAAAGGATAGGCTGAAATGTGTTTAT
AATCAAAACGAAACACCGGGAACTAAGAAACTTAGTGGTTTAGATGTTGATCAAGCTGAA
TCTGAGAGCTCTGATTCTGGATACTTTTTAGATGACAATACTATAGTTGAATCGGATATA
TCTGTCGATGGATTCCATAGAAATGGGAATAGTAAATGGAGCACTTCTCAAATGAGCCAT
GCTGTTTGGTGTGATGAGTCTGGGGTTGATAAGGGGAAGGGGTTAAACAGAACCAAGAAA
TATCCAACAGAGTCAAGGAAGGATTTAACCGTGGAATGTGAATATGATGATTACGCGATA
GCTTCATATATGGAAAAATGTGAACCAAGAAAGAGAATGAAGGATAGTTCTTATCATCCA
GAATTAGGGAATAAATCCGTTAAGAAGATAAAGATCAGTCCTAAAAGTTCCGAAGGATGC
AATACTATTCAAAAGAAGAAGTATGAGTGTTTGAACTGCAAGAAGAGTTTTAACTCTTAT
CAGGCTCTTGGTGGACATAGACCGTGTCATAAAAAGGCCAACGCCTATCTCGAGTCAATA
AATGGAACTGGTGAAAGTAGTGTCGATGACAAGAATAGAGAGACATTTAGCAGTAGAACA
CCAGCTTCTACTGCTAAAGATCTGTCTTACAATCCTGAGAAAACGATTAAGCCTAAGAAA
TCCCAAAGGCATGAATGCCCATTTTGTGACCGTGTTTTCAAGTCTGGTCAAGCTTTAGGT
GGCCACAAAAGATCTCATTTTATTGTTGGAACTGAACAGAACATGAATCGATCTTCAGCA
GTCAAGAAAGTCGATGATTTACTTGATCTTAATCTCCCTGCTCCTCTTGATGATGACGAT
GATGAACATGCACACCTTGTGTCTTGGTAG