Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072758
CDS Infomation

pacid=37442253 polypeptide=PGSC0003DMP400049220 locus=PGSC0003DMG400028314 ID=PGSC0003DMT400072758.v4.03 annot-version=v4.03
Sequence

ATGTGTGGCATAGCAGTGATTGTGTCTGGAATTAAGATAGTTTTATCATCTTTAGACCCA
AATTTTATCTCTCCAATACCTCTATTGGAACAGCAGACTTTGTTTTCAGTGGATGACATA
AAAGAGGTGTTAAGAAGAAGGGGTCCAGATAGTTTGGGATGCAAGAAAGTTTTACTTCGT
TCTGGGGTTTCATCTTTACCAGGTGGGGAGCAAGATGTTGTTGCCTTTGTGGAGGATGAG
GCTCCAAGGGAGGGAAAGGATTCTCATATGGATGGTGGTGCTGCTAAAGAATTCATTAGA
GAGTTGCAATTTATTGGTGCTACATTGCAGCTTAGAGGCATAAATCCTATCATTCAACCA
TTGGTGGACATATCAGGGAACATCCTTGTTTATAATGGTGAAATATTTGGAGGCATCCAA
ATGAGTAGCGATAACAATGACACTGAAGTTCTTATGCAACATCTAGGACTGTGTTGTCCT
CGTGTTTCCTCTCCACATAATAAAGCTCATACTTCTGGAGACAGGCAAAGTACTGTTCCA
GAACTTCTTTCCAGAATCAAGGGACCTTGGGCTTTGATTTATTGGCAGAGTAGTTCAAGA
ATATTATGGTTTGGTCGAGATGCATTTGGAAGGCGAAGTCTTCTTGTTCACTGGCCAACA
AAGGAGGACCCTCGGTTTCTGCTGTCTTCTGTATCACCACATGCCTCTGTAAATGAAAGT
TCTGAATCTGCAAATGGAGATGGAATAGCCAAAATAGACTTCTGGGAAGAACTTCCATGC
GGTGTGTACAGTTTGTCTATTGGTGCTTTAGGAACAGAGGACTATTTAATTGGTGAAGTT
TTGAAGCATGACTGGACAGATCCAAAGCTTAAGGAGTTGATCACTTGGGAAAGAACTTCT
GTCCAACCAAAATCAGAGGACTTGTGTGCTTCTCACCAAAAGGTTTATAGCAGGAAAGAG
GACTCGCCTTTAACTCCTTCCATTCTGATGGAATCTAAGTTAGCTTCTACAGACTGCCTA
CTTACATCGCTACCACACAGGGTAATGATTGCTTTACAAGAGTCAATAATGCGACGCACT
GCATTAAATACAATCTACCAGGCCACTTCAGTTGACTATACAAACAAATGCAATACTCCA
GTTGCCGTGCTCTTTTCTGGTGGATTAGACTCTATGATACTTGCAGCATTACTAGATAAA
TGCATGAATGCCAAATATGAAATTGATCTGCTAAATGTAAGCTTTGACGGCCCATTTGCT
CCTGATAGAATATCTGCTAGGGCAGGCCTAAAGGAACTTCAAAAAATTGCCCCATCAAGA
AGATGGAAACTTGTAGAGATTGATGCTGATCTGCTGAAGCTGACCTCTGAAACGAAGCAT
GTCATGTCACTAATAAATCCTGCAAGGACCTACATGGATCTGAATATTGGTATTGCTCTG
TGGTTGGCTGCTAGCGGTGACGGTTGCTTGCAAGGTGAAACAGGCAACGATGATACCTGT
GGCAGTGTCAAGTACAAATCTGCGGCTCGGATTCTCCTAGTTGGTGCTGGTGCAGATGAA
CAATGTGCTGGATATGGTCGGCATAGGACAAAATATAGAAATGGAAGCTGGTTAGGTCTG
AATGATGAAATGAAACTAGACATGCAGCGGATTTGGAAGAGAAACCTAGGGAGAGATGAT
AGGTGTATTGCCGACAATGGCAAGGAGGCCAGGTTCCCTTTCTTGGATGAGGATGTCATC
AGGATTTTGCTAGATATTCCGTTGTGGGAGATCGCTGACCTTAATCAACCAATTGGTATT
GGTGACAAGAAAATCTTGCGAGAGGTTGCACATTTACTTGGTTTGTCAGAAGCAGCTTCA
CTTCCGAAAAGAGCAATTCAGTTTGGTTCAAGAATTGCAAGAGAATCAAATCGGAAGAAT
TTTGGAAGCAACCGCGCAGCCAATCAAGCATCTGCTGGAAGTGTAACAATACACAGAAAT
AACTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400049220
PEP Infomation

pacid=37442253 transcript=PGSC0003DMT400072758 locus=PGSC0003DMG400028314 ID=PGSC0003DMT400072758.v4.03 annot-version=v4.03
Sequence

MCGIAVIVSGIKIVLSSLDPNFISPIPLLEQQTLFSVDDIKEVLRRRGPDSLGCKKVLLR
SGVSSLPGGEQDVVAFVEDEAPREGKDSHMDGGAAKEFIRELQFIGATLQLRGINPIIQP
LVDISGNILVYNGEIFGGIQMSSDNNDTEVLMQHLGLCCPRVSSPHNKAHTSGDRQSTVP
ELLSRIKGPWALIYWQSSSRILWFGRDAFGRRSLLVHWPTKEDPRFLLSSVSPHASVNES
SESANGDGIAKIDFWEELPCGVYSLSIGALGTEDYLIGEVLKHDWTDPKLKELITWERTS
VQPKSEDLCASHQKVYSRKEDSPLTPSILMESKLASTDCLLTSLPHRVMIALQESIMRRT
ALNTIYQATSVDYTNKCNTPVAVLFSGGLDSMILAALLDKCMNAKYEIDLLNVSFDGPFA
PDRISARAGLKELQKIAPSRRWKLVEIDADLLKLTSETKHVMSLINPARTYMDLNIGIAL
WLAASGDGCLQGETGNDDTCGSVKYKSAARILLVGAGADEQCAGYGRHRTKYRNGSWLGL
NDEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRILLDIPLWEIADLNQPIGI
GDKKILREVAHLLGLSEAASLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVTIHRN
NS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072758
Transcript Infomation

pacid=37442253 locus=PGSC0003DMG400028314 ID=PGSC0003DMT400072758.v4.03 annot-version=v4.03
Sequence

ATGTGTGGCATAGCAGTGATTGTGTCTGGAATTAAGATAGTTTTATCATCTTTAGACCCA
AATTTTATCTCTCCAATACCTCTATTGGAACAGCAGACTTTGTTTTCAGTGGATGACATA
AAAGAGGTGTTAAGAAGAAGGGGTCCAGATAGTTTGGGATGCAAGAAAGTTTTACTTCGT
TCTGGGGTTTCATCTTTACCAGGTGGGGAGCAAGATGTTGTTGCCTTTGTGGAGGATGAG
GCTCCAAGGGAGGGAAAGGATTCTCATATGGATGGTGGTGCTGCTAAAGAATTCATTAGA
GAGTTGCAATTTATTGGTGCTACATTGCAGCTTAGAGGCATAAATCCTATCATTCAACCA
TTGGTGGACATATCAGGGAACATCCTTGTTTATAATGGTGAAATATTTGGAGGCATCCAA
ATGAGTAGCGATAACAATGACACTGAAGTTCTTATGCAACATCTAGGACTGTGTTGTCCT
CGTGTTTCCTCTCCACATAATAAAGCTCATACTTCTGGAGACAGGCAAAGTACTGTTCCA
GAACTTCTTTCCAGAATCAAGGGACCTTGGGCTTTGATTTATTGGCAGAGTAGTTCAAGA
ATATTATGGTTTGGTCGAGATGCATTTGGAAGGCGAAGTCTTCTTGTTCACTGGCCAACA
AAGGAGGACCCTCGGTTTCTGCTGTCTTCTGTATCACCACATGCCTCTGTAAATGAAAGT
TCTGAATCTGCAAATGGAGATGGAATAGCCAAAATAGACTTCTGGGAAGAACTTCCATGC
GGTGTGTACAGTTTGTCTATTGGTGCTTTAGGAACAGAGGACTATTTAATTGGTGAAGTT
TTGAAGCATGACTGGACAGATCCAAAGCTTAAGGAGTTGATCACTTGGGAAAGAACTTCT
GTCCAACCAAAATCAGAGGACTTGTGTGCTTCTCACCAAAAGGTTTATAGCAGGAAAGAG
GACTCGCCTTTAACTCCTTCCATTCTGATGGAATCTAAGTTAGCTTCTACAGACTGCCTA
CTTACATCGCTACCACACAGGGTAATGATTGCTTTACAAGAGTCAATAATGCGACGCACT
GCATTAAATACAATCTACCAGGCCACTTCAGTTGACTATACAAACAAATGCAATACTCCA
GTTGCCGTGCTCTTTTCTGGTGGATTAGACTCTATGATACTTGCAGCATTACTAGATAAA
TGCATGAATGCCAAATATGAAATTGATCTGCTAAATGTAAGCTTTGACGGCCCATTTGCT
CCTGATAGAATATCTGCTAGGGCAGGCCTAAAGGAACTTCAAAAAATTGCCCCATCAAGA
AGATGGAAACTTGTAGAGATTGATGCTGATCTGCTGAAGCTGACCTCTGAAACGAAGCAT
GTCATGTCACTAATAAATCCTGCAAGGACCTACATGGATCTGAATATTGGTATTGCTCTG
TGGTTGGCTGCTAGCGGTGACGGTTGCTTGCAAGGTGAAACAGGCAACGATGATACCTGT
GGCAGTGTCAAGTACAAATCTGCGGCTCGGATTCTCCTAGTTGGTGCTGGTGCAGATGAA
CAATGTGCTGGATATGGTCGGCATAGGACAAAATATAGAAATGGAAGCTGGTTAGGTCTG
AATGATGAAATGAAACTAGACATGCAGCGGATTTGGAAGAGAAACCTAGGGAGAGATGAT
AGGTGTATTGCCGACAATGGCAAGGAGGCCAGGTTCCCTTTCTTGGATGAGGATGTCATC
AGGATTTTGCTAGATATTCCGTTGTGGGAGATCGCTGACCTTAATCAACCAATTGGTATT
GGTGACAAGAAAATCTTGCGAGAGGTTGCACATTTACTTGGTTTGTCAGAAGCAGCTTCA
CTTCCGAAAAGAGCAATTCAGTTTGGTTCAAGAATTGCAAGAGAATCAAATCGGAAGAAT
TTTGGAAGCAACCGCGCAGCCAATCAAGCATCTGCTGGAAGTGTAACAATACACAGAAAT
AACTCATAA