Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072750
CDS Infomation

pacid=37444628 polypeptide=PGSC0003DMP400049215 locus=PGSC0003DMG400028311 ID=PGSC0003DMT400072750.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCTCTCTTTCAGCTTTTTTTCTACACTCTCCAGGCAGCATCTGCATTGGAAC
TTTTACCCAACTATGAAAGTAATGCAACTTCAAGATCTTAAACTTAAAAATAAATGGGTT
CTTATGGCAGTCTCGAAAGAAGGAACTCCAGAGGGTATAACTGAGGAATTATCGGAGACA
GAGGTGGTTGGTGCTGGGAAAAAGACTGGCAGGACATCAAAACGAGCTCCAGTTTCATCT
AGGCGAAAGAAAGTAATTGAGCCTTCGGATGATGATCCTGTGAATGATGAGGAAGCGGAA
AATACTTCAGGGTCAGTTGAAGAACCCAAAAAAATCCGGAGACGAACCCGAAAGAAAAAA
GAAACAGTGGAGAGTTCATATGGTGATTCCATATCCGATGTGGAGGGTAATGTCACTGAT
GAAGAAGCTGTAACAGAACCAGAATCAAGTGGGAAACCAAAGAAAACCCGACGAACCCGG
AAGAAAAAAGAGACAGTGGAGAGCTCATTTGAGGATTTCATGTTAGGTGAGGAGGGCAAT
GTGACAGAGGAGGAAGGCTTACCAACATCAGGGTCAAGTCAAGAGCCCATAGAAAAACGA
AAACGAACTTCAAAGAAAGCTGCTTCTAGCTCTAGTAGCCTGGAGAAAGAACCAACGCAG
AAGGCCACAAGGGGGAGGAGGAAGAAGGTTAATAATTTAGAGGATGAAGGTAGCCAGACA
GAAGTTAGTGATATTGAAGAAGAGCTACATGTTGCAAATGTTGATGCCGATAATGAGGAA
GAACTGGACTTCGATATAGATGTTGGAGAGGATATTAGCTTCACATATGGATGGCCACCC
CTTGTATGTTGCTTTGGTGCAGCACAGCATGCATTTGTTCCTTCAGGGAGGCCATCCAAT
AGACTTGTAGACCATGAATGGCATGAAAGAATGAAAGATGTAATGTGGGATCCTGAAAAG
TTTATCAGGGCTCCAGGGGGATGTTCAAGTAATGTTGCTGTGGCTCTTGCGAGCTTGGGA
GGTAAAGTTGCCTTCATGGGGAAACTTGGTGATGACGATTTTGGTCAGTCCTTGGTATAT
TTTATGAACATCAACAAAGTTCAAACACGATCAGTTCGCCTTGACAGTAAAAGAGCAACT
GCCATTACACATATGAAGATAGGTAAGAGAGGGGGCTTGAGGATGACTACCACCAAACCA
TGTGCTGAGGATTCTTTATTGAAGTCTGAGATCAATATAGATGTCCTTAAGGAGGCAAAA
ATGTTTTACTTCAATACATTCTCATTGCTTGACCCAAATATGAGATTAACCACATTACGG
GCAACAAAGATTTCGAAGAAGCTCGGAGGGGTTGTCTTTTATGATCTCAACCTTCCATCT
CCACTATGGGAATCAGGTGAAAAAGCCAAAACATTCATACAAAAAGCATGGAATCTTGCA
GATATCATAGAGGTCACGAAACAAGAGTTGGAGTTTCTATGTGGAATAGAACCCTCCGAG
AAGTTTGACACCAAGGATAATGACAGGTCTAAGTTCACTCACTATCCACCAGAAGTAATT
GCTCCACTTTGGCATGAAAATTTAAAGATTTTGTTTGTGACTAATGGGACTTCTAAGATT
CATTACTACACCAAGGAGCATAATGGTTCTGTTCTAGGGTTGGAAGATGTGCCTCTTAGC
CCTTATACTTCTGATATGTCTGCATCTGGAGATGGCATTATTGCAGGTATCATTAGAATG
CTGACAGTTCAGCCTCATCTTATGACTGATAAAGGTTACTTGGAACGAACTTTGAAGTAT
GCTATTAGCTGTGGTGTAGTAGATCAATGGCTACAGGCGAGGAGATTAGGGTATCCTCCT
AAAGAAGGTATGGAAGATGACGTGGTCCCAGACGACCATGGCATAAGGTCAGTAACAGAG
AGGGAATACAGAACACTGGTGCCTGTAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049215
PEP Infomation

pacid=37444628 transcript=PGSC0003DMT400072750 locus=PGSC0003DMG400028311 ID=PGSC0003DMT400072750.v4.03 annot-version=v4.03
Sequence

MAALSFSFFSTLSRQHLHWNFYPTMKVMQLQDLKLKNKWVLMAVSKEGTPEGITEELSET
EVVGAGKKTGRTSKRAPVSSRRKKVIEPSDDDPVNDEEAENTSGSVEEPKKIRRRTRKKK
ETVESSYGDSISDVEGNVTDEEAVTEPESSGKPKKTRRTRKKKETVESSFEDFMLGEEGN
VTEEEGLPTSGSSQEPIEKRKRTSKKAASSSSSLEKEPTQKATRGRRKKVNNLEDEGSQT
EVSDIEEELHVANVDADNEEELDFDIDVGEDISFTYGWPPLVCCFGAAQHAFVPSGRPSN
RLVDHEWHERMKDVMWDPEKFIRAPGGCSSNVAVALASLGGKVAFMGKLGDDDFGQSLVY
FMNINKVQTRSVRLDSKRATAITHMKIGKRGGLRMTTTKPCAEDSLLKSEINIDVLKEAK
MFYFNTFSLLDPNMRLTTLRATKISKKLGGVVFYDLNLPSPLWESGEKAKTFIQKAWNLA
DIIEVTKQELEFLCGIEPSEKFDTKDNDRSKFTHYPPEVIAPLWHENLKILFVTNGTSKI
HYYTKEHNGSVLGLEDVPLSPYTSDMSASGDGIIAGIIRMLTVQPHLMTDKGYLERTLKY
AISCGVVDQWLQARRLGYPPKEGMEDDVVPDDHGIRSVTEREYRTLVPVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072750
Transcript Infomation

pacid=37444628 locus=PGSC0003DMG400028311 ID=PGSC0003DMT400072750.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCTCTCTTTCAGCTTTTTTTCTACACTCTCCAGGCAGCATCTGCATTGGAAC
TTTTACCCAACTATGAAAGTAATGCAACTTCAAGATCTTAAACTTAAAAATAAATGGGTT
CTTATGGCAGTCTCGAAAGAAGGAACTCCAGAGGGTATAACTGAGGAATTATCGGAGACA
GAGGTGGTTGGTGCTGGGAAAAAGACTGGCAGGACATCAAAACGAGCTCCAGTTTCATCT
AGGCGAAAGAAAGTAATTGAGCCTTCGGATGATGATCCTGTGAATGATGAGGAAGCGGAA
AATACTTCAGGGTCAGTTGAAGAACCCAAAAAAATCCGGAGACGAACCCGAAAGAAAAAA
GAAACAGTGGAGAGTTCATATGGTGATTCCATATCCGATGTGGAGGGTAATGTCACTGAT
GAAGAAGCTGTAACAGAACCAGAATCAAGTGGGAAACCAAAGAAAACCCGACGAACCCGG
AAGAAAAAAGAGACAGTGGAGAGCTCATTTGAGGATTTCATGTTAGGTGAGGAGGGCAAT
GTGACAGAGGAGGAAGGCTTACCAACATCAGGGTCAAGTCAAGAGCCCATAGAAAAACGA
AAACGAACTTCAAAGAAAGCTGCTTCTAGCTCTAGTAGCCTGGAGAAAGAACCAACGCAG
AAGGCCACAAGGGGGAGGAGGAAGAAGGTTAATAATTTAGAGGATGAAGGTAGCCAGACA
GAAGTTAGTGATATTGAAGAAGAGCTACATGTTGCAAATGTTGATGCCGATAATGAGGAA
GAACTGGACTTCGATATAGATGTTGGAGAGGATATTAGCTTCACATATGGATGGCCACCC
CTTGTATGTTGCTTTGGTGCAGCACAGCATGCATTTGTTCCTTCAGGGAGGCCATCCAAT
AGACTTGTAGACCATGAATGGCATGAAAGAATGAAAGATGTAATGTGGGATCCTGAAAAG
TTTATCAGGGCTCCAGGGGGATGTTCAAGTAATGTTGCTGTGGCTCTTGCGAGCTTGGGA
GGTAAAGTTGCCTTCATGGGGAAACTTGGTGATGACGATTTTGGTCAGTCCTTGGTATAT
TTTATGAACATCAACAAAGTTCAAACACGATCAGTTCGCCTTGACAGTAAAAGAGCAACT
GCCATTACACATATGAAGATAGGTAAGAGAGGGGGCTTGAGGATGACTACCACCAAACCA
TGTGCTGAGGATTCTTTATTGAAGTCTGAGATCAATATAGATGTCCTTAAGGAGGCAAAA
ATGTTTTACTTCAATACATTCTCATTGCTTGACCCAAATATGAGATTAACCACATTACGG
GCAACAAAGATTTCGAAGAAGCTCGGAGGGGTTGTCTTTTATGATCTCAACCTTCCATCT
CCACTATGGGAATCAGGTGAAAAAGCCAAAACATTCATACAAAAAGCATGGAATCTTGCA
GATATCATAGAGGTCACGAAACAAGAGTTGGAGTTTCTATGTGGAATAGAACCCTCCGAG
AAGTTTGACACCAAGGATAATGACAGGTCTAAGTTCACTCACTATCCACCAGAAGTAATT
GCTCCACTTTGGCATGAAAATTTAAAGATTTTGTTTGTGACTAATGGGACTTCTAAGATT
CATTACTACACCAAGGAGCATAATGGTTCTGTTCTAGGGTTGGAAGATGTGCCTCTTAGC
CCTTATACTTCTGATATGTCTGCATCTGGAGATGGCATTATTGCAGGTATCATTAGAATG
CTGACAGTTCAGCCTCATCTTATGACTGATAAAGGTTACTTGGAACGAACTTTGAAGTAT
GCTATTAGCTGTGGTGTAGTAGATCAATGGCTACAGGCGAGGAGATTAGGGTATCCTCCT
AAAGAAGGTATGGAAGATGACGTGGTCCCAGACGACCATGGCATAAGGTCAGTAACAGAG
AGGGAATACAGAACACTGGTGCCTGTAAGTTGA