Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072746
CDS Infomation

pacid=37444867 polypeptide=PGSC0003DMP400049211 locus=PGSC0003DMG400028308 ID=PGSC0003DMT400072746.v4.03 annot-version=v4.03
Sequence

ATGGAACCTTTGAGCTATGCTTTGGAAGGGAGAGGCCTTATTTTTCCTGATAATGTTGAA
TTGTCGGTCGACACGGTTTCGAGAAGTAGAAGTATTGTAAAGGAATGGAATTTGAACCCT
TTTTGTGATGTTGATAAAAGCATTTGTGGTTTTAGTCAAGAAGTAACTGAAAGCACAGAG
TTCCTGGGATCAGGTATTGCTGATATTTTGAAGAAATCAGCAGCCAGTAACCCCTGTCCC
GGGGTTTTAAGTGGTGAAATGAGTGATGGTTGTGGTAAAATGCTATCGTCAACTTCTATG
TTTAATACATTTGAACCGATTCCTGGAGAAGTTGGACTTGGTGCCATGTTTAACCAGAGG
GCTACTAAATCTAACAATCCAATGTCATCATTGATTGATTTGAAATTGGAGGAGTTGACT
GATCATGGAGAATTAAGGACTAGTCAATCTTCGAAAGAAAGTTCGATACTTTCTTCTCCA
GAATCTTCATTGGCAGCTGGAAAAGCCCAAACAAAGAGATTGCATTCTCAGTTTTCTATC
ACTCAGGTTCGTGGTCAGAAGGAGGTGGAGTCGACAACTGTTTATAGGGAAATTAAGAGT
AATCAGTCTTTAAAGAGAAATTCGGCTTTGTCTTCAGTCAATTCGTCACTGCAGGGAAAA
AGACTACGTACTACGAATTTTCATTCCGAGATTCCTGTCTGCCAGGTTCATGGTTGTAAC
AAGGACCTGAGCTCCTCAAAAGACTATCACAAGAGACACAAAGTATGCAATGAACACTCA
AAAACTGCTATAGTCATAGTTAATGGGATTGAGCAAAGGTTTTGTCAGCAGTGTAGCAGG
TTTCACTTGCTAGCAGAATTTGATGAAGGTAAACGCAGCTGTCGCAAACGTCTTGCAGGC
CATAATGAGCGGCGGAGAAAGCCTCAATTTGATACTCACTGGGGTTCAAGATTTTTGGAT
ATGACTTCCCAAAGGAGAGTACCATTTCTTTTCCCCGAAATATTTCCCGGTAGCTTCTTT
TATCAAGAAAATTATGAAGATAATAACAACAACAAGCACCTTAAATTAGAACATAAGCCA
TTCGGCATCTCTCAATTGGCTATGTCAGTAAAAAATGAGCAATTCCCGGCGAAAAGCATC
CAGCATCATTACGGAGTGAAAAAACAAGATCCGTCCAAAGTTCTCTCTGGTGGGGAAACA
TTGTCTGTTCAAGAATTTTCCGAAGGGCAAAACTCCTCTTGTGCTCTCTCTCTTCTGTCA
GCCCACTCACAAAACCTTCTACACAATTCAACGGACGTTTCACCAACTCTACGTTGGACG
GTTGAACCAAACCATCATGTCTACATTAAAGGAGATCATCATAATCTTGAGAAATCTCCC
AGAGTTAGTGTTGCAAATAGATTGACACCAATTGAGTTATATTCATTTGACGTAGCCGAG
CAAGATGCGGTCGTTCAAGTTCCTGATAGTGATGCTGTTTCATTTGGAATTCAGAGAGAT
CACGGCCATGATCAAAGATCAAACTCTATAAATTCCAGGAACTGCCTTTCTCCGGAATTT
GGGCCTACCATGGATTTAGTGCAGTTGTCTTCGCACCTACAAAGGGTCGAGCAGCAGAAA
AATTCCGTCCAAGTGAAGCAGGAAAATGATATCTTTTGTTCCTTTACTTCCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049211
PEP Infomation

pacid=37444867 transcript=PGSC0003DMT400072746 locus=PGSC0003DMG400028308 ID=PGSC0003DMT400072746.v4.03 annot-version=v4.03
Sequence

MEPLSYALEGRGLIFPDNVELSVDTVSRSRSIVKEWNLNPFCDVDKSICGFSQEVTESTE
FLGSGIADILKKSAASNPCPGVLSGEMSDGCGKMLSSTSMFNTFEPIPGEVGLGAMFNQR
ATKSNNPMSSLIDLKLEELTDHGELRTSQSSKESSILSSPESSLAAGKAQTKRLHSQFSI
TQVRGQKEVESTTVYREIKSNQSLKRNSALSSVNSSLQGKRLRTTNFHSEIPVCQVHGCN
KDLSSSKDYHKRHKVCNEHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDEGKRSCRKRLAG
HNERRRKPQFDTHWGSRFLDMTSQRRVPFLFPEIFPGSFFYQENYEDNNNNKHLKLEHKP
FGISQLAMSVKNEQFPAKSIQHHYGVKKQDPSKVLSGGETLSVQEFSEGQNSSCALSLLS
AHSQNLLHNSTDVSPTLRWTVEPNHHVYIKGDHHNLEKSPRVSVANRLTPIELYSFDVAE
QDAVVQVPDSDAVSFGIQRDHGHDQRSNSINSRNCLSPEFGPTMDLVQLSSHLQRVEQQK
NSVQVKQENDIFCSFTST*

Transcript Sequence

Transcript ID

PGSC0003DMT400072746
Transcript Infomation

pacid=37444867 locus=PGSC0003DMG400028308 ID=PGSC0003DMT400072746.v4.03 annot-version=v4.03
Sequence

ATGGAACCTTTGAGCTATGCTTTGGAAGGGAGAGGCCTTATTTTTCCTGATAATGTTGAA
TTGTCGGTCGACACGGTTTCGAGAAGTAGAAGTATTGTAAAGGAATGGAATTTGAACCCT
TTTTGTGATGTTGATAAAAGCATTTGTGGTTTTAGTCAAGAAGTAACTGAAAGCACAGAG
TTCCTGGGATCAGGTATTGCTGATATTTTGAAGAAATCAGCAGCCAGTAACCCCTGTCCC
GGGGTTTTAAGTGGTGAAATGAGTGATGGTTGTGGTAAAATGCTATCGTCAACTTCTATG
TTTAATACATTTGAACCGATTCCTGGAGAAGTTGGACTTGGTGCCATGTTTAACCAGAGG
GCTACTAAATCTAACAATCCAATGTCATCATTGATTGATTTGAAATTGGAGGAGTTGACT
GATCATGGAGAATTAAGGACTAGTCAATCTTCGAAAGAAAGTTCGATACTTTCTTCTCCA
GAATCTTCATTGGCAGCTGGAAAAGCCCAAACAAAGAGATTGCATTCTCAGTTTTCTATC
ACTCAGGTTCGTGGTCAGAAGGAGGTGGAGTCGACAACTGTTTATAGGGAAATTAAGAGT
AATCAGTCTTTAAAGAGAAATTCGGCTTTGTCTTCAGTCAATTCGTCACTGCAGGGAAAA
AGACTACGTACTACGAATTTTCATTCCGAGATTCCTGTCTGCCAGGTTCATGGTTGTAAC
AAGGACCTGAGCTCCTCAAAAGACTATCACAAGAGACACAAAGTATGCAATGAACACTCA
AAAACTGCTATAGTCATAGTTAATGGGATTGAGCAAAGGTTTTGTCAGCAGTGTAGCAGG
TTTCACTTGCTAGCAGAATTTGATGAAGGTAAACGCAGCTGTCGCAAACGTCTTGCAGGC
CATAATGAGCGGCGGAGAAAGCCTCAATTTGATACTCACTGGGGTTCAAGATTTTTGGAT
ATGACTTCCCAAAGGAGAGTACCATTTCTTTTCCCCGAAATATTTCCCGGTAGCTTCTTT
TATCAAGAAAATTATGAAGATAATAACAACAACAAGCACCTTAAATTAGAACATAAGCCA
TTCGGCATCTCTCAATTGGCTATGTCAGTAAAAAATGAGCAATTCCCGGCGAAAAGCATC
CAGCATCATTACGGAGTGAAAAAACAAGATCCGTCCAAAGTTCTCTCTGGTGGGGAAACA
TTGTCTGTTCAAGAATTTTCCGAAGGGCAAAACTCCTCTTGTGCTCTCTCTCTTCTGTCA
GCCCACTCACAAAACCTTCTACACAATTCAACGGACGTTTCACCAACTCTACGTTGGACG
GTTGAACCAAACCATCATGTCTACATTAAAGGAGATCATCATAATCTTGAGAAATCTCCC
AGAGTTAGTGTTGCAAATAGATTGACACCAATTGAGTTATATTCATTTGACGTAGCCGAG
CAAGATGCGGTCGTTCAAGTTCCTGATAGTGATGCTGTTTCATTTGGAATTCAGAGAGAT
CACGGCCATGATCAAAGATCAAACTCTATAAATTCCAGGAACTGCCTTTCTCCGGAATTT
GGGCCTACCATGGATTTAGTGCAGTTGTCTTCGCACCTACAAAGGGTCGAGCAGCAGAAA
AATTCCGTCCAAGTGAAGCAGGAAAATGATATCTTTTGTTCCTTTACTTCCACTTGA