Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072731
CDS Infomation

pacid=37442136 polypeptide=PGSC0003DMP400049198 locus=PGSC0003DMG400028304 ID=PGSC0003DMT400072731.v4.03 annot-version=v4.03
Sequence

ATGAGTGGGGTGTCTCTAGGTGAGTCTCATGGTCGACCCCGTACTGGGAAAAAGACATCG
AGGAGGTGCAATGATGGCACAGGAGCTGATCATGTTGTTCTGATTGATGTCGAGTGTGAA
ACTTTTGGTAATGTAATTTTTATTGATGTGCCTGAATCAACCCCCAAGAGGTTTCGAGGT
AAGACAGCAGCAAAGAAAGACAAAAGACGATCTCCTTTGAGGAACATAATCTTCATCGAT
GATGATGAAAGCAATGGGAATGAATATCCTAAATTTGGTTTGGAAGATGACCGCCACTTC
TTTCATGACCCATCCCCTAGCATGAGACCATGCTCAAGCTCGAAAAGTGCTACAGAACCT
CTAGATGAAATTGGTGATGATTGTCAGTTTGTTCGAGAAAATATTTCCCCAGTGAAGTTA
TCAAAATGTAAAAGAACTTACTCTGGAAAAGCTCCTGTCCAAAATCGATATGGTTTGATG
TCTGATTCAGAGAGTAGTTCATCTGATGATGATGAGGTCATGGGGGATTATTCTGGACTG
CTTCGGGAAGAGTGGCAGAAAGCTTCGTTAAAGAGGAAAAATGATAATAGTGGTCAATCT
GGTGTTAGAGATATTAATAGTGCATCCGCTGTTGGAATTCAACCCGAGCCTGGTGAGAGT
AAAGAGCATCCGGCTTGTCCTGGTTACTCTAAATCCTCTACTGAAAAAGAAAACCTATCT
CCTAGACCAACATGTGAATCACATTGTAATGAAACTGGTAGTTTCAATGGAAAGGAGGAT
TTATTGCCTGGAGGATTTCGATGGTGGACTACCGGATCATCTGTTAAAGATAAATCAGAC
TGCAACTATTCTAATGGCAGCGTTAGTCTTAGAGAGTCTTCTATTTGCAGGAGAGCTTCA
TCAGGCATACAAATCAGTGGCAAAAAATGTGTTGATCAGGAAAATGGGAAATGGATTCCT
GATAGGACATCAGAATTAAGTTCAAACCATAATGAAACACAACCTAGAAACAGTGGTTCC
TTGTCGGAGGAGGATCTTTCGGAATCTGTATCTATGAGCCAACACAAGGATGAAAGGCAT
GATGATATGAATGGAAAAGATGGTGAGAATGTGGAGCTCTGTGTTGAGAACTGTATTACC
ACCGAAAGAGAAAGGTTCAAGGAGACCTCCGAATACAAAAAGGCACTAGAGGAAGAATTG
GCGTCCAGACAAAGAGCATTGGCAATTCAGGCACAAGAAGCCAAGAAAATGAAGCTGCTG
CTGAAAAGAAAGAAGGCTGAAAGTATGCGTTTATTAGAAATGGAAAAGAGACAAAAGCAG
CGTGTGGAGGAAATGAGAGAAACTCAAAAGAAGGACGTAGAGAATATGAACTTGAAGGAA
CAGATACGAGCTGAAGTTCGAAAGGAACTTAGTAAGCTTGAAATGACATGCCATGATATG
GCTTCGGTGTTGCACGGATTGGGAATCACTGTTGGCAATGGCACTAGTCATGAGGTTCGC
GTTGCTTACAAAAAAGCCTTGCTGAAATTTCATCCGGATAGAGCTTCACAATCTGATTTA
CAACAGCAAGTTGAAGCTGAGGAGAAATTTAAGCTCATTTCTCGAATGAAGGATAAATAC
TTACCATCTTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400049198
PEP Infomation

pacid=37442136 transcript=PGSC0003DMT400072731 locus=PGSC0003DMG400028304 ID=PGSC0003DMT400072731.v4.03 annot-version=v4.03
Sequence

MSGVSLGESHGRPRTGKKTSRRCNDGTGADHVVLIDVECETFGNVIFIDVPESTPKRFRG
KTAAKKDKRRSPLRNIIFIDDDESNGNEYPKFGLEDDRHFFHDPSPSMRPCSSSKSATEP
LDEIGDDCQFVRENISPVKLSKCKRTYSGKAPVQNRYGLMSDSESSSSDDDEVMGDYSGL
LREEWQKASLKRKNDNSGQSGVRDINSASAVGIQPEPGESKEHPACPGYSKSSTEKENLS
PRPTCESHCNETGSFNGKEDLLPGGFRWWTTGSSVKDKSDCNYSNGSVSLRESSICRRAS
SGIQISGKKCVDQENGKWIPDRTSELSSNHNETQPRNSGSLSEEDLSESVSMSQHKDERH
DDMNGKDGENVELCVENCITTERERFKETSEYKKALEEELASRQRALAIQAQEAKKMKLL
LKRKKAESMRLLEMEKRQKQRVEEMRETQKKDVENMNLKEQIRAEVRKELSKLEMTCHDM
ASVLHGLGITVGNGTSHEVRVAYKKALLKFHPDRASQSDLQQQVEAEEKFKLISRMKDKY
LPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400072731
Transcript Infomation

pacid=37442136 locus=PGSC0003DMG400028304 ID=PGSC0003DMT400072731.v4.03 annot-version=v4.03
Sequence

ATGAGTGGGGTGTCTCTAGGTGAGTCTCATGGTCGACCCCGTACTGGGAAAAAGACATCG
AGGAGGTGCAATGATGGCACAGGAGCTGATCATGTTGTTCTGATTGATGTCGAGTGTGAA
ACTTTTGGTAATGTAATTTTTATTGATGTGCCTGAATCAACCCCCAAGAGGTTTCGAGGT
AAGACAGCAGCAAAGAAAGACAAAAGACGATCTCCTTTGAGGAACATAATCTTCATCGAT
GATGATGAAAGCAATGGGAATGAATATCCTAAATTTGGTTTGGAAGATGACCGCCACTTC
TTTCATGACCCATCCCCTAGCATGAGACCATGCTCAAGCTCGAAAAGTGCTACAGAACCT
CTAGATGAAATTGGTGATGATTGTCAGTTTGTTCGAGAAAATATTTCCCCAGTGAAGTTA
TCAAAATGTAAAAGAACTTACTCTGGAAAAGCTCCTGTCCAAAATCGATATGGTTTGATG
TCTGATTCAGAGAGTAGTTCATCTGATGATGATGAGGTCATGGGGGATTATTCTGGACTG
CTTCGGGAAGAGTGGCAGAAAGCTTCGTTAAAGAGGAAAAATGATAATAGTGGTCAATCT
GGTGTTAGAGATATTAATAGTGCATCCGCTGTTGGAATTCAACCCGAGCCTGGTGAGAGT
AAAGAGCATCCGGCTTGTCCTGGTTACTCTAAATCCTCTACTGAAAAAGAAAACCTATCT
CCTAGACCAACATGTGAATCACATTGTAATGAAACTGGTAGTTTCAATGGAAAGGAGGAT
TTATTGCCTGGAGGATTTCGATGGTGGACTACCGGATCATCTGTTAAAGATAAATCAGAC
TGCAACTATTCTAATGGCAGCGTTAGTCTTAGAGAGTCTTCTATTTGCAGGAGAGCTTCA
TCAGGCATACAAATCAGTGGCAAAAAATGTGTTGATCAGGAAAATGGGAAATGGATTCCT
GATAGGACATCAGAATTAAGTTCAAACCATAATGAAACACAACCTAGAAACAGTGGTTCC
TTGTCGGAGGAGGATCTTTCGGAATCTGTATCTATGAGCCAACACAAGGATGAAAGGCAT
GATGATATGAATGGAAAAGATGGTGAGAATGTGGAGCTCTGTGTTGAGAACTGTATTACC
ACCGAAAGAGAAAGGTTCAAGGAGACCTCCGAATACAAAAAGGCACTAGAGGAAGAATTG
GCGTCCAGACAAAGAGCATTGGCAATTCAGGCACAAGAAGCCAAGAAAATGAAGCTGCTG
CTGAAAAGAAAGAAGGCTGAAAGTATGCGTTTATTAGAAATGGAAAAGAGACAAAAGCAG
CGTGTGGAGGAAATGAGAGAAACTCAAAAGAAGGACGTAGAGAATATGAACTTGAAGGAA
CAGATACGAGCTGAAGTTCGAAAGGAACTTAGTAAGCTTGAAATGACATGCCATGATATG
GCTTCGGTGTTGCACGGATTGGGAATCACTGTTGGCAATGGCACTAGTCATGAGGTTCGC
GTTGCTTACAAAAAAGCCTTGCTGAAATTTCATCCGGATAGAGCTTCACAATCTGATTTA
CAACAGCAAGTTGAAGCTGAGGAGAAATTTAAGCTCATTTCTCGAATGAAGGATAAATAC
TTACCATCTTTATGA