Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072691
CDS Infomation

pacid=37479652 polypeptide=PGSC0003DMP400049173 locus=PGSC0003DMG400028284 ID=PGSC0003DMT400072691.v4.03 annot-version=v4.03
Sequence

ATGTTGAAAAATATCATAAAGCGAGGGCATAAAAAGGTGCCTAAATCAGAAGTATCTGAT
TTTGGTCACGCGCCGCCGGCGGGGGGTAGGAATTCCGGCAATGTTTCGACGTCTGATGTA
GTGGTGAATCATGCTTCGAGAGGAAACATGGTAACGAATTCGATTCAATCACAACAGATA
CCTTCAGTGATGACATCTGCAGCTCCAGCACCGGGAAACATTGAGAACCTTCCCTTGTTT
CGTGATGTCCCGATATCCGAACGTCAAGTGTTGTTTTTTAGGAAACTACAGATTTGTTGT
TTTCAGTTTGATTTTACTGATACGATGAAATTGGTAAGGGAGAAAGAGATAAAAAGGCAA
ACACTTGTGGAGCTTGTAGAATATGTTCAATCTGGTGCTGGAAAAATCAATGAAAATAAT
CAAGAAGAAATGGCAAGGATGATATCAGTGAATATATTTCGTTGTTTACCTCCGGCGTCT
CATGAGAATACAGGATCCGAAAATGTGGAACAGGAAGAGGATGAGCCATGTCTCGAGCCA
TCTTGGCCTCATTTACAGCTTGTGTATGAATTGCTGTTGAGGTATGTGGTTTCATCAGAT
ACTGACACAAAGTTAGCTAAACGCTTTATTGATCACTCATTTGTATTGAAGTTATTGGAT
TTGTTTGATTCCGAGGACCCAAGGGAAAGAGAGTATTTGAAAACTATACTTCACCGCGTA
TATGGGAAGTTTATGGTGCATAGACCATTTATAAGGAAGGGAATCAATAACATCTTTTAT
AGGTTTATTTATGAGACAGAGAGGCACAGTGGGATAGGTGAGTTACTAGAGATTCTAGGG
AGTATTATAAATGGTTTTGCATTACCCATGAAAGAGGAACACAAGCTATTCCTTGTTCGG
GCACTCATACCACTGCACAAACCGAAAACGGTTGCCATGTATCATCAGCAATTATCCTAC
TGTATTGTTCAGTTTGTTGAAAAGGATTACAAGTTGTCTGATACGGTTATAAGGGGTTTG
TTGAAATACTGGCCTGTCACTAATTGCCAAAAAGAAGTCCTCTTTCTTCAGGAGCTTGAA
GAAGTGTTGGAGACCACACAGGCGGCAGAATTTCAGCGTTGCATGGTTCCTCTTTTTAGA
CAGATTGCTCGTTGCCTTAACAGCCCACACTTCCAGGTTGCAGAACGAGCCCTATTTCTA
TGGAACAATGAGCACATAGTGGGATTGATCGCCCAGAACCGCAATGTCATTTTCCCGATC
ATTTTTGATGCTCTGCAAAAGAACATAGATAATCATTGGAATCAAGCTATCCATGGACTG
ACTGTAAATGTTCGCAAAATGTTCATGGAAATGGATGCTAATCTGTTCGATGAGTGCCAA
AGACAGTATTCTGAGAAAGCAGCCCAGGCCACTGAACTGGAAGAGCAGCGAGAACTAAGA
TGGCAGAGATTAGCAGCAGCTGCAACACAAGGACACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049173
PEP Infomation

pacid=37479652 transcript=PGSC0003DMT400072691 locus=PGSC0003DMG400028284 ID=PGSC0003DMT400072691.v4.03 annot-version=v4.03
Sequence

MLKNIIKRGHKKVPKSEVSDFGHAPPAGGRNSGNVSTSDVVVNHASRGNMVTNSIQSQQI
PSVMTSAAPAPGNIENLPLFRDVPISERQVLFFRKLQICCFQFDFTDTMKLVREKEIKRQ
TLVELVEYVQSGAGKINENNQEEMARMISVNIFRCLPPASHENTGSENVEQEEDEPCLEP
SWPHLQLVYELLLRYVVSSDTDTKLAKRFIDHSFVLKLLDLFDSEDPREREYLKTILHRV
YGKFMVHRPFIRKGINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVR
ALIPLHKPKTVAMYHQQLSYCIVQFVEKDYKLSDTVIRGLLKYWPVTNCQKEVLFLQELE
EVLETTQAAEFQRCMVPLFRQIARCLNSPHFQVAERALFLWNNEHIVGLIAQNRNVIFPI
IFDALQKNIDNHWNQAIHGLTVNVRKMFMEMDANLFDECQRQYSEKAAQATELEEQRELR
WQRLAAAATQGH*

Transcript Sequence

Transcript ID

PGSC0003DMT400072691
Transcript Infomation

pacid=37479652 locus=PGSC0003DMG400028284 ID=PGSC0003DMT400072691.v4.03 annot-version=v4.03
Sequence

ATGTTGAAAAATATCATAAAGCGAGGGCATAAAAAGGTGCCTAAATCAGAAGTATCTGAT
TTTGGTCACGCGCCGCCGGCGGGGGGTAGGAATTCCGGCAATGTTTCGACGTCTGATGTA
GTGGTGAATCATGCTTCGAGAGGAAACATGGTAACGAATTCGATTCAATCACAACAGATA
CCTTCAGTGATGACATCTGCAGCTCCAGCACCGGGAAACATTGAGAACCTTCCCTTGTTT
CGTGATGTCCCGATATCCGAACGTCAAGTGTTGTTTTTTAGGAAACTACAGATTTGTTGT
TTTCAGTTTGATTTTACTGATACGATGAAATTGGTAAGGGAGAAAGAGATAAAAAGGCAA
ACACTTGTGGAGCTTGTAGAATATGTTCAATCTGGTGCTGGAAAAATCAATGAAAATAAT
CAAGAAGAAATGGCAAGGATGATATCAGTGAATATATTTCGTTGTTTACCTCCGGCGTCT
CATGAGAATACAGGATCCGAAAATGTGGAACAGGAAGAGGATGAGCCATGTCTCGAGCCA
TCTTGGCCTCATTTACAGCTTGTGTATGAATTGCTGTTGAGGTATGTGGTTTCATCAGAT
ACTGACACAAAGTTAGCTAAACGCTTTATTGATCACTCATTTGTATTGAAGTTATTGGAT
TTGTTTGATTCCGAGGACCCAAGGGAAAGAGAGTATTTGAAAACTATACTTCACCGCGTA
TATGGGAAGTTTATGGTGCATAGACCATTTATAAGGAAGGGAATCAATAACATCTTTTAT
AGGTTTATTTATGAGACAGAGAGGCACAGTGGGATAGGTGAGTTACTAGAGATTCTAGGG
AGTATTATAAATGGTTTTGCATTACCCATGAAAGAGGAACACAAGCTATTCCTTGTTCGG
GCACTCATACCACTGCACAAACCGAAAACGGTTGCCATGTATCATCAGCAATTATCCTAC
TGTATTGTTCAGTTTGTTGAAAAGGATTACAAGTTGTCTGATACGGTTATAAGGGGTTTG
TTGAAATACTGGCCTGTCACTAATTGCCAAAAAGAAGTCCTCTTTCTTCAGGAGCTTGAA
GAAGTGTTGGAGACCACACAGGCGGCAGAATTTCAGCGTTGCATGGTTCCTCTTTTTAGA
CAGATTGCTCGTTGCCTTAACAGCCCACACTTCCAGGTTGCAGAACGAGCCCTATTTCTA
TGGAACAATGAGCACATAGTGGGATTGATCGCCCAGAACCGCAATGTCATTTTCCCGATC
ATTTTTGATGCTCTGCAAAAGAACATAGATAATCATTGGAATCAAGCTATCCATGGACTG
ACTGTAAATGTTCGCAAAATGTTCATGGAAATGGATGCTAATCTGTTCGATGAGTGCCAA
AGACAGTATTCTGAGAAAGCAGCCCAGGCCACTGAACTGGAAGAGCAGCGAGAACTAAGA
TGGCAGAGATTAGCAGCAGCTGCAACACAAGGACACTAA