Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072673
CDS Infomation

pacid=37477971 polypeptide=PGSC0003DMP400049163 locus=PGSC0003DMG400028278 ID=PGSC0003DMT400072673.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCAAAAATCTCAACTTCACTTTGTTCTTGTACCCTTAATGTCCCCTGGCCAT
CTCATCCCTATGGTGGACTTAGCTAAATTGTTAGCACATCATGGTGTAATTGTTTCTATA
ATTTCTACACCCCTTAACACTATCAGATTCAAATCAGGTATTGATTCCTCTATCAAATCA
GGCCTTCAGATTAGAGTACATGAACTCAAATTTCCAGCAGTACAAGTTGGCTTGCCTGAG
GGATGTGAGAACATGGATTCTTTACCTTCACGCGATTCGATCAGGGATTTCTTTCTTGCT
GCTAGCATGTTGCAAAAACCATTTGAAGAATTGTTCAGTGATCTTAAGCCTAGTCCTTGT
TGCATAATATCTGGGAAAAACATGGCGTGGACTGTCGATAGTGCGCGTAAGTTTAGAGTT
CCTAGGATTTTCTTTGATGGTATGGGCTGTTTTTCTGCTACATGCACACAGAAGTTACAG
AGTTCCAAAGTTCATGAGAATGTGTCAAAGTTTGAGTCTTTTGTTGTACCAGGTTTGCCT
CATAGAATTGAGCTGACTAAAGCACAATTGCCTGAAAATCTGAATCCAGGTTCACCTGAC
TTAGTCGATGTTCGCAATAAGATGGTTGCTGCTGAATCCATCTCAGATGGGATTATTGTC
AATACATTTGAAGAACTGGAGCTTGACTATGTTAAAGAATTCAAGAAGATCAAAAGTGGG
AAAGTCTGGTGCATTGGCCCTGTCTCAGCTTGCAACAAATCGGAATCTGAAAAGGCTGCA
AGGGGCAAAAATGTGTCTTTGGAACAGAACCAATGCATCAAGTGGCTTGACTTGCAAGAA
CCAAACTCTGTGGTTTATGCAAGTCTTGGTAGCATATGTGGCCTAACATGTTCACAGCTT
GTGGAACTTGGGTTAGGCTTAGAAGCATCAAATAGGCCATTCCTATGGGTACTGAGAGGA
GGAGAGAAATCAAAAGAGTTAGAGAAATGGATTGAAGAAGAAAAATTTGAAGAGAGGATT
CAAGGAAGAGGCTTTTTAATAAAAGGCTGGTCTCCTCAAATTCTTGTCTTGTCTCATCCA
TCTGTAGGCGCTTTCTTAACGCACTGTGGATGGAATTCGACTCTAGAAGGGTGCTGTTCC
GGTTTACCTATAATTACTTGTCCATTGTTTGCTGAACAGTTTATTAATGAGAAATTGATC
ACACAAGTGTTAGGCACTGGTGTCAGTGTGGGAGTCAAGGCTGCTGTTGCATGGGGAATG
GAAGAAAAATCAGGACTAGTTATGAAGCGTGAAGGCGTAAAGAACGCCATTGAGACAATC
TTCGATGAGGGTGTAGAAGGAGAAGATCGGCGTAGAAAGGCAAAAGAGATCGCGAAAATG
GCGGAGAGCGCATTAGAGGAAGATGGCTCATCTTACATAAACATAGAGACTTTGATTCAT
GATATTATGCGACAGAGTTTGAGCAGTGTTGAAGCAAGTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049163
PEP Infomation

pacid=37477971 transcript=PGSC0003DMT400072673 locus=PGSC0003DMG400028278 ID=PGSC0003DMT400072673.v4.03 annot-version=v4.03
Sequence

MAAQKSQLHFVLVPLMSPGHLIPMVDLAKLLAHHGVIVSIISTPLNTIRFKSGIDSSIKS
GLQIRVHELKFPAVQVGLPEGCENMDSLPSRDSIRDFFLAASMLQKPFEELFSDLKPSPC
CIISGKNMAWTVDSARKFRVPRIFFDGMGCFSATCTQKLQSSKVHENVSKFESFVVPGLP
HRIELTKAQLPENLNPGSPDLVDVRNKMVAAESISDGIIVNTFEELELDYVKEFKKIKSG
KVWCIGPVSACNKSESEKAARGKNVSLEQNQCIKWLDLQEPNSVVYASLGSICGLTCSQL
VELGLGLEASNRPFLWVLRGGEKSKELEKWIEEEKFEERIQGRGFLIKGWSPQILVLSHP
SVGAFLTHCGWNSTLEGCCSGLPIITCPLFAEQFINEKLITQVLGTGVSVGVKAAVAWGM
EEKSGLVMKREGVKNAIETIFDEGVEGEDRRRKAKEIAKMAESALEEDGSSYINIETLIH
DIMRQSLSSVEASS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072673
Transcript Infomation

pacid=37477971 locus=PGSC0003DMG400028278 ID=PGSC0003DMT400072673.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTCAAAAATCTCAACTTCACTTTGTTCTTGTACCCTTAATGTCCCCTGGCCAT
CTCATCCCTATGGTGGACTTAGCTAAATTGTTAGCACATCATGGTGTAATTGTTTCTATA
ATTTCTACACCCCTTAACACTATCAGATTCAAATCAGGTATTGATTCCTCTATCAAATCA
GGCCTTCAGATTAGAGTACATGAACTCAAATTTCCAGCAGTACAAGTTGGCTTGCCTGAG
GGATGTGAGAACATGGATTCTTTACCTTCACGCGATTCGATCAGGGATTTCTTTCTTGCT
GCTAGCATGTTGCAAAAACCATTTGAAGAATTGTTCAGTGATCTTAAGCCTAGTCCTTGT
TGCATAATATCTGGGAAAAACATGGCGTGGACTGTCGATAGTGCGCGTAAGTTTAGAGTT
CCTAGGATTTTCTTTGATGGTATGGGCTGTTTTTCTGCTACATGCACACAGAAGTTACAG
AGTTCCAAAGTTCATGAGAATGTGTCAAAGTTTGAGTCTTTTGTTGTACCAGGTTTGCCT
CATAGAATTGAGCTGACTAAAGCACAATTGCCTGAAAATCTGAATCCAGGTTCACCTGAC
TTAGTCGATGTTCGCAATAAGATGGTTGCTGCTGAATCCATCTCAGATGGGATTATTGTC
AATACATTTGAAGAACTGGAGCTTGACTATGTTAAAGAATTCAAGAAGATCAAAAGTGGG
AAAGTCTGGTGCATTGGCCCTGTCTCAGCTTGCAACAAATCGGAATCTGAAAAGGCTGCA
AGGGGCAAAAATGTGTCTTTGGAACAGAACCAATGCATCAAGTGGCTTGACTTGCAAGAA
CCAAACTCTGTGGTTTATGCAAGTCTTGGTAGCATATGTGGCCTAACATGTTCACAGCTT
GTGGAACTTGGGTTAGGCTTAGAAGCATCAAATAGGCCATTCCTATGGGTACTGAGAGGA
GGAGAGAAATCAAAAGAGTTAGAGAAATGGATTGAAGAAGAAAAATTTGAAGAGAGGATT
CAAGGAAGAGGCTTTTTAATAAAAGGCTGGTCTCCTCAAATTCTTGTCTTGTCTCATCCA
TCTGTAGGCGCTTTCTTAACGCACTGTGGATGGAATTCGACTCTAGAAGGGTGCTGTTCC
GGTTTACCTATAATTACTTGTCCATTGTTTGCTGAACAGTTTATTAATGAGAAATTGATC
ACACAAGTGTTAGGCACTGGTGTCAGTGTGGGAGTCAAGGCTGCTGTTGCATGGGGAATG
GAAGAAAAATCAGGACTAGTTATGAAGCGTGAAGGCGTAAAGAACGCCATTGAGACAATC
TTCGATGAGGGTGTAGAAGGAGAAGATCGGCGTAGAAAGGCAAAAGAGATCGCGAAAATG
GCGGAGAGCGCATTAGAGGAAGATGGCTCATCTTACATAAACATAGAGACTTTGATTCAT
GATATTATGCGACAGAGTTTGAGCAGTGTTGAAGCAAGTTCTTGA