Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072656
CDS Infomation

pacid=37479819 polypeptide=PGSC0003DMP400049154 locus=PGSC0003DMG400028272 ID=PGSC0003DMT400072656.v4.03 annot-version=v4.03
Sequence

ATGAATTCAAGTTCTTTAAAGGTTTTATGGTTTATTTTGCCATTATTTTTGGTTGCTGCT
TTTGTTGTTATCAATAATCCACAAGGTTCCAAATTTTGGTTATCAATTTCTCATCATCAT
TATTTAAAGACTCTCAATAATGGTTCTTCAACAAAGGCAATTGATGAGAAAGATGAGGTC
CCTATTATTAATGTAAATAAGAGCACAACAACACCAAAAAGATTTAGCAAAATAGAGAAA
TTGGAAGCAGGACTTGCAAGAGCTAGAGCTGCAATATTATTATTAAGACAAAACAAAAGT
AATCATATAGAAGAAGAAGAAGAAGATGATGAGTATATCCCTCATGGTCCTATGTACTTG
AATGCTACTTCCTTCCACAGGAGCTATTTGGAAATGGAGAAAAAATTCAAGGTATATGTG
TACAAAGAAGGGGAACCCCCATTATATCATTTTGGTCCATGCAAACAAACATATGCTATT
GAAGGTTATTTTATTCAAGCAATAGAAGTAAGCAAATTCAGAACAGAAAATCCAAACAAA
GCTCATGTATACTTCTTGCCATTAAGTGTTACAATGTTAATTGAATTCATATATGTGGCT
GAATCACATGAATGGGGTCTCATGAAGAACACAACAATGGATTATGTCAATGTCATTTCT
CAAAAGTATCCTTACTGGAATAGAAGTCTTGGTGCTGATCATTTCATGCTTGCTTGTCAT
GATTGGGCCCCTGAAATTTCCTTTGCTATACCACACTTGTACAAAAACTCAATTAGAGCT
TTATGCAATGCCAATACCTCAGAAAAATTCAATCCAACAAAGGATGTTTCAATTCCAGAA
ATCCATCTCCCTTTAGGTACAACCAAAGGCCTACTAGGCGGTCCACCGCCCTCCGATCGC
CCCGTTCTCGTGTTCTTTGCCGGAGGTGTTCATGGTCCAATTAGGCCAATTTTGTTACAA
CATTGGGAAAATAGTAAAGATGAAGATGTTCAAATTCACAAGTACTTACCAAAAGGTGTT
TCATATTATGACATGATAAGAAAGAGTAAATATTGTATATGTCCAAGTGGATATGAAGTT
GCAAGTCCAAGAATGGTTGAGGGACTTTACATGGGATGTGTACCTGTCTTAATTAAGGAT
AATTATGTGACACCTTTTAGTGATGTACTTGATTGGGACACATTTGTTGTTACAATTCAT
GTTAAGGATATTCCTAAGCTTAAGAAAATTCTTATGGATATTCCTCAAGATAAGTATTTG
GAGATGCAAAAGAGGGGAATTCAAATGAGGAGGCATTTTGAGGTTAATTCACCTCCAAAA
AGATATGATGTGTTTCATATGATTCTTCATTCGATTTGGCTTCGAAGACTTAATTTTCGA
GTTCATGATGTTGATGAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049154
PEP Infomation

pacid=37479819 transcript=PGSC0003DMT400072656 locus=PGSC0003DMG400028272 ID=PGSC0003DMT400072656.v4.03 annot-version=v4.03
Sequence

MNSSSLKVLWFILPLFLVAAFVVINNPQGSKFWLSISHHHYLKTLNNGSSTKAIDEKDEV
PIINVNKSTTTPKRFSKIEKLEAGLARARAAILLLRQNKSNHIEEEEEDDEYIPHGPMYL
NATSFHRSYLEMEKKFKVYVYKEGEPPLYHFGPCKQTYAIEGYFIQAIEVSKFRTENPNK
AHVYFLPLSVTMLIEFIYVAESHEWGLMKNTTMDYVNVISQKYPYWNRSLGADHFMLACH
DWAPEISFAIPHLYKNSIRALCNANTSEKFNPTKDVSIPEIHLPLGTTKGLLGGPPPSDR
PVLVFFAGGVHGPIRPILLQHWENSKDEDVQIHKYLPKGVSYYDMIRKSKYCICPSGYEV
ASPRMVEGLYMGCVPVLIKDNYVTPFSDVLDWDTFVVTIHVKDIPKLKKILMDIPQDKYL
EMQKRGIQMRRHFEVNSPPKRYDVFHMILHSIWLRRLNFRVHDVDES*

Transcript Sequence

Transcript ID

PGSC0003DMT400072656
Transcript Infomation

pacid=37479819 locus=PGSC0003DMG400028272 ID=PGSC0003DMT400072656.v4.03 annot-version=v4.03
Sequence

ATGAATTCAAGTTCTTTAAAGGTTTTATGGTTTATTTTGCCATTATTTTTGGTTGCTGCT
TTTGTTGTTATCAATAATCCACAAGGTTCCAAATTTTGGTTATCAATTTCTCATCATCAT
TATTTAAAGACTCTCAATAATGGTTCTTCAACAAAGGCAATTGATGAGAAAGATGAGGTC
CCTATTATTAATGTAAATAAGAGCACAACAACACCAAAAAGATTTAGCAAAATAGAGAAA
TTGGAAGCAGGACTTGCAAGAGCTAGAGCTGCAATATTATTATTAAGACAAAACAAAAGT
AATCATATAGAAGAAGAAGAAGAAGATGATGAGTATATCCCTCATGGTCCTATGTACTTG
AATGCTACTTCCTTCCACAGGAGCTATTTGGAAATGGAGAAAAAATTCAAGGTATATGTG
TACAAAGAAGGGGAACCCCCATTATATCATTTTGGTCCATGCAAACAAACATATGCTATT
GAAGGTTATTTTATTCAAGCAATAGAAGTAAGCAAATTCAGAACAGAAAATCCAAACAAA
GCTCATGTATACTTCTTGCCATTAAGTGTTACAATGTTAATTGAATTCATATATGTGGCT
GAATCACATGAATGGGGTCTCATGAAGAACACAACAATGGATTATGTCAATGTCATTTCT
CAAAAGTATCCTTACTGGAATAGAAGTCTTGGTGCTGATCATTTCATGCTTGCTTGTCAT
GATTGGGCCCCTGAAATTTCCTTTGCTATACCACACTTGTACAAAAACTCAATTAGAGCT
TTATGCAATGCCAATACCTCAGAAAAATTCAATCCAACAAAGGATGTTTCAATTCCAGAA
ATCCATCTCCCTTTAGGTACAACCAAAGGCCTACTAGGCGGTCCACCGCCCTCCGATCGC
CCCGTTCTCGTGTTCTTTGCCGGAGGTGTTCATGGTCCAATTAGGCCAATTTTGTTACAA
CATTGGGAAAATAGTAAAGATGAAGATGTTCAAATTCACAAGTACTTACCAAAAGGTGTT
TCATATTATGACATGATAAGAAAGAGTAAATATTGTATATGTCCAAGTGGATATGAAGTT
GCAAGTCCAAGAATGGTTGAGGGACTTTACATGGGATGTGTACCTGTCTTAATTAAGGAT
AATTATGTGACACCTTTTAGTGATGTACTTGATTGGGACACATTTGTTGTTACAATTCAT
GTTAAGGATATTCCTAAGCTTAAGAAAATTCTTATGGATATTCCTCAAGATAAGTATTTG
GAGATGCAAAAGAGGGGAATTCAAATGAGGAGGCATTTTGAGGTTAATTCACCTCCAAAA
AGATATGATGTGTTTCATATGATTCTTCATTCGATTTGGCTTCGAAGACTTAATTTTCGA
GTTCATGATGTTGATGAATCTTGA