Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072645
CDS Infomation

pacid=37479037 polypeptide=PGSC0003DMP400049144 locus=PGSC0003DMG400028268 ID=PGSC0003DMT400072645.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTCTAAAACAGAAATATGGCCCTGTTTTGTGGTTAAAACTTGGCACCTCAACA
AATATTATGGTTGTTCAAACAGCTCAGGCTGCTGCAGAGTTATTCAAGAACCATGATATT
TCCTTTGCGGATCGATTCATACCTGATGTAAATCAGGCACATAGTTACTATCAAGGGTCC
TTGGCTTTAGCCCCATATGGTCCCTTTTGGCGGTTTCAAAGACGGATATGTACTGTGGAA
ATGTTTGTACACAAAAAAATCAGTGAAACAGTGCCAGTAAGGCGAAAATGTGTGGATAAT
ATGTTAAAATGGATAGAAAAAGCAGCAAATTCTGCTGAAAAAGGAAGTGGAATTGAGGTA
ACGCGGTTTGTGTTCCTAGCATCGTTTAATATGCTAGGGAATTTGATTCTATCGAAAAAC
TTGGCTGATCCAGAATCCGAGGAGGCCTCGGAGTTCTTCAATGCCATGAAGGGGATTATG
GAGTGGTCAGGTATTACTAATGTTTCTGATATATTTCCGTTTCTTAGAAAGTTTGATTTA
CAAAGTTTGAGGAAGAAGATGACACGAGACATGGGGAAGGCCATTGAGATCATGTCTATG
TTTCTCAAGGAACGCGAGGAAGAACGAAAGAAAGGTATGGAGAAGAGGAAAGATTTCTTG
GATGTTTTGCTTGAATTCGAAGGCACTGGAAAAGATGAACCAGCTAAATTATCAGAACAT
GAGATCAAAATATTCATATTGGAAATATTTTTAGCCGGTTCAGAGACGACTAGCAACAGC
GTAGAATGGGCACTAACAGAGCTTTTGCGCCATCCAGAAGCAATGGCCAAAGTGAAAACA
GAGATATCAAAAGTTATAGGACCAAACAGGAAGTTTGAAGAAAGTGACATCGAAAACCTT
CCTTATATGCAATCTGTAATCAAAGAATCGCTTCGTTTACATCCTCCTCTGCCTTTCTTG
CTCCCAAGAGAGACAATTCAAGACACCAAGTTCATGGGGTACGACGTGCCAAAAGGTACT
CGAGTCCTTGTAAATGCTTGGGCAATTGGAAGAGATCCTGAATGTTGGGACGACCCTATG
AGTTTCAAGCCCGAGAGGTTTCTTGGCTCTAAATTAGATGTGAAGGGTCAGCATTATGAG
CTAATTCCATTTGGTGCTGGACGGAGGATGTGTGTTGGTTTGCCTTTAGGCCATCGAATG
ATGCATTTCGCTCTAGGATCGTTGCTTCACGAATTCGAATGGGAGCTTCCTGATGGTGTC
TCTCCTAAATCTATTAATATGGATGAAAGCATGGGTGCAACAGCCAGAAAACGCGACTCC
TTGAAAGTAATACCAAAAAAGGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049144
PEP Infomation

pacid=37479037 transcript=PGSC0003DMT400072645 locus=PGSC0003DMG400028268 ID=PGSC0003DMT400072645.v4.03 annot-version=v4.03
Sequence

MSVLKQKYGPVLWLKLGTSTNIMVVQTAQAAAELFKNHDISFADRFIPDVNQAHSYYQGS
LALAPYGPFWRFQRRICTVEMFVHKKISETVPVRRKCVDNMLKWIEKAANSAEKGSGIEV
TRFVFLASFNMLGNLILSKNLADPESEEASEFFNAMKGIMEWSGITNVSDIFPFLRKFDL
QSLRKKMTRDMGKAIEIMSMFLKEREEERKKGMEKRKDFLDVLLEFEGTGKDEPAKLSEH
EIKIFILEIFLAGSETTSNSVEWALTELLRHPEAMAKVKTEISKVIGPNRKFEESDIENL
PYMQSVIKESLRLHPPLPFLLPRETIQDTKFMGYDVPKGTRVLVNAWAIGRDPECWDDPM
SFKPERFLGSKLDVKGQHYELIPFGAGRRMCVGLPLGHRMMHFALGSLLHEFEWELPDGV
SPKSINMDESMGATARKRDSLKVIPKKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400072645
Transcript Infomation

pacid=37479037 locus=PGSC0003DMG400028268 ID=PGSC0003DMT400072645.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTCTAAAACAGAAATATGGCCCTGTTTTGTGGTTAAAACTTGGCACCTCAACA
AATATTATGGTTGTTCAAACAGCTCAGGCTGCTGCAGAGTTATTCAAGAACCATGATATT
TCCTTTGCGGATCGATTCATACCTGATGTAAATCAGGCACATAGTTACTATCAAGGGTCC
TTGGCTTTAGCCCCATATGGTCCCTTTTGGCGGTTTCAAAGACGGATATGTACTGTGGAA
ATGTTTGTACACAAAAAAATCAGTGAAACAGTGCCAGTAAGGCGAAAATGTGTGGATAAT
ATGTTAAAATGGATAGAAAAAGCAGCAAATTCTGCTGAAAAAGGAAGTGGAATTGAGGTA
ACGCGGTTTGTGTTCCTAGCATCGTTTAATATGCTAGGGAATTTGATTCTATCGAAAAAC
TTGGCTGATCCAGAATCCGAGGAGGCCTCGGAGTTCTTCAATGCCATGAAGGGGATTATG
GAGTGGTCAGGTATTACTAATGTTTCTGATATATTTCCGTTTCTTAGAAAGTTTGATTTA
CAAAGTTTGAGGAAGAAGATGACACGAGACATGGGGAAGGCCATTGAGATCATGTCTATG
TTTCTCAAGGAACGCGAGGAAGAACGAAAGAAAGGTATGGAGAAGAGGAAAGATTTCTTG
GATGTTTTGCTTGAATTCGAAGGCACTGGAAAAGATGAACCAGCTAAATTATCAGAACAT
GAGATCAAAATATTCATATTGGAAATATTTTTAGCCGGTTCAGAGACGACTAGCAACAGC
GTAGAATGGGCACTAACAGAGCTTTTGCGCCATCCAGAAGCAATGGCCAAAGTGAAAACA
GAGATATCAAAAGTTATAGGACCAAACAGGAAGTTTGAAGAAAGTGACATCGAAAACCTT
CCTTATATGCAATCTGTAATCAAAGAATCGCTTCGTTTACATCCTCCTCTGCCTTTCTTG
CTCCCAAGAGAGACAATTCAAGACACCAAGTTCATGGGGTACGACGTGCCAAAAGGTACT
CGAGTCCTTGTAAATGCTTGGGCAATTGGAAGAGATCCTGAATGTTGGGACGACCCTATG
AGTTTCAAGCCCGAGAGGTTTCTTGGCTCTAAATTAGATGTGAAGGGTCAGCATTATGAG
CTAATTCCATTTGGTGCTGGACGGAGGATGTGTGTTGGTTTGCCTTTAGGCCATCGAATG
ATGCATTTCGCTCTAGGATCGTTGCTTCACGAATTCGAATGGGAGCTTCCTGATGGTGTC
TCTCCTAAATCTATTAATATGGATGAAAGCATGGGTGCAACAGCCAGAAAACGCGACTCC
TTGAAAGTAATACCAAAAAAGGCTTGA