Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072644
CDS Infomation

pacid=37480027 polypeptide=PGSC0003DMP400049143 locus=PGSC0003DMG400028267 ID=PGSC0003DMT400072644.v4.03 annot-version=v4.03
Sequence

ATGGATCGGTTTTCATCGACAACTCTGTTTCCTGATACACTTGCTGGTACAAGAGATGAT
TTAACAGAGCAATTGACGATAATTTGGGAACAGATAAAAGCTCCATTAATTGTTCCACTT
CTTAGAATCGCGGTGTTTTTGTGTCTGTTAATGTCGATTTTGCTCTTCATTGAGAGAGTT
TATATGGGGATTGTGATTACGCTAGTGAAACTTTTCGGTCGAAAATCAGATAAACGTTAT
AAATGGGAATCTTTAAAAGATGATGTTGAGATTGGGAATTCATGTTATCCTATGGTTCTT
GTTCAAATTCCAATGTATAATGAAAAAGAGGTTTATCAGCTTTCAATTGGTGCTGCATGT
GGACTTTCATGGCCTTCTGATCGTATTATAATCCAAGTTCTTGATGATTCAACTGATCCT
ATTATCAAGAATTTGGTGTCGATGGAGTGCCAGAGATGGGCAAGCAAAGGGATAGATATA
AGATATGAAATAAGAGACAACAGAAATGGGTACAAAGCAGGAGCATTGAAGGAAGGATTG
AAACATCCATATGTGAAACAATGTGATTATGTTGCTATATTTGATGCTGATTTTCAACCT
GAGCCTGATTTTCTTTGGCGCACCATTCCATTTCTAGTTCACAATCCTCAACTCGGACTT
GTTCAAGCTCGTTGGAAATTCGTGAATGCTGATGAATGCTTGATGACAAGGATGCAAGAA
ATGTCCCTGGATTATCATTTCACAGTGGAGCAAGAAGTGGGCTCTTCCACCTATGCTTTT
TTTGGCTTTAATGGGACAGCCGGTGTTTGGAGAATTGCCGCATTAGAGGAGGCTGGAGGT
TGGAAGGATAGGACAACAGTCGAGGATATGGACCTGGCTGTCCGCGCTAGTCTCAAGGGC
TGGAAATTCTTGTACCTTTCTGCTCTCAAGGTGAAAAATGAATTACCAAGTACATTCAAG
GCGTATCGCTATCAACAACATCGTTGGTCCTGTGGCCCGGCCAATCTTTTCAGGAAAATG
TTTATGGAGATCATAAGAAACAAGAAAGTATCATTGTGGAAGAAGATTCATGTGATTTAC
AGCTTCTTCTTTGTAAGGAAAGTTGTAGCTCACATTGTGACATTTGTGTTCTACTGTGTT
GTACTACCTGCAACTGTATTAGTACCTGAAGTTGAGGTTCCGAAATGGGGTGCTGTTTAC
ATTCCATCCATTATTACAATACTCAACGCAGTTGGAACTCCACGGTCGTTCCATCTGATA
ATATTTTGGATCCTTTTCGAGAATGTCATGTCACTACATCGAACAAAGGCTACGTTCATT
GGATTGTTAGAGGCAGGAAGAGTCAACGAATGGATTGTCACAGAGAAACTAGGGGATGTT
CTCAAGATGAAATCAGCCAGCAAAGCAGTTAAGAAACCTCGATTTAGGGTCGGTGACAGA
CTTCTTTTGTTAGAGCTAGCCACTGGTGCTTACCTCTTCTTTTGTGGATGTTACGACGTC
GCCTTTGGGAAAAATCACTATTTCTTGTACCTCTTCATTCAAGCATTCGCCTTCTTCATC
ATCGGATTTGGTCATATTGGTACTTTTGTTCCCAACTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049143
PEP Infomation

pacid=37480027 transcript=PGSC0003DMT400072644 locus=PGSC0003DMG400028267 ID=PGSC0003DMT400072644.v4.03 annot-version=v4.03
Sequence

MDRFSSTTLFPDTLAGTRDDLTEQLTIIWEQIKAPLIVPLLRIAVFLCLLMSILLFIERV
YMGIVITLVKLFGRKSDKRYKWESLKDDVEIGNSCYPMVLVQIPMYNEKEVYQLSIGAAC
GLSWPSDRIIIQVLDDSTDPIIKNLVSMECQRWASKGIDIRYEIRDNRNGYKAGALKEGL
KHPYVKQCDYVAIFDADFQPEPDFLWRTIPFLVHNPQLGLVQARWKFVNADECLMTRMQE
MSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALEEAGGWKDRTTVEDMDLAVRASLKG
WKFLYLSALKVKNELPSTFKAYRYQQHRWSCGPANLFRKMFMEIIRNKKVSLWKKIHVIY
SFFFVRKVVAHIVTFVFYCVVLPATVLVPEVEVPKWGAVYIPSIITILNAVGTPRSFHLI
IFWILFENVMSLHRTKATFIGLLEAGRVNEWIVTEKLGDVLKMKSASKAVKKPRFRVGDR
LLLLELATGAYLFFCGCYDVAFGKNHYFLYLFIQAFAFFIIGFGHIGTFVPNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072644
Transcript Infomation

pacid=37480027 locus=PGSC0003DMG400028267 ID=PGSC0003DMT400072644.v4.03 annot-version=v4.03
Sequence

ATGGATCGGTTTTCATCGACAACTCTGTTTCCTGATACACTTGCTGGTACAAGAGATGAT
TTAACAGAGCAATTGACGATAATTTGGGAACAGATAAAAGCTCCATTAATTGTTCCACTT
CTTAGAATCGCGGTGTTTTTGTGTCTGTTAATGTCGATTTTGCTCTTCATTGAGAGAGTT
TATATGGGGATTGTGATTACGCTAGTGAAACTTTTCGGTCGAAAATCAGATAAACGTTAT
AAATGGGAATCTTTAAAAGATGATGTTGAGATTGGGAATTCATGTTATCCTATGGTTCTT
GTTCAAATTCCAATGTATAATGAAAAAGAGGTTTATCAGCTTTCAATTGGTGCTGCATGT
GGACTTTCATGGCCTTCTGATCGTATTATAATCCAAGTTCTTGATGATTCAACTGATCCT
ATTATCAAGAATTTGGTGTCGATGGAGTGCCAGAGATGGGCAAGCAAAGGGATAGATATA
AGATATGAAATAAGAGACAACAGAAATGGGTACAAAGCAGGAGCATTGAAGGAAGGATTG
AAACATCCATATGTGAAACAATGTGATTATGTTGCTATATTTGATGCTGATTTTCAACCT
GAGCCTGATTTTCTTTGGCGCACCATTCCATTTCTAGTTCACAATCCTCAACTCGGACTT
GTTCAAGCTCGTTGGAAATTCGTGAATGCTGATGAATGCTTGATGACAAGGATGCAAGAA
ATGTCCCTGGATTATCATTTCACAGTGGAGCAAGAAGTGGGCTCTTCCACCTATGCTTTT
TTTGGCTTTAATGGGACAGCCGGTGTTTGGAGAATTGCCGCATTAGAGGAGGCTGGAGGT
TGGAAGGATAGGACAACAGTCGAGGATATGGACCTGGCTGTCCGCGCTAGTCTCAAGGGC
TGGAAATTCTTGTACCTTTCTGCTCTCAAGGTGAAAAATGAATTACCAAGTACATTCAAG
GCGTATCGCTATCAACAACATCGTTGGTCCTGTGGCCCGGCCAATCTTTTCAGGAAAATG
TTTATGGAGATCATAAGAAACAAGAAAGTATCATTGTGGAAGAAGATTCATGTGATTTAC
AGCTTCTTCTTTGTAAGGAAAGTTGTAGCTCACATTGTGACATTTGTGTTCTACTGTGTT
GTACTACCTGCAACTGTATTAGTACCTGAAGTTGAGGTTCCGAAATGGGGTGCTGTTTAC
ATTCCATCCATTATTACAATACTCAACGCAGTTGGAACTCCACGGTCGTTCCATCTGATA
ATATTTTGGATCCTTTTCGAGAATGTCATGTCACTACATCGAACAAAGGCTACGTTCATT
GGATTGTTAGAGGCAGGAAGAGTCAACGAATGGATTGTCACAGAGAAACTAGGGGATGTT
CTCAAGATGAAATCAGCCAGCAAAGCAGTTAAGAAACCTCGATTTAGGGTCGGTGACAGA
CTTCTTTTGTTAGAGCTAGCCACTGGTGCTTACCTCTTCTTTTGTGGATGTTACGACGTC
GCCTTTGGGAAAAATCACTATTTCTTGTACCTCTTCATTCAAGCATTCGCCTTCTTCATC
ATCGGATTTGGTCATATTGGTACTTTTGTTCCCAACTCTTAA