Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072608
CDS Infomation

pacid=37480406 polypeptide=PGSC0003DMP400049114 locus=PGSC0003DMG402028252 ID=PGSC0003DMT400072608.v4.03 annot-version=v4.03
Sequence

ATGGAGATTTTAAGAAAATCTTCTTCTCTTTGGGCTTTGCCAATTCTTTTGTTGTGCTTC
TTTATCAACAATGGAGTATTTGTTGATGCTTCTCACAAAGTTTATATGCACTTGCAATCT
ACTACTAGCCATGTTGATGCTAGCAAGGTCCATAGAACTGGTTATCATTTTCAACCTCCT
AAAAACTGGATTAACGATCCAAATGGCCCAATGTATTACAATGGAGTGTATCATTTATTC
TACCAGTACAACCCAAAGGGCGCAATATGGGGCAACATTGTTTGGGCCCATTCGGTCTCA
AAGGACTTGATCAATTGGATCCCACTTGAACCCGCTATCTACCCGTCCAAAGTATTTGAC
AAGTATGGTACATGGTCCGGGTCAGCCACAATCTTGCCAGGCAACAAGCCTGTTATTCTC
TACACTGGAATTGTGGATGCTAACAAGACACAAGTCCAAAATTATGCAATCCCGGCTAAC
ATGTCTGATCCATATCTTCGTAAGTGGATCAAGCCCGATAACAATCCATTGATTGTTGCT
GACAAAACCATCAACAAAAGCCAATTTCGTGATCCAACAACCGCTTGGATGGGCCGAGAT
GGAAATTGGAGAATCTTGGTAGGGAGTGTGAGGAATCATAGGGGAAAGGTTATAATGTAC
AAAAGTGATAAGGACTTCATGAAATGGACCAAAGCCAAACACCCACTCCACTCAGCCCCG
GGTACTGGAAATTGGGAATGTCCTGATTTTTTTCCAGTGTCATTGAAAAATAAAAATGGT
TTGGACACGTCATACAATGGCAAAGACATTAAACATGTTCTTAAGGTTAGCTTTGATGTT
ACTAGGTTTGATCATTACACAATTGGTACATATGACACCAAAAAGGATAAATACTTTCCG
GATAACACTTCTATTGATGGATGGAAAGGATTGAGACTTGACTATGGTAACTATTACGCG
TCCAAGACATTCTTTGATAATGGCAAGAATCGTAGGATTTTGTTGGGTTGGGCTAATGAA
TCAGATACTGTTGATAACGATGTGAGGAAAGGATGGGCCGGAGTTCACCCTATTCCTCGT
AAAATTTGGCTTGATCCTAGTGGAAAACAATTGGTTCAATGGCCTGTTCAAGAATTAGAA
ACTCTAAGAAAGAAAAAGGTCCAATTAAATAACAAAAAGTTGAACAAGGGAGAAAAGGTT
GAAATCAAAGGAATCACAGTTGCACAGGCTGATGTTGAAGTGATTTTCTCATTCACAAGT
TTGGATAAGGCAGAGCCATTTGATCCTAGTTGGGCTGATCTTTACGCGCAAGATGTATGC
GCCATTAAAGGTTCAATGGTCCAAGGTGGACTTGGGCCTTTTGGGCTCCTAACTTTGGCT
TCTAAAAACTTAGAAGAATACACACCCGTTTTCTTCAGAATTTTCAAGACTCATGATAAA
TACAAGGTTCTTATGTGTTCCGATGCCTCAAGGTCAAGCCTAAAGAATGAAACAACTATG
TATAAACCATCATTTGCTGGATATGTAGATGTAGATTTAGCGGACAAGAAATTGTCTCTT
AGAAGTTTGATTGATCATTCGGTAGTGGAAAGTTTTGGTGCTGGAGGAAAAACATGCATT
ACATCAAGGGTTTATCCAACGTTGGCGATATTTGACAAAGCACATTTATTTGCATTCAAC
AATGGCGCGGAGAGAATCACAATTGAGACTCTAAATGCTTGGAGCATGGCTAATGCAAAG
TTGCACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049114
PEP Infomation

pacid=37480406 transcript=PGSC0003DMT400072608 locus=PGSC0003DMG402028252 ID=PGSC0003DMT400072608.v4.03 annot-version=v4.03
Sequence

MEILRKSSSLWALPILLLCFFINNGVFVDASHKVYMHLQSTTSHVDASKVHRTGYHFQPP
KNWINDPNGPMYYNGVYHLFYQYNPKGAIWGNIVWAHSVSKDLINWIPLEPAIYPSKVFD
KYGTWSGSATILPGNKPVILYTGIVDANKTQVQNYAIPANMSDPYLRKWIKPDNNPLIVA
DKTINKSQFRDPTTAWMGRDGNWRILVGSVRNHRGKVIMYKSDKDFMKWTKAKHPLHSAP
GTGNWECPDFFPVSLKNKNGLDTSYNGKDIKHVLKVSFDVTRFDHYTIGTYDTKKDKYFP
DNTSIDGWKGLRLDYGNYYASKTFFDNGKNRRILLGWANESDTVDNDVRKGWAGVHPIPR
KIWLDPSGKQLVQWPVQELETLRKKKVQLNNKKLNKGEKVEIKGITVAQADVEVIFSFTS
LDKAEPFDPSWADLYAQDVCAIKGSMVQGGLGPFGLLTLASKNLEEYTPVFFRIFKTHDK
YKVLMCSDASRSSLKNETTMYKPSFAGYVDVDLADKKLSLRSLIDHSVVESFGAGGKTCI
TSRVYPTLAIFDKAHLFAFNNGAERITIETLNAWSMANAKLH*

Transcript Sequence

Transcript ID

PGSC0003DMT400072608
Transcript Infomation

pacid=37480406 locus=PGSC0003DMG402028252 ID=PGSC0003DMT400072608.v4.03 annot-version=v4.03
Sequence

ATGGAGATTTTAAGAAAATCTTCTTCTCTTTGGGCTTTGCCAATTCTTTTGTTGTGCTTC
TTTATCAACAATGGAGTATTTGTTGATGCTTCTCACAAAGTTTATATGCACTTGCAATCT
ACTACTAGCCATGTTGATGCTAGCAAGGTCCATAGAACTGGTTATCATTTTCAACCTCCT
AAAAACTGGATTAACGATCCAAATGGCCCAATGTATTACAATGGAGTGTATCATTTATTC
TACCAGTACAACCCAAAGGGCGCAATATGGGGCAACATTGTTTGGGCCCATTCGGTCTCA
AAGGACTTGATCAATTGGATCCCACTTGAACCCGCTATCTACCCGTCCAAAGTATTTGAC
AAGTATGGTACATGGTCCGGGTCAGCCACAATCTTGCCAGGCAACAAGCCTGTTATTCTC
TACACTGGAATTGTGGATGCTAACAAGACACAAGTCCAAAATTATGCAATCCCGGCTAAC
ATGTCTGATCCATATCTTCGTAAGTGGATCAAGCCCGATAACAATCCATTGATTGTTGCT
GACAAAACCATCAACAAAAGCCAATTTCGTGATCCAACAACCGCTTGGATGGGCCGAGAT
GGAAATTGGAGAATCTTGGTAGGGAGTGTGAGGAATCATAGGGGAAAGGTTATAATGTAC
AAAAGTGATAAGGACTTCATGAAATGGACCAAAGCCAAACACCCACTCCACTCAGCCCCG
GGTACTGGAAATTGGGAATGTCCTGATTTTTTTCCAGTGTCATTGAAAAATAAAAATGGT
TTGGACACGTCATACAATGGCAAAGACATTAAACATGTTCTTAAGGTTAGCTTTGATGTT
ACTAGGTTTGATCATTACACAATTGGTACATATGACACCAAAAAGGATAAATACTTTCCG
GATAACACTTCTATTGATGGATGGAAAGGATTGAGACTTGACTATGGTAACTATTACGCG
TCCAAGACATTCTTTGATAATGGCAAGAATCGTAGGATTTTGTTGGGTTGGGCTAATGAA
TCAGATACTGTTGATAACGATGTGAGGAAAGGATGGGCCGGAGTTCACCCTATTCCTCGT
AAAATTTGGCTTGATCCTAGTGGAAAACAATTGGTTCAATGGCCTGTTCAAGAATTAGAA
ACTCTAAGAAAGAAAAAGGTCCAATTAAATAACAAAAAGTTGAACAAGGGAGAAAAGGTT
GAAATCAAAGGAATCACAGTTGCACAGGCTGATGTTGAAGTGATTTTCTCATTCACAAGT
TTGGATAAGGCAGAGCCATTTGATCCTAGTTGGGCTGATCTTTACGCGCAAGATGTATGC
GCCATTAAAGGTTCAATGGTCCAAGGTGGACTTGGGCCTTTTGGGCTCCTAACTTTGGCT
TCTAAAAACTTAGAAGAATACACACCCGTTTTCTTCAGAATTTTCAAGACTCATGATAAA
TACAAGGTTCTTATGTGTTCCGATGCCTCAAGGTCAAGCCTAAAGAATGAAACAACTATG
TATAAACCATCATTTGCTGGATATGTAGATGTAGATTTAGCGGACAAGAAATTGTCTCTT
AGAAGTTTGATTGATCATTCGGTAGTGGAAAGTTTTGGTGCTGGAGGAAAAACATGCATT
ACATCAAGGGTTTATCCAACGTTGGCGATATTTGACAAAGCACATTTATTTGCATTCAAC
AATGGCGCGGAGAGAATCACAATTGAGACTCTAAATGCTTGGAGCATGGCTAATGCAAAG
TTGCACTAG