Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072592
CDS Infomation

pacid=37476547 polypeptide=PGSC0003DMP400049104 locus=PGSC0003DMG400028246 ID=PGSC0003DMT400072592.v4.03 annot-version=v4.03
Sequence

ATGGATCGACAAACTCCTGATTATGCAGCTGCTATGGCGTTTGCTCAACAGCAGCACCAA
GCAGCTAACACTCAACAGCAACAACAATTTGGTTTTCATCCCCAACATCAACAATTTCCT
CCTTCAATTCATGGTCCTCCATTTCTAGGCCCGCATTCTTCTCTTCAACAGTTCCCTTAC
CCTCGCCCTATGCAGCAACCACAACTCCATCCGCATACACCCCCTCCACATCTTCTTCAT
CTTCAACAGCAACAACAACCACCTCCTGCTTTTCCACCACACATGCCTCCTCACCTTGTT
TCATCACCTTTTTTCAATCCGTATGATTCTCCCCCACCTCCGTCTCCTCCACCATCTGAT
CCTGAACTCCAAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAG
TTTGAAGCCATGATCCGTGAAAAGCAGCAAGACAATCCTGCTTACAGTTTCCTCTTTGGT
GGTGAAGGTCATTATTACTATCGCTATAAGCTTTGGATGTCTACTCGCCCCCCTGGTGGG
GCCTTCAATCCTCCTTTCCCATCCTCTTCTTTGCCTATGATGCATCCACCAAATCCTATG
ATGAGTCCGTCACCCTTAACTCCATATAATGCCTCCAATGCTTCTGCTGCAATGTTAGGT
CCATCCCATTTGCATCGACCCCCTTTCCCACCCTTTTATGATCAACATCATTCTCAGCCT
TTTAGCCGAGCAGATTATGAACATTCATATGGGCCTTTCAAAGGTCTATCTAGGCCTCTT
CCATCAGATGTAGAGATGGAGCTTAGTAATGTCATAAATAATCTTACTGGTACGAAAGAG
TCAATTAAAGGTGCCAAGAGTTGGTTTATGCAGAGATCTCCATTTGTACCTGCTTTGGCT
GAGGCGCTCAGAGACAGGGTGTTTTCCATAGATGATTCGGAGAGGCAACTGCATATAGTC
TATCTTGCCAATGACATCTTATTTGATAGCTTGCAGCGACGAATCAATCCTCCTGAGCTT
GACAATGAGGCACTTGCTTTTAAGCCTGTTTTGGGTCCCATGCTTGCGAGGATATACCAC
AACCCTCAAAACAAGGAAGAAAATCAATCTCGGCTTCAAAAAATTCTACAGTTTTGGGGT
ACGAAGGAAGTTTATGATCAGGATACTATTCGTGCACTTGAAAATGAGATGATAGGTGGA
CACCCTGCAAATTTTTCTGTTCCTCCAAAGGAATTAATCACACCAGATACTTCTGCTGCT
GCAGGATTAATGCACCAGGCGGCAAATCAGAGTACTTTTCAGTGGAAGCCTGACCAGCAA
AGTTTAGCAAATCTAGCTGATCAAGGCAAACAAGTTCCTATTATACCATCTGTTGCACCA
CAGCAGTTTCATGCGGGTGCTGTTCCGCCTACTGGATTTCCTGGGTTAATGCCTATACCA
TCTTCTGTTCCACCAGCAAATCTACAACCGGCAGCTCATCTGACACCAGCAAATATAGGT
GAAAAAGTACCTCCATACCCCTTGTTCCCTCCTGGTCTTATTCCTGGTATGGTCAGGAAG
ATGCAGATTGGTAGTGGGGTGCCTTACTCTCCCATGAGCCCCTTGGATATTCCCACCGTC
ATACCACCCTCGACTGTGTCAGAATCTGAAATTCTTGAAAGGGTGTCTAAATTTTTTAGA
GATATTGGAGAAGTTAATCCATCAGAAGGACCTATTAAACAATCTGAATCAGCCAACGAT
TATGATGACTATGAGAGAGACTCTCCTGTCCGGAAGGGAGGAGCTTGCATTCCTCCACCT
CTAAACCTTCAAGTTGATCCGGAAACTGGGACTTATCCTGATGGAAGTATTCCGCAGAAA
CCTGGATCGAATAGCTCTGGACGATTAGGACTTGGAGCCACAGCCAATCCAAACGAACCA
AATCAATATGATGATGTTTACACTTCTTACAGGAAAGATAGAAGCACCAATTATCATACA
TCAATGAGTGCAAGAACTGCTACGAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049104
PEP Infomation

pacid=37476547 transcript=PGSC0003DMT400072592 locus=PGSC0003DMG400028246 ID=PGSC0003DMT400072592.v4.03 annot-version=v4.03
Sequence

MDRQTPDYAAAMAFAQQQHQAANTQQQQQFGFHPQHQQFPPSIHGPPFLGPHSSLQQFPY
PRPMQQPQLHPHTPPPHLLHLQQQQQPPPAFPPHMPPHLVSSPFFNPYDSPPPPSPPPSD
PELQKRIDKLIEYAVKNGPEFEAMIREKQQDNPAYSFLFGGEGHYYYRYKLWMSTRPPGG
AFNPPFPSSSLPMMHPPNPMMSPSPLTPYNASNASAAMLGPSHLHRPPFPPFYDQHHSQP
FSRADYEHSYGPFKGLSRPLPSDVEMELSNVINNLTGTKESIKGAKSWFMQRSPFVPALA
EALRDRVFSIDDSERQLHIVYLANDILFDSLQRRINPPELDNEALAFKPVLGPMLARIYH
NPQNKEENQSRLQKILQFWGTKEVYDQDTIRALENEMIGGHPANFSVPPKELITPDTSAA
AGLMHQAANQSTFQWKPDQQSLANLADQGKQVPIIPSVAPQQFHAGAVPPTGFPGLMPIP
SSVPPANLQPAAHLTPANIGEKVPPYPLFPPGLIPGMVRKMQIGSGVPYSPMSPLDIPTV
IPPSTVSESEILERVSKFFRDIGEVNPSEGPIKQSESANDYDDYERDSPVRKGGACIPPP
LNLQVDPETGTYPDGSIPQKPGSNSSGRLGLGATANPNEPNQYDDVYTSYRKDRSTNYHT
SMSARTATR*

Transcript Sequence

Transcript ID

PGSC0003DMT400072592
Transcript Infomation

pacid=37476547 locus=PGSC0003DMG400028246 ID=PGSC0003DMT400072592.v4.03 annot-version=v4.03
Sequence

ATGGATCGACAAACTCCTGATTATGCAGCTGCTATGGCGTTTGCTCAACAGCAGCACCAA
GCAGCTAACACTCAACAGCAACAACAATTTGGTTTTCATCCCCAACATCAACAATTTCCT
CCTTCAATTCATGGTCCTCCATTTCTAGGCCCGCATTCTTCTCTTCAACAGTTCCCTTAC
CCTCGCCCTATGCAGCAACCACAACTCCATCCGCATACACCCCCTCCACATCTTCTTCAT
CTTCAACAGCAACAACAACCACCTCCTGCTTTTCCACCACACATGCCTCCTCACCTTGTT
TCATCACCTTTTTTCAATCCGTATGATTCTCCCCCACCTCCGTCTCCTCCACCATCTGAT
CCTGAACTCCAAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAG
TTTGAAGCCATGATCCGTGAAAAGCAGCAAGACAATCCTGCTTACAGTTTCCTCTTTGGT
GGTGAAGGTCATTATTACTATCGCTATAAGCTTTGGATGTCTACTCGCCCCCCTGGTGGG
GCCTTCAATCCTCCTTTCCCATCCTCTTCTTTGCCTATGATGCATCCACCAAATCCTATG
ATGAGTCCGTCACCCTTAACTCCATATAATGCCTCCAATGCTTCTGCTGCAATGTTAGGT
CCATCCCATTTGCATCGACCCCCTTTCCCACCCTTTTATGATCAACATCATTCTCAGCCT
TTTAGCCGAGCAGATTATGAACATTCATATGGGCCTTTCAAAGGTCTATCTAGGCCTCTT
CCATCAGATGTAGAGATGGAGCTTAGTAATGTCATAAATAATCTTACTGGTACGAAAGAG
TCAATTAAAGGTGCCAAGAGTTGGTTTATGCAGAGATCTCCATTTGTACCTGCTTTGGCT
GAGGCGCTCAGAGACAGGGTGTTTTCCATAGATGATTCGGAGAGGCAACTGCATATAGTC
TATCTTGCCAATGACATCTTATTTGATAGCTTGCAGCGACGAATCAATCCTCCTGAGCTT
GACAATGAGGCACTTGCTTTTAAGCCTGTTTTGGGTCCCATGCTTGCGAGGATATACCAC
AACCCTCAAAACAAGGAAGAAAATCAATCTCGGCTTCAAAAAATTCTACAGTTTTGGGGT
ACGAAGGAAGTTTATGATCAGGATACTATTCGTGCACTTGAAAATGAGATGATAGGTGGA
CACCCTGCAAATTTTTCTGTTCCTCCAAAGGAATTAATCACACCAGATACTTCTGCTGCT
GCAGGATTAATGCACCAGGCGGCAAATCAGAGTACTTTTCAGTGGAAGCCTGACCAGCAA
AGTTTAGCAAATCTAGCTGATCAAGGCAAACAAGTTCCTATTATACCATCTGTTGCACCA
CAGCAGTTTCATGCGGGTGCTGTTCCGCCTACTGGATTTCCTGGGTTAATGCCTATACCA
TCTTCTGTTCCACCAGCAAATCTACAACCGGCAGCTCATCTGACACCAGCAAATATAGGT
GAAAAAGTACCTCCATACCCCTTGTTCCCTCCTGGTCTTATTCCTGGTATGGTCAGGAAG
ATGCAGATTGGTAGTGGGGTGCCTTACTCTCCCATGAGCCCCTTGGATATTCCCACCGTC
ATACCACCCTCGACTGTGTCAGAATCTGAAATTCTTGAAAGGGTGTCTAAATTTTTTAGA
GATATTGGAGAAGTTAATCCATCAGAAGGACCTATTAAACAATCTGAATCAGCCAACGAT
TATGATGACTATGAGAGAGACTCTCCTGTCCGGAAGGGAGGAGCTTGCATTCCTCCACCT
CTAAACCTTCAAGTTGATCCGGAAACTGGGACTTATCCTGATGGAAGTATTCCGCAGAAA
CCTGGATCGAATAGCTCTGGACGATTAGGACTTGGAGCCACAGCCAATCCAAACGAACCA
AATCAATATGATGATGTTTACACTTCTTACAGGAAAGATAGAAGCACCAATTATCATACA
TCAATGAGTGCAAGAACTGCTACGAGGTGA