Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072587
CDS Infomation

pacid=37477380 polypeptide=PGSC0003DMP400049100 locus=PGSC0003DMG400028245 ID=PGSC0003DMT400072587.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCTTCATTCCTTTCAACAATCGGCAAAAGGCTAGAGGGGAAAGTAGCAATT
GTAACCGGAGGAGCTAGTGGTATCGGTGAAGCAATTGCAAAGCTCTTCTCTGAACATGGA
GCCAAAGTGGTCATTGCCGATGTCCAAGATGAACTCGGCAACTCAGTCATCAACGCCCTC
GGAGGCTCATCCAACTCCATTTACATCCACTGCGATGTCACAAACGAAGACCACGTCCAA
GAAGCTGTCGACAGAACCATCGCCACATTTGGAAAACTCGACATCATGATCTGCAATGCT
GGCATATGCGACGAGACCAAGTCAAGAATCATAGACAACACGAAAGCAGATTTCGAACGA
GTCCTTAGCATCAACGTGACAGGAGTTTTCTTGAGCATGAAGCATGCCGCTCGCGTCATG
GTCCCTACACGTAGCGGCTGCATCATCTCCACCGCTAGTGTAAGCTCCACGGTCGGAGCT
GCAGCATCCCATGCATACTGCAGCTCCAAACACGCCGTGTTGGGGCTCACCAAGAACCTA
GCGGTGGAGCTAGGACAATTCGGTATACGTGTGAATTGCTTGTCACCATATGCGATGGTC
ACGCCATTGGCGACAAAGGTCATTGGGCTTGAAAATGAAGAGCTTGAGAATGCGATGAGC
GCGGTTGGGAACCTTAAAGGAGCTACTCTGAAGGTGGATGATGTTGCAAAAGCAGCATTG
TTCTTAGCAAGTGATGATGCCCAGTATATCAGTGGACACAATCTTTTCATTGATGGGGGA
TTCACTGTGTGTAATCCAGGACTAGGCATGTTCAAGTATCCAGAATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049100
PEP Infomation

pacid=37477380 transcript=PGSC0003DMT400072587 locus=PGSC0003DMG400028245 ID=PGSC0003DMT400072587.v4.03 annot-version=v4.03
Sequence

MASASFLSTIGKRLEGKVAIVTGGASGIGEAIAKLFSEHGAKVVIADVQDELGNSVINAL
GGSSNSIYIHCDVTNEDHVQEAVDRTIATFGKLDIMICNAGICDETKSRIIDNTKADFER
VLSINVTGVFLSMKHAARVMVPTRSGCIISTASVSSTVGAAASHAYCSSKHAVLGLTKNL
AVELGQFGIRVNCLSPYAMVTPLATKVIGLENEELENAMSAVGNLKGATLKVDDVAKAAL
FLASDDAQYISGHNLFIDGGFTVCNPGLGMFKYPES*

Transcript Sequence

Transcript ID

PGSC0003DMT400072587
Transcript Infomation

pacid=37477380 locus=PGSC0003DMG400028245 ID=PGSC0003DMT400072587.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGCTTCATTCCTTTCAACAATCGGCAAAAGGCTAGAGGGGAAAGTAGCAATT
GTAACCGGAGGAGCTAGTGGTATCGGTGAAGCAATTGCAAAGCTCTTCTCTGAACATGGA
GCCAAAGTGGTCATTGCCGATGTCCAAGATGAACTCGGCAACTCAGTCATCAACGCCCTC
GGAGGCTCATCCAACTCCATTTACATCCACTGCGATGTCACAAACGAAGACCACGTCCAA
GAAGCTGTCGACAGAACCATCGCCACATTTGGAAAACTCGACATCATGATCTGCAATGCT
GGCATATGCGACGAGACCAAGTCAAGAATCATAGACAACACGAAAGCAGATTTCGAACGA
GTCCTTAGCATCAACGTGACAGGAGTTTTCTTGAGCATGAAGCATGCCGCTCGCGTCATG
GTCCCTACACGTAGCGGCTGCATCATCTCCACCGCTAGTGTAAGCTCCACGGTCGGAGCT
GCAGCATCCCATGCATACTGCAGCTCCAAACACGCCGTGTTGGGGCTCACCAAGAACCTA
GCGGTGGAGCTAGGACAATTCGGTATACGTGTGAATTGCTTGTCACCATATGCGATGGTC
ACGCCATTGGCGACAAAGGTCATTGGGCTTGAAAATGAAGAGCTTGAGAATGCGATGAGC
GCGGTTGGGAACCTTAAAGGAGCTACTCTGAAGGTGGATGATGTTGCAAAAGCAGCATTG
TTCTTAGCAAGTGATGATGCCCAGTATATCAGTGGACACAATCTTTTCATTGATGGGGGA
TTCACTGTGTGTAATCCAGGACTAGGCATGTTCAAGTATCCAGAATCCTAA