Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072563
CDS Infomation

pacid=37476633 polypeptide=PGSC0003DMP400049080 locus=PGSC0003DMG400028233 ID=PGSC0003DMT400072563.v4.03 annot-version=v4.03
Sequence

ATGATCAATTTCAGGCCACCGGAGACGAGAACGAGGCCGTCTGTAGGTTCGAGTTCGAGC
TCCGTTGTGACGGCGGAGAAAGCGTTGTCGTTTATATCGAAGGGATGGCAAGAGGTACGA
TCTTCAGCGGACGCGGATCTTCAGCTTATAAAAAACCGAGCGAATAAGTTTAAGAACTTA
GCGGATAGAGAGCTGGAGAATTTCATCAATTCAGCTTCGATATCGCCTTTCGCTGTTCCA
GCAATTACGGCTTCTACCATTACGGCACCGGCGGAGATTGATTTTGTGAAGAAGCTTCGT
CCGAAGCTTTCTGAGATACGTAGGGCGTATTCGTCGTCGGAGTTTAAGTGGCCGTCGCAG
GGGAAGCTTAGGATTGATTTATCAGCGATTAAGAATGCAATTGTAGCGGAAGTGGAAGAG
GAGGAGGAGGAGGAGAAGGAGAGGGAGAGGGAGAGGGAGATATGGAGGAAGTGGAGGTGT
GACAGGCTTAAGGAAGAGAGACATTTTGGGGAATTTGATTGGGAGCCTATTAGAACTTTC
AAAACTCGGTTAAAGGAGCTGGAGGTGGAGCTTAAGGGATCGAGATCGTCCCCGGCAGAG
ATTTTTGAAGTGATTAAGAATAGTGAATTTGTGGGGAAAGTAAAATCAAGCTTGAAATCA
ATTTGCAAGGAACCAGAAGAGACAAAGGGAGTGCCACCACTTGATGTGCCAGAACTATTG
GCATATTTAGTTAGACAATCGAGCCCATTTTTGGATCAAATTGGAATAAGAAGAGATATA
TCGGAGAAGATTGTAGAAAGTTTATGCAGCAAAGGACACAGCAAGCTTTTGCTAAATTCC
TTACCTGGAGGGGGGTCCTCGCTGATTGATGGTGAAATTATGAATGATGAATTAGATTTA
AGAATCGCCAGTGTTCTTCAGAGTACTGGTCATTGTTATGATGGTGGATTTTGGGGAGAT
TCTACCAAGCAGAATCTAGAAGGCGATAAGAGACATGTAGCAATAGTTACAACTGCTAGC
CTTCCTTGGATGACAGGAACTGCTGTAAATCCTCTATTCCGAGCGGCTTACTTAGCCAAA
TCAGAAAAGCAGAATGTTACGTTGCTGGTTCCATGGCTATGTAAGTCTGACCAAGAGCTG
GTTTATCCAAACCAACTTACTTTTAGTTCTCCTGAAGCTCAAGAGCTTTATATACGCAAT
TGGCTCGAGGAGAGAATTGGTTTCAAGGCTGACTTCAAGATTTCATTTTACCCTGGAAAG
TTCTCCAAAGAAAGGCGGAGCATATTACCAGCTGGAGACACTTCTCAGTTTATCCCATCT
AGGGATGCCGATATTGCAATTTTGGAGGAGCCAGAACATCTCAATTGGTACCACCATGGA
AAACGTTGGACCAATAAATTCAACCATGTTGTTGGTATCGTCCACACAAACTATTTGGAA
TATATCAAGAGGGAAAAGAATGGGGCTCTTCAAGCTTTTTTTGTGAAACACATTAACAAT
TGGGTCACGAGAGCATATTGTGACAAGGTTCTTCGCCTTTCTGCTGCTACACAAGATTTG
CCCAGGTCTTTGGTCTGCAATGTTCATGGTGTCAATCCAAAGTTTCTGAAAATAGGAGAA
AAAGCAGCTGCAGATAGACAAAGCGGCCAGAAAGTTTTCTCTAAAGGGGCATATTTCCTT
GGCAAAATGGTTTGGGCGAAGGGATACCGGGAGTTGATAGATCTCTTATCAAAGCACAAA
ACTGAATTTGATGGCTTTAATTTGGATGTATTCGGCAATGGGGAAGATGCTCATGAAGTA
CAGAGTACGGCAAAGAGGTTAAATCTCAATGTCAACTTCATGAATGGTAGAGACCATGCA
GATGATTCTCTTCATGGTTACAAAGTCTTCATAAATCCTAGTATCAGTGATGTGCTCTGT
ACTGCCACAGCTGAGGCTCTTGCAATGGGGAAATTTGTAGTATGTGCAGATCACCCATCT
AATGAATTTTTCCAGGAATTTCCCAACTGTTTGACTTACAAGACACCTGAAGACTTTGTT
GCAAAAGTTGAAAAGGCAATGTCTAGCGAACCTCAACCTCTCACACCCGAGGAGCAATAC
AAGCTTTCATGGGAAGCTGCTACCCAGAGGTTCATGAAATATTCTGACCTCGAAAAGGTT
TTGAGTGATGAAACAAGTCTGGACAGGAGACGTCGGAAAGGCATGGGTAAATCAGTTTCC
ATGCCAAACCTAGAAGAGATGGTTGATGGGGCTCTGGCATTTACACACAATTGTCTCACA
GGGAATGAGTTCTTGAGGTCGTGTACTGGTGCAATACCCAGAACTCGGGATTATGACAAA
CAGCATTGCAATGATCTCCATCTCTTGCCTCCTCAGGTAGAAAACCCAATATATGGCTGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400049080
PEP Infomation

pacid=37476633 transcript=PGSC0003DMT400072563 locus=PGSC0003DMG400028233 ID=PGSC0003DMT400072563.v4.03 annot-version=v4.03
Sequence

MINFRPPETRTRPSVGSSSSSVVTAEKALSFISKGWQEVRSSADADLQLIKNRANKFKNL
ADRELENFINSASISPFAVPAITASTITAPAEIDFVKKLRPKLSEIRRAYSSSEFKWPSQ
GKLRIDLSAIKNAIVAEVEEEEEEEKEREREREIWRKWRCDRLKEERHFGEFDWEPIRTF
KTRLKELEVELKGSRSSPAEIFEVIKNSEFVGKVKSSLKSICKEPEETKGVPPLDVPELL
AYLVRQSSPFLDQIGIRRDISEKIVESLCSKGHSKLLLNSLPGGGSSLIDGEIMNDELDL
RIASVLQSTGHCYDGGFWGDSTKQNLEGDKRHVAIVTTASLPWMTGTAVNPLFRAAYLAK
SEKQNVTLLVPWLCKSDQELVYPNQLTFSSPEAQELYIRNWLEERIGFKADFKISFYPGK
FSKERRSILPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTNKFNHVVGIVHTNYLE
YIKREKNGALQAFFVKHINNWVTRAYCDKVLRLSAATQDLPRSLVCNVHGVNPKFLKIGE
KAAADRQSGQKVFSKGAYFLGKMVWAKGYRELIDLLSKHKTEFDGFNLDVFGNGEDAHEV
QSTAKRLNLNVNFMNGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPS
NEFFQEFPNCLTYKTPEDFVAKVEKAMSSEPQPLTPEEQYKLSWEAATQRFMKYSDLEKV
LSDETSLDRRRRKGMGKSVSMPNLEEMVDGALAFTHNCLTGNEFLRSCTGAIPRTRDYDK
QHCNDLHLLPPQVENPIYGW*

Transcript Sequence

Transcript ID

PGSC0003DMT400072563
Transcript Infomation

pacid=37476633 locus=PGSC0003DMG400028233 ID=PGSC0003DMT400072563.v4.03 annot-version=v4.03
Sequence

ATGATCAATTTCAGGCCACCGGAGACGAGAACGAGGCCGTCTGTAGGTTCGAGTTCGAGC
TCCGTTGTGACGGCGGAGAAAGCGTTGTCGTTTATATCGAAGGGATGGCAAGAGGTACGA
TCTTCAGCGGACGCGGATCTTCAGCTTATAAAAAACCGAGCGAATAAGTTTAAGAACTTA
GCGGATAGAGAGCTGGAGAATTTCATCAATTCAGCTTCGATATCGCCTTTCGCTGTTCCA
GCAATTACGGCTTCTACCATTACGGCACCGGCGGAGATTGATTTTGTGAAGAAGCTTCGT
CCGAAGCTTTCTGAGATACGTAGGGCGTATTCGTCGTCGGAGTTTAAGTGGCCGTCGCAG
GGGAAGCTTAGGATTGATTTATCAGCGATTAAGAATGCAATTGTAGCGGAAGTGGAAGAG
GAGGAGGAGGAGGAGAAGGAGAGGGAGAGGGAGAGGGAGATATGGAGGAAGTGGAGGTGT
GACAGGCTTAAGGAAGAGAGACATTTTGGGGAATTTGATTGGGAGCCTATTAGAACTTTC
AAAACTCGGTTAAAGGAGCTGGAGGTGGAGCTTAAGGGATCGAGATCGTCCCCGGCAGAG
ATTTTTGAAGTGATTAAGAATAGTGAATTTGTGGGGAAAGTAAAATCAAGCTTGAAATCA
ATTTGCAAGGAACCAGAAGAGACAAAGGGAGTGCCACCACTTGATGTGCCAGAACTATTG
GCATATTTAGTTAGACAATCGAGCCCATTTTTGGATCAAATTGGAATAAGAAGAGATATA
TCGGAGAAGATTGTAGAAAGTTTATGCAGCAAAGGACACAGCAAGCTTTTGCTAAATTCC
TTACCTGGAGGGGGGTCCTCGCTGATTGATGGTGAAATTATGAATGATGAATTAGATTTA
AGAATCGCCAGTGTTCTTCAGAGTACTGGTCATTGTTATGATGGTGGATTTTGGGGAGAT
TCTACCAAGCAGAATCTAGAAGGCGATAAGAGACATGTAGCAATAGTTACAACTGCTAGC
CTTCCTTGGATGACAGGAACTGCTGTAAATCCTCTATTCCGAGCGGCTTACTTAGCCAAA
TCAGAAAAGCAGAATGTTACGTTGCTGGTTCCATGGCTATGTAAGTCTGACCAAGAGCTG
GTTTATCCAAACCAACTTACTTTTAGTTCTCCTGAAGCTCAAGAGCTTTATATACGCAAT
TGGCTCGAGGAGAGAATTGGTTTCAAGGCTGACTTCAAGATTTCATTTTACCCTGGAAAG
TTCTCCAAAGAAAGGCGGAGCATATTACCAGCTGGAGACACTTCTCAGTTTATCCCATCT
AGGGATGCCGATATTGCAATTTTGGAGGAGCCAGAACATCTCAATTGGTACCACCATGGA
AAACGTTGGACCAATAAATTCAACCATGTTGTTGGTATCGTCCACACAAACTATTTGGAA
TATATCAAGAGGGAAAAGAATGGGGCTCTTCAAGCTTTTTTTGTGAAACACATTAACAAT
TGGGTCACGAGAGCATATTGTGACAAGGTTCTTCGCCTTTCTGCTGCTACACAAGATTTG
CCCAGGTCTTTGGTCTGCAATGTTCATGGTGTCAATCCAAAGTTTCTGAAAATAGGAGAA
AAAGCAGCTGCAGATAGACAAAGCGGCCAGAAAGTTTTCTCTAAAGGGGCATATTTCCTT
GGCAAAATGGTTTGGGCGAAGGGATACCGGGAGTTGATAGATCTCTTATCAAAGCACAAA
ACTGAATTTGATGGCTTTAATTTGGATGTATTCGGCAATGGGGAAGATGCTCATGAAGTA
CAGAGTACGGCAAAGAGGTTAAATCTCAATGTCAACTTCATGAATGGTAGAGACCATGCA
GATGATTCTCTTCATGGTTACAAAGTCTTCATAAATCCTAGTATCAGTGATGTGCTCTGT
ACTGCCACAGCTGAGGCTCTTGCAATGGGGAAATTTGTAGTATGTGCAGATCACCCATCT
AATGAATTTTTCCAGGAATTTCCCAACTGTTTGACTTACAAGACACCTGAAGACTTTGTT
GCAAAAGTTGAAAAGGCAATGTCTAGCGAACCTCAACCTCTCACACCCGAGGAGCAATAC
AAGCTTTCATGGGAAGCTGCTACCCAGAGGTTCATGAAATATTCTGACCTCGAAAAGGTT
TTGAGTGATGAAACAAGTCTGGACAGGAGACGTCGGAAAGGCATGGGTAAATCAGTTTCC
ATGCCAAACCTAGAAGAGATGGTTGATGGGGCTCTGGCATTTACACACAATTGTCTCACA
GGGAATGAGTTCTTGAGGTCGTGTACTGGTGCAATACCCAGAACTCGGGATTATGACAAA
CAGCATTGCAATGATCTCCATCTCTTGCCTCCTCAGGTAGAAAACCCAATATATGGCTGG
TAA