Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072557
CDS Infomation

pacid=37479705 polypeptide=PGSC0003DMP400049074 locus=PGSC0003DMG400028231 ID=PGSC0003DMT400072557.v4.03 annot-version=v4.03
Sequence

ATGAAGGACAATGGTAACATCTCTCAGTACAGAAGTAGACTGGATCAGACGCTATCGTCT
GATGATCTTGTCGATTATGATAAGCTTAAGTCCCTTGTCAAGAATCAAATCCTATGCTCA
TCAGAATGTGATCTTCACGAATGTATTGACAATCTAGTAGATAGAAGAACCAAGGAAGTG
GCAAACTTCCTGAGCATGTTGAGGAGTGCATCAGTAACTGATTCCGAGGCATCGCATGAT
GGTTGGAAAGTAAAACAGGACAGTGAGGAGATTCGTGTTATGTATCGAGAGGGACCAGAA
GGCACTCCTTATCATACCCTCTTAGCTGAAGGTTATGTGGATGGTCCAATAGATGTTTGT
TTATGCATTTCATGGGAGGCAGAACTCTACAAGAAGTGGTGGCCACAAACTACAATTCCA
ACTTTTAAAATCGCGACATCTCAATGTTTGCAAAAGGTCAGAACTGGTGAACAGATATGT
TTAGTAAGGATGAAGCTCTCAAGGCCATTGTCAGCAAGGGAAGCTGTGGTACATTTATTT
GCATTTGAATACTTTCAAGATGGCCTTATAGTTGTGGTTGCCAATACTATCTCTGACTTA
GATAGTGTTGATAGAAGTACACATTGTTATTCCAAAGATGAGATACCGGATGTGCAGGAT
GTAGTACGAGTTGATCTTGTGGGAGGTTTTGCTCTACAAAAAGTTACTGATAATCGAAGC
TACTTCAGGACAATAGGAAATTTGGATATTAAACTGGACTTTATACCTCCAGCATTAATA
AATTTCGTGGCAAGGCAGCTCGTAGGTGGCGGTTTCAAGCTTTTTAAGAAGGAAGTAGCT
TCAGTTGCTAAAGGTGATGAAGACTTCAGCAAGGCTCTAAAGGATCCACTGTATGCTCGA
ATACGTGAAGCTCTTTACTCCGATAAAATACCTTTAGAACTTCAAGACATGAAGAAAAAT
GCAGTTCCTCTTGATGAAGAAACTAGAAGAAAGAATGATGAAAAATGTCCTGTGCAAAAG
GTTCATAGTGAAATCGAGGAGATTGAAGACGAAGCCTGTGAAAAGATCGAATATCAAAAT
CAGGATGACAGGAACATACATGATTCTCCAGTCAATCAAATTGTTCAGAAACCGAGCAAG
CATGAGAATGTTGGCATTAGCCCTGAGGTCAGACAAGCTTTAGTAACTTTGGATAAGGCT
ATTTCTATCATAAGGGAATATGGATGTAACCTCGAAATTAGGACAGTTCCAGACACTAAC
ATAATGTCAGTAGAAGGGGAGACATACAGTCTACAAGATTCAAAATCATCAGAAGCTGAT
AAGGATGGTAGAAACGTCGGAGATTTTGGTGTAATACCCAAACAGGAATTTAGAGAAGCA
ACCTCTTATGAACACAGAGATAGCTCTTGTTCCAGGCGCACGAGTTCTAGTTTGTGCACA
AGGGATGCACCCCATAACAAGATTGCTCCAGCATCACCGGATGTTTATGCTGCAATTCCT
GGTGATGAGGCACATCACATCGCTCTATGCTCTTCAACAGATGAAGCAACAACAGGGAAA
ACAATGGAGAAGTTATTGAAGGAGGACAATGTGACGGTTGCCTATGAGGATAGCATCCAT
GAGAAGGAGCTCGGTGAAAGAAAAACTAGAAAAATACCGAGATATTGCTGTTTAAGAGTG
AGCAAATTTATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049074
PEP Infomation

pacid=37479705 transcript=PGSC0003DMT400072557 locus=PGSC0003DMG400028231 ID=PGSC0003DMT400072557.v4.03 annot-version=v4.03
Sequence

MKDNGNISQYRSRLDQTLSSDDLVDYDKLKSLVKNQILCSSECDLHECIDNLVDRRTKEV
ANFLSMLRSASVTDSEASHDGWKVKQDSEEIRVMYREGPEGTPYHTLLAEGYVDGPIDVC
LCISWEAELYKKWWPQTTIPTFKIATSQCLQKVRTGEQICLVRMKLSRPLSAREAVVHLF
AFEYFQDGLIVVVANTISDLDSVDRSTHCYSKDEIPDVQDVVRVDLVGGFALQKVTDNRS
YFRTIGNLDIKLDFIPPALINFVARQLVGGGFKLFKKEVASVAKGDEDFSKALKDPLYAR
IREALYSDKIPLELQDMKKNAVPLDEETRRKNDEKCPVQKVHSEIEEIEDEACEKIEYQN
QDDRNIHDSPVNQIVQKPSKHENVGISPEVRQALVTLDKAISIIREYGCNLEIRTVPDTN
IMSVEGETYSLQDSKSSEADKDGRNVGDFGVIPKQEFREATSYEHRDSSCSRRTSSSLCT
RDAPHNKIAPASPDVYAAIPGDEAHHIALCSSTDEATTGKTMEKLLKEDNVTVAYEDSIH
EKELGERKTRKIPRYCCLRVSKFI*

Transcript Sequence

Transcript ID

PGSC0003DMT400072557
Transcript Infomation

pacid=37479705 locus=PGSC0003DMG400028231 ID=PGSC0003DMT400072557.v4.03 annot-version=v4.03
Sequence

ATGAAGGACAATGGTAACATCTCTCAGTACAGAAGTAGACTGGATCAGACGCTATCGTCT
GATGATCTTGTCGATTATGATAAGCTTAAGTCCCTTGTCAAGAATCAAATCCTATGCTCA
TCAGAATGTGATCTTCACGAATGTATTGACAATCTAGTAGATAGAAGAACCAAGGAAGTG
GCAAACTTCCTGAGCATGTTGAGGAGTGCATCAGTAACTGATTCCGAGGCATCGCATGAT
GGTTGGAAAGTAAAACAGGACAGTGAGGAGATTCGTGTTATGTATCGAGAGGGACCAGAA
GGCACTCCTTATCATACCCTCTTAGCTGAAGGTTATGTGGATGGTCCAATAGATGTTTGT
TTATGCATTTCATGGGAGGCAGAACTCTACAAGAAGTGGTGGCCACAAACTACAATTCCA
ACTTTTAAAATCGCGACATCTCAATGTTTGCAAAAGGTCAGAACTGGTGAACAGATATGT
TTAGTAAGGATGAAGCTCTCAAGGCCATTGTCAGCAAGGGAAGCTGTGGTACATTTATTT
GCATTTGAATACTTTCAAGATGGCCTTATAGTTGTGGTTGCCAATACTATCTCTGACTTA
GATAGTGTTGATAGAAGTACACATTGTTATTCCAAAGATGAGATACCGGATGTGCAGGAT
GTAGTACGAGTTGATCTTGTGGGAGGTTTTGCTCTACAAAAAGTTACTGATAATCGAAGC
TACTTCAGGACAATAGGAAATTTGGATATTAAACTGGACTTTATACCTCCAGCATTAATA
AATTTCGTGGCAAGGCAGCTCGTAGGTGGCGGTTTCAAGCTTTTTAAGAAGGAAGTAGCT
TCAGTTGCTAAAGGTGATGAAGACTTCAGCAAGGCTCTAAAGGATCCACTGTATGCTCGA
ATACGTGAAGCTCTTTACTCCGATAAAATACCTTTAGAACTTCAAGACATGAAGAAAAAT
GCAGTTCCTCTTGATGAAGAAACTAGAAGAAAGAATGATGAAAAATGTCCTGTGCAAAAG
GTTCATAGTGAAATCGAGGAGATTGAAGACGAAGCCTGTGAAAAGATCGAATATCAAAAT
CAGGATGACAGGAACATACATGATTCTCCAGTCAATCAAATTGTTCAGAAACCGAGCAAG
CATGAGAATGTTGGCATTAGCCCTGAGGTCAGACAAGCTTTAGTAACTTTGGATAAGGCT
ATTTCTATCATAAGGGAATATGGATGTAACCTCGAAATTAGGACAGTTCCAGACACTAAC
ATAATGTCAGTAGAAGGGGAGACATACAGTCTACAAGATTCAAAATCATCAGAAGCTGAT
AAGGATGGTAGAAACGTCGGAGATTTTGGTGTAATACCCAAACAGGAATTTAGAGAAGCA
ACCTCTTATGAACACAGAGATAGCTCTTGTTCCAGGCGCACGAGTTCTAGTTTGTGCACA
AGGGATGCACCCCATAACAAGATTGCTCCAGCATCACCGGATGTTTATGCTGCAATTCCT
GGTGATGAGGCACATCACATCGCTCTATGCTCTTCAACAGATGAAGCAACAACAGGGAAA
ACAATGGAGAAGTTATTGAAGGAGGACAATGTGACGGTTGCCTATGAGGATAGCATCCAT
GAGAAGGAGCTCGGTGAAAGAAAAACTAGAAAAATACCGAGATATTGCTGTTTAAGAGTG
AGCAAATTTATTTAA