Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072554
CDS Infomation

pacid=37476750 polypeptide=PGSC0003DMP400049071 locus=PGSC0003DMG400028229 ID=PGSC0003DMT400072554.v4.03 annot-version=v4.03
Sequence

ATGGGAAATAATTGTGTTCATTCTAAGTTTACAAAGGGTGGGTTCTTCAACTTATTCTTT
TGGCGATCTCGATCACCGGATATGATTACTAATAAGAAAAAACCAAAGGGTATAGAACAT
TCTACAGACAAACAACCTGAACGTGAGAACTCCATTCAGAATAAACCCCCAGAAATGGTG
ATGATAGACAGGGAAAAGCCCGATCAGGAACACAAGAAAGACACTCAGGTAGTTAAACAG
GAGAAGATATCAGTTGATTTGAAACCGAATGAAGCAATACAACCTGAAAAGTCTGACAAT
ACAATCCATCAAAAGGCGAAACCAAAAGAGTCTGCAAAACCGAAGAAGCCACATGTCAAG
AGAATGCTTAGTGCAGGACTCCAGGTTGAGTCTGTGTTGAAAACAAAAACTGGTCTTCTG
AAGGAGCATTATGATTTGGGAGATAAACTTGGACATGGCCAATTTGGGACAACATTTCTT
TGCGTTGAAAAAGCAACAGGGGAAAAGTATGCATGTAAGTCGATAGCAAAAAGGAAATTA
TTGACACCTGAAGATGTGGAAGATGTAAGGAGAGAAATCCAGATAATGCATCACTTATCT
GGAAATCCTAATGTCATTTCAATAAAAGCGGCGTACGAGGATGGTGTTGCGGTTCATGTT
GTGATGGAACTATGTTCAGGAGGCGAGCTCTTTGATAGGATTGTTAAGCAGGGACATTAC
ACGGAGAGACAAGCGGCTGAGCTTGCAAGGACAATAGTTGGTGTAGTAGAAGCCTGCCAT
GCTCTAGGAGTGTTGCACTTGGACCTTAAGCCTGAGAATTTTCTCTTTGTCAACGAGAAA
GAGGATTCACCTCTAAAGATTATAGATTTCGGGCTATCAATGTTTTTCAAGCCAGGGCAA
ATATTCTCTGATATTGTTGGAAGTCCTTATTATGTTGCTCCAGAAGTTCTACAAAAGCGT
TATGGTCAAGAAGCTGATATCTGGAGTGCAGGTGTAATAATTTACATTCTTCTCACTGGT
GTACCTCCATTTTGGGGTGAAAGTGAGCAGGAAATATTTGACGAGGTTTTACGTGCCGAT
ATTGACTTCACATCAGATCCTTGGCCTAACATCTCTGGAGATGCAAAAGATCTGGTGAAG
AGAATGCTTGTTAGGGACCCGAGGCAACGACTTACTGCACATGAAGTTCTATGCCATCCT
TGGGTGAAGATTGATGGTGTGGCTCCGGATAAGCCTCTTGATTCTGCAGTGTTGAGTCGC
TTAACTCAGTTTTCTGCCATGAACAAGCTTAAGAAAATGGCTCTCATGGTTATTGCAGAG
AGTCTTTCTGAAGAGGAAATTGCAGGCTTGAAAGAGATGTTCAAAATGATTGACACAGAT
GACAGTGGACATATTACTTTAGATGAACTGAAGGTTGGACTTAAGCAATTTGGGGCTGAT
CTTAGTGAGACAGAGATACGAGACTTGATGAAAGCGGCTGACGTTGACAACAGTGGTACC
ATTGACTATGGGGAATTCATAGCTGCAATGCTTCACGTCAACAAAGCTGAGAAGGAAGAT
TATCTCTCTGCTGCTTTTTCATATTTTGACAAAGATGGGAGCGGGTATATTACTGCAGAT
GAACTTCAAAAGGCTTGTGAGGACTTTGGCATGAAGGATGTCCGCTTGGAAGAAATCATT
CAAGAAGTTGATCAAGACAACGATGGACGGATAGATTATAGCGAGTTTGTGGCGATGATG
CAAAAAGGAAATGCAAATTTCGGTAACAGACGCTTGCCCAATAATTTCAGCATCGGATTT
CGAGATGCAACAAAGGTTTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049071
PEP Infomation

pacid=37476750 transcript=PGSC0003DMT400072554 locus=PGSC0003DMG400028229 ID=PGSC0003DMT400072554.v4.03 annot-version=v4.03
Sequence

MGNNCVHSKFTKGGFFNLFFWRSRSPDMITNKKKPKGIEHSTDKQPERENSIQNKPPEMV
MIDREKPDQEHKKDTQVVKQEKISVDLKPNEAIQPEKSDNTIHQKAKPKESAKPKKPHVK
RMLSAGLQVESVLKTKTGLLKEHYDLGDKLGHGQFGTTFLCVEKATGEKYACKSIAKRKL
LTPEDVEDVRREIQIMHHLSGNPNVISIKAAYEDGVAVHVVMELCSGGELFDRIVKQGHY
TERQAAELARTIVGVVEACHALGVLHLDLKPENFLFVNEKEDSPLKIIDFGLSMFFKPGQ
IFSDIVGSPYYVAPEVLQKRYGQEADIWSAGVIIYILLTGVPPFWGESEQEIFDEVLRAD
IDFTSDPWPNISGDAKDLVKRMLVRDPRQRLTAHEVLCHPWVKIDGVAPDKPLDSAVLSR
LTQFSAMNKLKKMALMVIAESLSEEEIAGLKEMFKMIDTDDSGHITLDELKVGLKQFGAD
LSETEIRDLMKAADVDNSGTIDYGEFIAAMLHVNKAEKEDYLSAAFSYFDKDGSGYITAD
ELQKACEDFGMKDVRLEEIIQEVDQDNDGRIDYSEFVAMMQKGNANFGNRRLPNNFSIGF
RDATKVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400072554
Transcript Infomation

pacid=37476750 locus=PGSC0003DMG400028229 ID=PGSC0003DMT400072554.v4.03 annot-version=v4.03
Sequence

ATGGGAAATAATTGTGTTCATTCTAAGTTTACAAAGGGTGGGTTCTTCAACTTATTCTTT
TGGCGATCTCGATCACCGGATATGATTACTAATAAGAAAAAACCAAAGGGTATAGAACAT
TCTACAGACAAACAACCTGAACGTGAGAACTCCATTCAGAATAAACCCCCAGAAATGGTG
ATGATAGACAGGGAAAAGCCCGATCAGGAACACAAGAAAGACACTCAGGTAGTTAAACAG
GAGAAGATATCAGTTGATTTGAAACCGAATGAAGCAATACAACCTGAAAAGTCTGACAAT
ACAATCCATCAAAAGGCGAAACCAAAAGAGTCTGCAAAACCGAAGAAGCCACATGTCAAG
AGAATGCTTAGTGCAGGACTCCAGGTTGAGTCTGTGTTGAAAACAAAAACTGGTCTTCTG
AAGGAGCATTATGATTTGGGAGATAAACTTGGACATGGCCAATTTGGGACAACATTTCTT
TGCGTTGAAAAAGCAACAGGGGAAAAGTATGCATGTAAGTCGATAGCAAAAAGGAAATTA
TTGACACCTGAAGATGTGGAAGATGTAAGGAGAGAAATCCAGATAATGCATCACTTATCT
GGAAATCCTAATGTCATTTCAATAAAAGCGGCGTACGAGGATGGTGTTGCGGTTCATGTT
GTGATGGAACTATGTTCAGGAGGCGAGCTCTTTGATAGGATTGTTAAGCAGGGACATTAC
ACGGAGAGACAAGCGGCTGAGCTTGCAAGGACAATAGTTGGTGTAGTAGAAGCCTGCCAT
GCTCTAGGAGTGTTGCACTTGGACCTTAAGCCTGAGAATTTTCTCTTTGTCAACGAGAAA
GAGGATTCACCTCTAAAGATTATAGATTTCGGGCTATCAATGTTTTTCAAGCCAGGGCAA
ATATTCTCTGATATTGTTGGAAGTCCTTATTATGTTGCTCCAGAAGTTCTACAAAAGCGT
TATGGTCAAGAAGCTGATATCTGGAGTGCAGGTGTAATAATTTACATTCTTCTCACTGGT
GTACCTCCATTTTGGGGTGAAAGTGAGCAGGAAATATTTGACGAGGTTTTACGTGCCGAT
ATTGACTTCACATCAGATCCTTGGCCTAACATCTCTGGAGATGCAAAAGATCTGGTGAAG
AGAATGCTTGTTAGGGACCCGAGGCAACGACTTACTGCACATGAAGTTCTATGCCATCCT
TGGGTGAAGATTGATGGTGTGGCTCCGGATAAGCCTCTTGATTCTGCAGTGTTGAGTCGC
TTAACTCAGTTTTCTGCCATGAACAAGCTTAAGAAAATGGCTCTCATGGTTATTGCAGAG
AGTCTTTCTGAAGAGGAAATTGCAGGCTTGAAAGAGATGTTCAAAATGATTGACACAGAT
GACAGTGGACATATTACTTTAGATGAACTGAAGGTTGGACTTAAGCAATTTGGGGCTGAT
CTTAGTGAGACAGAGATACGAGACTTGATGAAAGCGGCTGACGTTGACAACAGTGGTACC
ATTGACTATGGGGAATTCATAGCTGCAATGCTTCACGTCAACAAAGCTGAGAAGGAAGAT
TATCTCTCTGCTGCTTTTTCATATTTTGACAAAGATGGGAGCGGGTATATTACTGCAGAT
GAACTTCAAAAGGCTTGTGAGGACTTTGGCATGAAGGATGTCCGCTTGGAAGAAATCATT
CAAGAAGTTGATCAAGACAACGATGGACGGATAGATTATAGCGAGTTTGTGGCGATGATG
CAAAAAGGAAATGCAAATTTCGGTAACAGACGCTTGCCCAATAATTTCAGCATCGGATTT
CGAGATGCAACAAAGGTTTGCTGA