Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072539
CDS Infomation

pacid=37477346 polypeptide=PGSC0003DMP400049058 locus=PGSC0003DMG400028223 ID=PGSC0003DMT400072539.v4.03 annot-version=v4.03
Sequence

ATGACCATGCTGAATCCTCAACCGCTGGATCAGCAGGAAGACGAGGAGATGCTTGTGCCA
CATTCTGAATTAGTTGAAGGTCCTCAGCCGTTAGTCGAAGGGCCTCAGCCAATGGAAGTG
GCAGCTCCTGAGAATGCTACTACTGGGGAGAACCAAGCTGTGGATGAGCCTCAGGCTTCC
CGGTTTACCTGGACAATTGACGAATTTTCTCGGTTATCTGTGAAGAAGCTATATTCTGAG
CCTTTTGTTGTTGGTAGTTATAAATGGAGAGTGCTTATATTTCCAAAAGGAAACAACGTG
GAGTGTTTGTCAATGTATTTAGATGTGGCAGAGTCAGCTACATTGCCATATGGGTGGAAC
AGATATGCTCAGTTCAGCTTAACAGTTGTAAATCAAATAAACCCCAAATATTCAGTGAAA
AAAGAGACGCAGCACCAGTTTAACCAAAGAGAGAGTGATTGGGGCTTCACATCATTCATG
CTTCTAAGTGATCTTTATGATCCCAATAAGGGATATCTTGTAAATGATAAAGTTGTTATT
GAAGCTGATGTTGCTGTACGGAAGGTCATTGATTACTGGACATATGACTCGAAGAAAGAG
ACGGGATATGTTGGGCTTAAGAATCAGGGAGCTACTTGTTACATGAACTCTCTCCTTCAA
ACCTTGTACCATATCCCCTACTTTAGAAAGGCTGTGTATCATATGCCAACCACAGAGAAT
GACATGCCATCAGGGAGCATTCCATTGGCTCTGCAAAGTTTATTTTATAAGCTCCAATAT
AGTGATACCAGTGTGGCGACAAAAGAATTGACAAAATCTTTTGGATGGGACACTTATGAT
TCATTCATGCAGCATGATGTGCAAGAACTAAACAGAGTGTTGTGTGAAAAGCTTGAAGAC
AAGATGAAGGGTACGGTTGTGGAAGGGACAATTCAGAAGTTATTTGAGGGGCACCATATG
AATTACATAGAATGTATTAATGTGGACTTCAAATCAACGAGAAAAGAGTCATTTTATGAT
CTTCAGCTTGATGTTAAAGGCTGCCGCGATGTTTATGCTTCTTTTGACAAATATGTTGAA
GTCGAACGTCTAGAAGGCGATAATAAGTACCATGCTGAAGCACATGGCTTGCAGGATGCA
AAAAAGGGTGTACTGTTTATTGACTTCCCTCCAGTTCTTCAGCTTCAGTTAAAGAGGTTC
GAATATGATTTCATGCGAGATACTATGGTTAAGATAAATGACCGCTATGAATTTCCTCTA
GAGCTTGACCTTGATAGGGAGAACGGAAAATATTTGTCTCCTGATGCAGATAGGAGTGTA
CGGAATCTCTATACACTTCATAGTGTGTTGGTTCATAGCGGTGGTGTGCATGGTGGACAT
TATTATGCTTTCATCAGGCCAACACTGTCAGATCAATGGTATAAGTTTGATGACGAACGG
GTGACAAAAGAAGACAATAAGAGGGCTCTAGAGGAACAATATGGTGGAGAGGAGGAGTTG
CCACAGACAAATCCCGGCTTCAATAACACTCCCTTCAAGTTTACAAAATACTCCAATGCT
TACATGCTTGTTTATATACGTGAGAGTGACAAGGATAAAATAATCTGTGATGTTGGTGAG
AAGGACATTGCGGAACACTTAAGGATAAGGTTGAAGAAAGAACAAGAAGAGAAGGAGGAC
AAGAGACGATACAAAGCACAGGCCCACCTTTATACAATCATCAAGGTTGCACGGGATGAG
GATCTTAGAGAACAGATTGGTAAGGAGATATATTTTGATCTTGTTGATCATGACAAAGTT
CGTAGCTTTCGAATCCAGAAACAGCTGCCATTTAACCTTTTCAAGGAGGAGGTTGCAAAA
GAATTGGGTATACCAGTTCAATTCCAGCGTTTCTGGATTTGGGCAAAGCGGCAAAATCAC
ACTTACCGGCCCAATCGCCCATTAACTCCGCAGGAGGAACTACAAACAGTTGGTCAGTTA
AGGGAAGTTTCTAACAAGACCACCAATGCTGAGTTAAAATTATTTTTGGAAGTGAACTGT
GGCCTGGATCTCATTCCTGTTCCTCCACCTGACAAAAGTAAAGATGATATACTCCTTTTC
TTTAAGCTTTATGATCCTGAGAAAGAAGAGCTCCGTTATGTTGGTAGGCTTTTCGTGAAG
AGTACTAGTAAGCCAATTGAGATACTTCCAAAACTTAATGAATTGGCTGGATTTGCTCCT
GACCAAGAAATCGAACTTTTTGAGGAAATAAAGTTTGAACCTTCTGTCATGTGTGAAAGA
CTAGACAGAAAGGCTTCATTTCGATTTAGCCAGATTGAAGATGGGGATATTATATGCTTT
CAGAAGAAAGCTTTTCCTGAAGTTGAAGAACAAGTTCGATTTCCAGATGTTTCTTCATAT
ATGGAGTATGTCAAAAATCGCCAGATTGTCCACTTCAGAGCACTGGAAAAACCGAAGGAA
GATGATTTCTGTCTGGAGTTAGCAAAAAGTGATACATATGATGAAGTAGTGGAGAGAGTG
GCGCAGAGGCTTGGTGTGGATGATTCCTCCAAAATTAGGCTTACTCCTCACAACTGCTAC
TCACAGCAACCCAAGCCCAACCCCATCAAATATCGGTCTGTGGATCATTTGGTAGACATG
CTTATCCATTACAATCAGATCTCCGATATTCTGTATTATGAAGTTCTGGACATACCTCTG
CCAGAATTACAATGTCTGAAGACGCTCAAAGTTGCCTTCCATCATTCTACGAAGGATGAG
ATTGAAATTCTGAATGTAAGATTGCCTAAGCAGAGTACCGTGGGGGATGTTCTTAATGAA
ATCAAATCAAAGGTAGAGTTGTCCCATCCAAATGCAGAGCTCAGATTACTCGAGGTTTTC
TATCACAAGATTTATAAGATCTTTCCGCTCAGTGAAAAGATTGAGAATATAAATGACCAA
TATTGGACATTGCGGGCAGAGGAAATACCAGAAGAGGAGAAAAACCTTGGTCCCCATGAT
CGTCTAATTCATGTTTACCATTTCACAAAAGAGACTCCACAAAATCAAATGCAAGTGCAG
AATTTTGGAGAACCTTTCTTTCTGGTCATCCATGAAGGTGAAACTTTAGCAGAAATTAAA
GTGCGCATTCAAAAGAAATTGCAGGTCTCGGATGAGGAGTTCTCTAAGTGGAAATTTGCA
TTTTTATCATTGGGGCGCCCAGAATACCTTCAGGACTCAGATATTGTATCCAACCGTTTT
CAGAGGAGAGATGTTTATGGTGCTTGGGAGCAGTACCTTGGATTGGAGCATGCAGATAAT
ACATCTAAGAGGCCATATATTAATCAGAACCGTCACACATTTGAAAAGCCAGTCAAGATA
TACAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400049058
PEP Infomation

pacid=37477346 transcript=PGSC0003DMT400072539 locus=PGSC0003DMG400028223 ID=PGSC0003DMT400072539.v4.03 annot-version=v4.03
Sequence

MTMLNPQPLDQQEDEEMLVPHSELVEGPQPLVEGPQPMEVAAPENATTGENQAVDEPQAS
RFTWTIDEFSRLSVKKLYSEPFVVGSYKWRVLIFPKGNNVECLSMYLDVAESATLPYGWN
RYAQFSLTVVNQINPKYSVKKETQHQFNQRESDWGFTSFMLLSDLYDPNKGYLVNDKVVI
EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEAHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDNKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICDVGE
KDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLREQIGKEIYFDLVDHDKV
RSFRIQKQLPFNLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEELQTVGQL
REVSNKTTNAELKLFLEVNCGLDLIPVPPPDKSKDDILLFFKLYDPEKEELRYVGRLFVK
STSKPIEILPKLNELAGFAPDQEIELFEEIKFEPSVMCERLDRKASFRFSQIEDGDIICF
QKKAFPEVEEQVRFPDVSSYMEYVKNRQIVHFRALEKPKEDDFCLELAKSDTYDEVVERV
AQRLGVDDSSKIRLTPHNCYSQQPKPNPIKYRSVDHLVDMLIHYNQISDILYYEVLDIPL
PELQCLKTLKVAFHHSTKDEIEILNVRLPKQSTVGDVLNEIKSKVELSHPNAELRLLEVF
YHKIYKIFPLSEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETPQNQMQVQ
NFGEPFFLVIHEGETLAEIKVRIQKKLQVSDEEFSKWKFAFLSLGRPEYLQDSDIVSNRF
QRRDVYGAWEQYLGLEHADNTSKRPYINQNRHTFEKPVKIYN*

Transcript Sequence

Transcript ID

PGSC0003DMT400072539
Transcript Infomation

pacid=37477346 locus=PGSC0003DMG400028223 ID=PGSC0003DMT400072539.v4.03 annot-version=v4.03
Sequence

ATGACCATGCTGAATCCTCAACCGCTGGATCAGCAGGAAGACGAGGAGATGCTTGTGCCA
CATTCTGAATTAGTTGAAGGTCCTCAGCCGTTAGTCGAAGGGCCTCAGCCAATGGAAGTG
GCAGCTCCTGAGAATGCTACTACTGGGGAGAACCAAGCTGTGGATGAGCCTCAGGCTTCC
CGGTTTACCTGGACAATTGACGAATTTTCTCGGTTATCTGTGAAGAAGCTATATTCTGAG
CCTTTTGTTGTTGGTAGTTATAAATGGAGAGTGCTTATATTTCCAAAAGGAAACAACGTG
GAGTGTTTGTCAATGTATTTAGATGTGGCAGAGTCAGCTACATTGCCATATGGGTGGAAC
AGATATGCTCAGTTCAGCTTAACAGTTGTAAATCAAATAAACCCCAAATATTCAGTGAAA
AAAGAGACGCAGCACCAGTTTAACCAAAGAGAGAGTGATTGGGGCTTCACATCATTCATG
CTTCTAAGTGATCTTTATGATCCCAATAAGGGATATCTTGTAAATGATAAAGTTGTTATT
GAAGCTGATGTTGCTGTACGGAAGGTCATTGATTACTGGACATATGACTCGAAGAAAGAG
ACGGGATATGTTGGGCTTAAGAATCAGGGAGCTACTTGTTACATGAACTCTCTCCTTCAA
ACCTTGTACCATATCCCCTACTTTAGAAAGGCTGTGTATCATATGCCAACCACAGAGAAT
GACATGCCATCAGGGAGCATTCCATTGGCTCTGCAAAGTTTATTTTATAAGCTCCAATAT
AGTGATACCAGTGTGGCGACAAAAGAATTGACAAAATCTTTTGGATGGGACACTTATGAT
TCATTCATGCAGCATGATGTGCAAGAACTAAACAGAGTGTTGTGTGAAAAGCTTGAAGAC
AAGATGAAGGGTACGGTTGTGGAAGGGACAATTCAGAAGTTATTTGAGGGGCACCATATG
AATTACATAGAATGTATTAATGTGGACTTCAAATCAACGAGAAAAGAGTCATTTTATGAT
CTTCAGCTTGATGTTAAAGGCTGCCGCGATGTTTATGCTTCTTTTGACAAATATGTTGAA
GTCGAACGTCTAGAAGGCGATAATAAGTACCATGCTGAAGCACATGGCTTGCAGGATGCA
AAAAAGGGTGTACTGTTTATTGACTTCCCTCCAGTTCTTCAGCTTCAGTTAAAGAGGTTC
GAATATGATTTCATGCGAGATACTATGGTTAAGATAAATGACCGCTATGAATTTCCTCTA
GAGCTTGACCTTGATAGGGAGAACGGAAAATATTTGTCTCCTGATGCAGATAGGAGTGTA
CGGAATCTCTATACACTTCATAGTGTGTTGGTTCATAGCGGTGGTGTGCATGGTGGACAT
TATTATGCTTTCATCAGGCCAACACTGTCAGATCAATGGTATAAGTTTGATGACGAACGG
GTGACAAAAGAAGACAATAAGAGGGCTCTAGAGGAACAATATGGTGGAGAGGAGGAGTTG
CCACAGACAAATCCCGGCTTCAATAACACTCCCTTCAAGTTTACAAAATACTCCAATGCT
TACATGCTTGTTTATATACGTGAGAGTGACAAGGATAAAATAATCTGTGATGTTGGTGAG
AAGGACATTGCGGAACACTTAAGGATAAGGTTGAAGAAAGAACAAGAAGAGAAGGAGGAC
AAGAGACGATACAAAGCACAGGCCCACCTTTATACAATCATCAAGGTTGCACGGGATGAG
GATCTTAGAGAACAGATTGGTAAGGAGATATATTTTGATCTTGTTGATCATGACAAAGTT
CGTAGCTTTCGAATCCAGAAACAGCTGCCATTTAACCTTTTCAAGGAGGAGGTTGCAAAA
GAATTGGGTATACCAGTTCAATTCCAGCGTTTCTGGATTTGGGCAAAGCGGCAAAATCAC
ACTTACCGGCCCAATCGCCCATTAACTCCGCAGGAGGAACTACAAACAGTTGGTCAGTTA
AGGGAAGTTTCTAACAAGACCACCAATGCTGAGTTAAAATTATTTTTGGAAGTGAACTGT
GGCCTGGATCTCATTCCTGTTCCTCCACCTGACAAAAGTAAAGATGATATACTCCTTTTC
TTTAAGCTTTATGATCCTGAGAAAGAAGAGCTCCGTTATGTTGGTAGGCTTTTCGTGAAG
AGTACTAGTAAGCCAATTGAGATACTTCCAAAACTTAATGAATTGGCTGGATTTGCTCCT
GACCAAGAAATCGAACTTTTTGAGGAAATAAAGTTTGAACCTTCTGTCATGTGTGAAAGA
CTAGACAGAAAGGCTTCATTTCGATTTAGCCAGATTGAAGATGGGGATATTATATGCTTT
CAGAAGAAAGCTTTTCCTGAAGTTGAAGAACAAGTTCGATTTCCAGATGTTTCTTCATAT
ATGGAGTATGTCAAAAATCGCCAGATTGTCCACTTCAGAGCACTGGAAAAACCGAAGGAA
GATGATTTCTGTCTGGAGTTAGCAAAAAGTGATACATATGATGAAGTAGTGGAGAGAGTG
GCGCAGAGGCTTGGTGTGGATGATTCCTCCAAAATTAGGCTTACTCCTCACAACTGCTAC
TCACAGCAACCCAAGCCCAACCCCATCAAATATCGGTCTGTGGATCATTTGGTAGACATG
CTTATCCATTACAATCAGATCTCCGATATTCTGTATTATGAAGTTCTGGACATACCTCTG
CCAGAATTACAATGTCTGAAGACGCTCAAAGTTGCCTTCCATCATTCTACGAAGGATGAG
ATTGAAATTCTGAATGTAAGATTGCCTAAGCAGAGTACCGTGGGGGATGTTCTTAATGAA
ATCAAATCAAAGGTAGAGTTGTCCCATCCAAATGCAGAGCTCAGATTACTCGAGGTTTTC
TATCACAAGATTTATAAGATCTTTCCGCTCAGTGAAAAGATTGAGAATATAAATGACCAA
TATTGGACATTGCGGGCAGAGGAAATACCAGAAGAGGAGAAAAACCTTGGTCCCCATGAT
CGTCTAATTCATGTTTACCATTTCACAAAAGAGACTCCACAAAATCAAATGCAAGTGCAG
AATTTTGGAGAACCTTTCTTTCTGGTCATCCATGAAGGTGAAACTTTAGCAGAAATTAAA
GTGCGCATTCAAAAGAAATTGCAGGTCTCGGATGAGGAGTTCTCTAAGTGGAAATTTGCA
TTTTTATCATTGGGGCGCCCAGAATACCTTCAGGACTCAGATATTGTATCCAACCGTTTT
CAGAGGAGAGATGTTTATGGTGCTTGGGAGCAGTACCTTGGATTGGAGCATGCAGATAAT
ACATCTAAGAGGCCATATATTAATCAGAACCGTCACACATTTGAAAAGCCAGTCAAGATA
TACAACTGA