Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072523
CDS Infomation

pacid=37480056 polypeptide=PGSC0003DMP400049047 locus=PGSC0003DMG400028219 ID=PGSC0003DMT400072523.v4.03 annot-version=v4.03
Sequence

ATGGACTTGGAATCGACTAATGAGATTGACCGTGTCGCCGGATTCATCTCGGCGAGAGCT
TTCCGACGAGTTGCTCTTCAGTTCCCAGATAAATTATTGAAAGATTCCACGAGGATAGTT
GCTGCTCTACATGAAAAACTTCGCTCATTCAAGCAGTTACATGCTGGAAGCAATGGAGAT
GCAAAGGACGTTAAGCTGTATGTAATGGCGGATACTATGTATGGAAATTGCTGTGTCGAT
GAAGTTGGAGCATCTCATGCCAATGCGGACTGCGTTATCCATTATGGTCATACTTGCTTC
AGTCCGACATCAACTCTTCCCGCATTTCTTGTCCTTGGAAAAGCTTCACTAAATGTGCCC
CTATGTGCTCAAACACTATGCGAGTATACTATAAAAGCTGGCAAACCTATTTTGGTTCTT
TATGGACTTGAATATACACATGCAATCACAGAAATCAAAGCATCAGTGGGCGCTCAAGTA
TGCTCCGAGCTGGAAGTTCATTATGCTGATATTATGTCTCCAATTATAACTCCACCAGAG
ACTTTTAACTCGATGAATGAGCAACCAGAACAAAGTGATGGTCAATGTGCAAATGGCTGT
TCTATTGAGGAGAATGATGCAGCATATTGTGTTGGAGGGTTGACGTGGTCGTTACCAGTG
GGACGCAGGATTGAGGACTACTTGATTTTCTATGTTGGTTCAGATGACCCAGCCTTCGCA
AATATACTAATGACATACAATGCTTGTGAAATAGTCAGATATGATGCTACTGAAGATAAT
TTGGTGAATGACTTTTCTCAGCAGAAAAGGATTCTTAAGCGTAGGTACTTCCTTATTGAG
AAAGCAAAGGATGCTAGCATCATAGGGATCTTGGTAGGAACACTTGGAGTAGCTGGTTAC
CTCCACATGATTCATCAAATGAAAGACTTGATTACTCGAGCTGGGAAGAAAGCCTATACT
TTTGTTATGGGGAGACCTAACCCTGCAAAGCTTGCCAACTTCCCTGAGTGCGATATCTTC
GTTTATGTTTCTTGTGCACAAACTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTT
ATTACTCCTTTTGAAGCAATGATTGCTTTCGGCAGAGGAAGCGAATGGACTGGGGCTTAT
GTGACAGAATTTCGGGATTTGATTACTTCTTCCCCCATGGAAGCGAAAAACCAATCAGAA
GCTCGGTTTTCATTCATTCAGGGTGGATACGTGGAAGATGTTGAACAACAAGAGGTTGAA
GAAGTTGAAGATGGAGTTTCTGCTTTAGTGAACATCACAGAGAAGGCTTTGCGTGTTCGT
GACAAGGACTCACAAACTCTAATGCCCGGAACAGCTAAATCTGGTGCAGAGTACTTCGCA
ACTAGGTCATATCACGGCCTTGACATTCATCCTGAAAATAATTTCTCCGAGCCGTTTTTG
ATTGGTAAAAGTGGGAGGGCATCAGGATACAAGAATGAAACTGCACAACAAAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049047
PEP Infomation

pacid=37480056 transcript=PGSC0003DMT400072523 locus=PGSC0003DMG400028219 ID=PGSC0003DMT400072523.v4.03 annot-version=v4.03
Sequence

MDLESTNEIDRVAGFISARAFRRVALQFPDKLLKDSTRIVAALHEKLRSFKQLHAGSNGD
AKDVKLYVMADTMYGNCCVDEVGASHANADCVIHYGHTCFSPTSTLPAFLVLGKASLNVP
LCAQTLCEYTIKAGKPILVLYGLEYTHAITEIKASVGAQVCSELEVHYADIMSPIITPPE
TFNSMNEQPEQSDGQCANGCSIEENDAAYCVGGLTWSLPVGRRIEDYLIFYVGSDDPAFA
NILMTYNACEIVRYDATEDNLVNDFSQQKRILKRRYFLIEKAKDASIIGILVGTLGVAGY
LHMIHQMKDLITRAGKKAYTFVMGRPNPAKLANFPECDIFVYVSCAQTALLDSKEFLAPV
ITPFEAMIAFGRGSEWTGAYVTEFRDLITSSPMEAKNQSEARFSFIQGGYVEDVEQQEVE
EVEDGVSALVNITEKALRVRDKDSQTLMPGTAKSGAEYFATRSYHGLDIHPENNFSEPFL
IGKSGRASGYKNETAQQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400072523
Transcript Infomation

pacid=37480056 locus=PGSC0003DMG400028219 ID=PGSC0003DMT400072523.v4.03 annot-version=v4.03
Sequence

ATGGACTTGGAATCGACTAATGAGATTGACCGTGTCGCCGGATTCATCTCGGCGAGAGCT
TTCCGACGAGTTGCTCTTCAGTTCCCAGATAAATTATTGAAAGATTCCACGAGGATAGTT
GCTGCTCTACATGAAAAACTTCGCTCATTCAAGCAGTTACATGCTGGAAGCAATGGAGAT
GCAAAGGACGTTAAGCTGTATGTAATGGCGGATACTATGTATGGAAATTGCTGTGTCGAT
GAAGTTGGAGCATCTCATGCCAATGCGGACTGCGTTATCCATTATGGTCATACTTGCTTC
AGTCCGACATCAACTCTTCCCGCATTTCTTGTCCTTGGAAAAGCTTCACTAAATGTGCCC
CTATGTGCTCAAACACTATGCGAGTATACTATAAAAGCTGGCAAACCTATTTTGGTTCTT
TATGGACTTGAATATACACATGCAATCACAGAAATCAAAGCATCAGTGGGCGCTCAAGTA
TGCTCCGAGCTGGAAGTTCATTATGCTGATATTATGTCTCCAATTATAACTCCACCAGAG
ACTTTTAACTCGATGAATGAGCAACCAGAACAAAGTGATGGTCAATGTGCAAATGGCTGT
TCTATTGAGGAGAATGATGCAGCATATTGTGTTGGAGGGTTGACGTGGTCGTTACCAGTG
GGACGCAGGATTGAGGACTACTTGATTTTCTATGTTGGTTCAGATGACCCAGCCTTCGCA
AATATACTAATGACATACAATGCTTGTGAAATAGTCAGATATGATGCTACTGAAGATAAT
TTGGTGAATGACTTTTCTCAGCAGAAAAGGATTCTTAAGCGTAGGTACTTCCTTATTGAG
AAAGCAAAGGATGCTAGCATCATAGGGATCTTGGTAGGAACACTTGGAGTAGCTGGTTAC
CTCCACATGATTCATCAAATGAAAGACTTGATTACTCGAGCTGGGAAGAAAGCCTATACT
TTTGTTATGGGGAGACCTAACCCTGCAAAGCTTGCCAACTTCCCTGAGTGCGATATCTTC
GTTTATGTTTCTTGTGCACAAACTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTT
ATTACTCCTTTTGAAGCAATGATTGCTTTCGGCAGAGGAAGCGAATGGACTGGGGCTTAT
GTGACAGAATTTCGGGATTTGATTACTTCTTCCCCCATGGAAGCGAAAAACCAATCAGAA
GCTCGGTTTTCATTCATTCAGGGTGGATACGTGGAAGATGTTGAACAACAAGAGGTTGAA
GAAGTTGAAGATGGAGTTTCTGCTTTAGTGAACATCACAGAGAAGGCTTTGCGTGTTCGT
GACAAGGACTCACAAACTCTAATGCCCGGAACAGCTAAATCTGGTGCAGAGTACTTCGCA
ACTAGGTCATATCACGGCCTTGACATTCATCCTGAAAATAATTTCTCCGAGCCGTTTTTG
ATTGGTAAAAGTGGGAGGGCATCAGGATACAAGAATGAAACTGCACAACAAAGTTAG