Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072514
CDS Infomation

pacid=37479500 polypeptide=PGSC0003DMP400049039 locus=PGSC0003DMG400028213 ID=PGSC0003DMT400072514.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGAGGAATGTACATTTGATGGGATTTTTTGGTCGAAAATCCTTGTTTAGTATG
TTTTCAATTACTTCAATCTTGTTCATGTTATCTTTGTTATTTGTGATGCGTTCAACTGGA
CATCGTCACTTTTTTTACCTCAATGTGTTACCTAAGTCCAAGGTTCTTGCTTTGTCTGAA
GAAGGTTATTCACAATCTAGTAGTCAAAGTAATTATGAGGTCTCGAATTCAAATCGAGCG
GTGTCTAACAAAGGAACATTGGAAAAGTATAATGTGTTAAAGTGTAATCCTAGTAAACAA
GTCCTTAAAGTTTTCATGTATGACTTGCCCCCGCAATTTCATTTTGAATTGTTGGGATGG
AAGGCTGAGGGAAAGAGTGTCTGGCCAGATATTAGGAAACTGGTTCCTACTTATCCAGGC
GGATTAAACGTGCAGCATAGTATAGAGTATTGGTTGACATTGGATCTTTTGTTGTCTGAA
TTTGATGACAATTTGAATAGTCGAAGTGCTAGTGCAATAAGAGTGCATAATTCAAGTGAA
GCTGATGTGATATTTGTTCCTTTCTTTTCATCGGTTTGCTATAATCGGTTTTCAAAGGTT
AAGCAAAAGAAGAAAACAAGTCCAAACACCTTGCTGCAGAAAAAATTGGTTGCCTTTTTG
ACAACACAAGAGGAATGGAAAAGATCAGGGGGGAAAGACCATATAATTCTTGCACACCAT
CCAAATAGCCTTTTGGATGCAAGAATGAAGTTGTGGCCTGCAATGTTCATACTTTCAGAC
TTCGGAAGGTATCCTCCCACAGTAGCTAACGTCGAAAAAGATGTGATTGCACCTTACAAA
CATGTTATCAGGAACTATGAGAATGACACTTCTGATTTTGATAGTCGACCAACATTGCTC
TACTTCCAGGGAGCTATTTACAGAAAAGATGGTGGATCTATTCGACAAGAGTTATTCTAT
ATGCTGAAAGATGAGAAAGATGTTCATTTCTCCTTTGGAAGTATACTAAAAGGCGGAGTA
AAACAAGCAACAGACGGTATGCACTCTTCCAAATTCTGTCTCAACATTGCAGGTGACACT
CCCTCATCAAACCGTCTCTTTGATGCTATTGCATCTCACTGTGTACCAGTCATCATTAGT
GACGAAATAGAGCTTCCCTACGAAGATGTTCTTGACTATTCAGAGTTCTGCATATTCGTC
CGTACATCAGATGCTATCAAACCACATTTCCTCATAAACTTCATCAGGAGCATCACGAAA
CAAGAGTGGACTAGAATGTGGGAAAGGTTAAAAGAGATCGAAAATTTCTTTGAGTATCAA
TATCCTTCCAAGGACAACGATGCTGTTCAAATGGTCTGGCAAGCTATCGCTCGTAAGGTT
CCTACTGTCAATTTTAAGGTGCATAAATCATCGAGATATTCTCGATCACCTGTTTCGAAG
GAAGGAGGGCTAAAATCATTTCCCTTGCCAAAGAATATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400049039
PEP Infomation

pacid=37479500 transcript=PGSC0003DMT400072514 locus=PGSC0003DMG400028213 ID=PGSC0003DMT400072514.v4.03 annot-version=v4.03
Sequence

MAERNVHLMGFFGRKSLFSMFSITSILFMLSLLFVMRSTGHRHFFYLNVLPKSKVLALSE
EGYSQSSSQSNYEVSNSNRAVSNKGTLEKYNVLKCNPSKQVLKVFMYDLPPQFHFELLGW
KAEGKSVWPDIRKLVPTYPGGLNVQHSIEYWLTLDLLLSEFDDNLNSRSASAIRVHNSSE
ADVIFVPFFSSVCYNRFSKVKQKKKTSPNTLLQKKLVAFLTTQEEWKRSGGKDHIILAHH
PNSLLDARMKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRNYENDTSDFDSRPTLL
YFQGAIYRKDGGSIRQELFYMLKDEKDVHFSFGSILKGGVKQATDGMHSSKFCLNIAGDT
PSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFVRTSDAIKPHFLINFIRSITK
QEWTRMWERLKEIENFFEYQYPSKDNDAVQMVWQAIARKVPTVNFKVHKSSRYSRSPVSK
EGGLKSFPLPKNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400072514
Transcript Infomation

pacid=37479500 locus=PGSC0003DMG400028213 ID=PGSC0003DMT400072514.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGAGGAATGTACATTTGATGGGATTTTTTGGTCGAAAATCCTTGTTTAGTATG
TTTTCAATTACTTCAATCTTGTTCATGTTATCTTTGTTATTTGTGATGCGTTCAACTGGA
CATCGTCACTTTTTTTACCTCAATGTGTTACCTAAGTCCAAGGTTCTTGCTTTGTCTGAA
GAAGGTTATTCACAATCTAGTAGTCAAAGTAATTATGAGGTCTCGAATTCAAATCGAGCG
GTGTCTAACAAAGGAACATTGGAAAAGTATAATGTGTTAAAGTGTAATCCTAGTAAACAA
GTCCTTAAAGTTTTCATGTATGACTTGCCCCCGCAATTTCATTTTGAATTGTTGGGATGG
AAGGCTGAGGGAAAGAGTGTCTGGCCAGATATTAGGAAACTGGTTCCTACTTATCCAGGC
GGATTAAACGTGCAGCATAGTATAGAGTATTGGTTGACATTGGATCTTTTGTTGTCTGAA
TTTGATGACAATTTGAATAGTCGAAGTGCTAGTGCAATAAGAGTGCATAATTCAAGTGAA
GCTGATGTGATATTTGTTCCTTTCTTTTCATCGGTTTGCTATAATCGGTTTTCAAAGGTT
AAGCAAAAGAAGAAAACAAGTCCAAACACCTTGCTGCAGAAAAAATTGGTTGCCTTTTTG
ACAACACAAGAGGAATGGAAAAGATCAGGGGGGAAAGACCATATAATTCTTGCACACCAT
CCAAATAGCCTTTTGGATGCAAGAATGAAGTTGTGGCCTGCAATGTTCATACTTTCAGAC
TTCGGAAGGTATCCTCCCACAGTAGCTAACGTCGAAAAAGATGTGATTGCACCTTACAAA
CATGTTATCAGGAACTATGAGAATGACACTTCTGATTTTGATAGTCGACCAACATTGCTC
TACTTCCAGGGAGCTATTTACAGAAAAGATGGTGGATCTATTCGACAAGAGTTATTCTAT
ATGCTGAAAGATGAGAAAGATGTTCATTTCTCCTTTGGAAGTATACTAAAAGGCGGAGTA
AAACAAGCAACAGACGGTATGCACTCTTCCAAATTCTGTCTCAACATTGCAGGTGACACT
CCCTCATCAAACCGTCTCTTTGATGCTATTGCATCTCACTGTGTACCAGTCATCATTAGT
GACGAAATAGAGCTTCCCTACGAAGATGTTCTTGACTATTCAGAGTTCTGCATATTCGTC
CGTACATCAGATGCTATCAAACCACATTTCCTCATAAACTTCATCAGGAGCATCACGAAA
CAAGAGTGGACTAGAATGTGGGAAAGGTTAAAAGAGATCGAAAATTTCTTTGAGTATCAA
TATCCTTCCAAGGACAACGATGCTGTTCAAATGGTCTGGCAAGCTATCGCTCGTAAGGTT
CCTACTGTCAATTTTAAGGTGCATAAATCATCGAGATATTCTCGATCACCTGTTTCGAAG
GAAGGAGGGCTAAAATCATTTCCCTTGCCAAAGAATATTTAG