Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072477
CDS Infomation

pacid=37479657 polypeptide=PGSC0003DMP400049009 locus=PGSC0003DMG400028196 ID=PGSC0003DMT400072477.v4.03 annot-version=v4.03
Sequence

ATGGGTAAAGTAGAGGAAGAGCATCAACTACCCATTTCATCAGTAGGTGCAAACAGTACA
GAACAAAATGTAGAGAATAGGTGTGGAAGATTCAGTGGTTGGGTTAAGTTTAGATGTGTA
CTTGCTTTGCTGTTTGGTGGAGCTGTATTGCTGTCTGCTGTGTTCTTATTGCCAATTTTT
CATAATGGAGATCTTGGGGATCTAGATCTAGACCCCAAGTTTAGAGGTCATGACATAGTA
GCCAGTTTCATGCTTGAGAAGCCAGTTTCTTTGATGGAGGATTATATCGTGCAACTTGAG
GATGATATTTTTGATGAAATAAGTGTTTCCAACACTAAAGTGGAAATAATATCATTAGAA
AATGTAGCTGGATCAAACATAACAAGGGTTGTCTTTGCTGTTGATTCTGATTTGAAAAAT
ATGAGGATCTCTCCAACTGCTCTGAGTTTAGTCAGATCCGAGATTGAAACTGTAATTACT
CACCAGTCATTTCTGCACCTGACGCCATCTTTGTTTGGGGATCCTTTTTCTTTCGATGTG
CTGAAACTCAGAGGAGGGATTACAGTGATCCCTAAACAAAGTGTATTCCTTATGCAAAAT
GTGCAGATCCAATTCAACTTCACATTGAACTCCTCTATTGATGAAATTCAAGATAAATTT
GATGAGCTAACAAGCCAGCTGAAATCAGGGGTACATCTTGCATCATACGAGAACTTATAT
ATCAAGCTGACTAATACAAGGGGTTCGACGGTGGATCCTCCCACTATTATTCAGTGTCAA
GTTTATTTAGCAGTTGGGATTCCTTCCAATTCTAGGTTGAAGCAGTTGGCTCAGACCATT
GGTTCTAATTCTAAAAACCTTGGCCTGAATAACACTGTATTTGGGAAGGTTAAACAAGTT
AGCCTGTCTTCTATTTTAAAACATTCTCTTGGTGGTAATGGCGGTAGTCCTACACCTTCT
CCAGCTCCTCAACCTTATCACCACCATCATCACCATCACCACCATAGCCATCACCATCAC
CAAGGTCCAAGTGTTGCTCCTGCAATTTCACCTGCTCCGAGGGCTGAGAAAGGTGGATCA
GTTAGCCGGAAAGTTTCACCAGTATCTGCACCAGTGCCAGCATCTGCACCAGTGCTTGCA
CCTGCCCCTGTACATCCAACTCACAAACGTCATACGGCCCAACCTCCTTGTCATTTTGGG
AGATACCCAAAGAAGGCAAAGAGTCATCCTCCTGCGCCAGCTCCTGTTCGAGCACCAGTC
CCTGCACCTCACATTGCTCCCTCTCCACATCAACAAATACATGCTCCAACTCCTGTCTTG
CATAAAATCCCTGTATCAAGCCCATTGCCCCATGTAGTGTATTCTCATGCACAGCCTCCT
CCAAGGACACCTTCAGTTGCAGAGCCTCCGCAGAGAACACCTTCCGTTTCAAACTTGACA
TCTTCATCTTCACCAGGTATCTTTTCTTCAAACTTGTGGGTGCTCCCGCTGTTTCTACTT
CTTGTACCGCGTATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400049009
PEP Infomation

pacid=37479657 transcript=PGSC0003DMT400072477 locus=PGSC0003DMG400028196 ID=PGSC0003DMT400072477.v4.03 annot-version=v4.03
Sequence

MGKVEEEHQLPISSVGANSTEQNVENRCGRFSGWVKFRCVLALLFGGAVLLSAVFLLPIF
HNGDLGDLDLDPKFRGHDIVASFMLEKPVSLMEDYIVQLEDDIFDEISVSNTKVEIISLE
NVAGSNITRVVFAVDSDLKNMRISPTALSLVRSEIETVITHQSFLHLTPSLFGDPFSFDV
LKLRGGITVIPKQSVFLMQNVQIQFNFTLNSSIDEIQDKFDELTSQLKSGVHLASYENLY
IKLTNTRGSTVDPPTIIQCQVYLAVGIPSNSRLKQLAQTIGSNSKNLGLNNTVFGKVKQV
SLSSILKHSLGGNGGSPTPSPAPQPYHHHHHHHHHSHHHHQGPSVAPAISPAPRAEKGGS
VSRKVSPVSAPVPASAPVLAPAPVHPTHKRHTAQPPCHFGRYPKKAKSHPPAPAPVRAPV
PAPHIAPSPHQQIHAPTPVLHKIPVSSPLPHVVYSHAQPPPRTPSVAEPPQRTPSVSNLT
SSSSPGIFSSNLWVLPLFLLLVPRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400072477
Transcript Infomation

pacid=37479657 locus=PGSC0003DMG400028196 ID=PGSC0003DMT400072477.v4.03 annot-version=v4.03
Sequence

ATGGGTAAAGTAGAGGAAGAGCATCAACTACCCATTTCATCAGTAGGTGCAAACAGTACA
GAACAAAATGTAGAGAATAGGTGTGGAAGATTCAGTGGTTGGGTTAAGTTTAGATGTGTA
CTTGCTTTGCTGTTTGGTGGAGCTGTATTGCTGTCTGCTGTGTTCTTATTGCCAATTTTT
CATAATGGAGATCTTGGGGATCTAGATCTAGACCCCAAGTTTAGAGGTCATGACATAGTA
GCCAGTTTCATGCTTGAGAAGCCAGTTTCTTTGATGGAGGATTATATCGTGCAACTTGAG
GATGATATTTTTGATGAAATAAGTGTTTCCAACACTAAAGTGGAAATAATATCATTAGAA
AATGTAGCTGGATCAAACATAACAAGGGTTGTCTTTGCTGTTGATTCTGATTTGAAAAAT
ATGAGGATCTCTCCAACTGCTCTGAGTTTAGTCAGATCCGAGATTGAAACTGTAATTACT
CACCAGTCATTTCTGCACCTGACGCCATCTTTGTTTGGGGATCCTTTTTCTTTCGATGTG
CTGAAACTCAGAGGAGGGATTACAGTGATCCCTAAACAAAGTGTATTCCTTATGCAAAAT
GTGCAGATCCAATTCAACTTCACATTGAACTCCTCTATTGATGAAATTCAAGATAAATTT
GATGAGCTAACAAGCCAGCTGAAATCAGGGGTACATCTTGCATCATACGAGAACTTATAT
ATCAAGCTGACTAATACAAGGGGTTCGACGGTGGATCCTCCCACTATTATTCAGTGTCAA
GTTTATTTAGCAGTTGGGATTCCTTCCAATTCTAGGTTGAAGCAGTTGGCTCAGACCATT
GGTTCTAATTCTAAAAACCTTGGCCTGAATAACACTGTATTTGGGAAGGTTAAACAAGTT
AGCCTGTCTTCTATTTTAAAACATTCTCTTGGTGGTAATGGCGGTAGTCCTACACCTTCT
CCAGCTCCTCAACCTTATCACCACCATCATCACCATCACCACCATAGCCATCACCATCAC
CAAGGTCCAAGTGTTGCTCCTGCAATTTCACCTGCTCCGAGGGCTGAGAAAGGTGGATCA
GTTAGCCGGAAAGTTTCACCAGTATCTGCACCAGTGCCAGCATCTGCACCAGTGCTTGCA
CCTGCCCCTGTACATCCAACTCACAAACGTCATACGGCCCAACCTCCTTGTCATTTTGGG
AGATACCCAAAGAAGGCAAAGAGTCATCCTCCTGCGCCAGCTCCTGTTCGAGCACCAGTC
CCTGCACCTCACATTGCTCCCTCTCCACATCAACAAATACATGCTCCAACTCCTGTCTTG
CATAAAATCCCTGTATCAAGCCCATTGCCCCATGTAGTGTATTCTCATGCACAGCCTCCT
CCAAGGACACCTTCAGTTGCAGAGCCTCCGCAGAGAACACCTTCCGTTTCAAACTTGACA
TCTTCATCTTCACCAGGTATCTTTTCTTCAAACTTGTGGGTGCTCCCGCTGTTTCTACTT
CTTGTACCGCGTATATAG