Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072467
CDS Infomation

pacid=37479597 polypeptide=PGSC0003DMP400049007 locus=PGSC0003DMG400028194 ID=PGSC0003DMT400072467.v4.03 annot-version=v4.03
Sequence

ATGGACCTGGACTTGGAGTTTAGTCTCTATCTTGGTAGTGAGAAGACTTCAAGCTCTAGA
AAGTGTGCTCACCCTGAGTCCAAAAAACTTGCCCAAGGTCTTGCAGTTGATCTGGAACTA
AGTCTCTCTAGTGGTGCTGCTGAATCTGATGTCACTACTGTGCCTTTGCTCTCCACTTCA
CCACAAAGTATCATCATGAAGGTGCCGCAGGCAATGGCTGGAGCTTTTCACACTGATGAA
GTATCAACAGCTATACATTGGAAGACTAGCAACATTTTCCATCCATTACGAACTCCTCAG
GAAACTGAGGCTAGTTACTTATTGAACCAGGCTGCAACACAAATCAAGCAAGCTACAGTC
TCCCCCGATCTGTCGTCAAGTATAATCACAAATTCAAATAGCTCTGTCACCTGTACTTCC
GGGTTAACAAAACAGCAGCAACAACAGCAGCGTAGCAGTAGTACTAAACAGTGTCAGTTC
AAGGGATGCGTAAAAGGAGAAAGAAGTGCTTCTGGCCTTTGCATTGCCCACGGTGGGGGC
CGCAGGTGTCAGAAACCAGGCTGCCACAAGGGAGCCGAGGGTCAAACTGCATTTTGCAAA
GCCCATGGAGGTGGTCGTCGGTGTGAATTCCTAGGTTGTACAAAGAGCGTGGAAGGACGC
ACCAACTTTTGCATTGCACATGGGGGTGGAAGCCGTTGTAGTCAAGAAGGATGCAGCCGT
GCTGCCAGAGGGAAATCTGGATTATGCATTTGGCATGGTGGGGGCAAGAGGGCTGCACCA
AAAGTGCAGAAGGACTCTCTGGCCTTTGCATTTCACATGGAGGTGGCCGGCGCTGTCAGA
AGCAATAAGGGGGCAGAGAGGAGCACAGCTTTCTGTAAGGGTCATGGTGGTGGGAAGAGA
TGTTCATTCCAAGGAAATGGGCTCTGCCCGAAGAGTGTTCATGGGGGCATACTCTTCTGC
GTGGCCCATGGTGGTGGCAAGAGGTGTGCTGTGCCAGAGTGTACCAGGAGTGCAAGGGGA
AGAACTGATTTTTGTGTACGCCATGGTGGTGGAAAAAGATGCAAAGTTGAAGGCTGTGGA
AAAAGTGCTCAGGGAAGCACCGATTTCTGCAAAGCCCACGGAGGAGGGAAGAGATGCTCT
TGGGGTCAGCCTGAGTCAGAATTTGGGCAAGGTGATGGTCCTTGTAACTCATTTGCTAGA
GGGAAGAATGGACTTTGTGCATCTCATGGTGCTCTCGTTCAAGACAAACGCGTTCATGGT
GGTGCCACTCTTGGGACTATGGTCCTGGATCTAGCGCCAAACCAGCTTGAGAAGATGAAG
GAGATGGTCAACGTGGAAGACATCTGTTTTGATGTCACAAAAATGCAGAGTAGTGGTATG
GCATCCGGCGATGACTCTCACATGAGATATCTTGGATTTAACCAACCCAATATTCCAGTC
GCAGGCAGCTCATCATCAGTTTCTGAAGGAAGGGTGCATGGAGGAGGTTTGATGGCATTG
CTAGCAGGTGGTTCTGGCCGTACCTCAAACAGCAGCAAGGGACCAGTTCCTGCATCTGAG
CCAGGGAGTTCTTACGTAGTCTCTAAGAACTGGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400049007
PEP Infomation

pacid=37479597 transcript=PGSC0003DMT400072467 locus=PGSC0003DMG400028194 ID=PGSC0003DMT400072467.v4.03 annot-version=v4.03
Sequence

MDLDLEFSLYLGSEKTSSSRKCAHPESKKLAQGLAVDLELSLSSGAAESDVTTVPLLSTS
PQSIIMKVPQAMAGAFHTDEVSTAIHWKTSNIFHPLRTPQETEASYLLNQAATQIKQATV
SPDLSSSIITNSNSSVTCTSGLTKQQQQQQRSSSTKQCQFKGCVKGERSASGLCIAHGGG
RRCQKPGCHKGAEGQTAFCKAHGGGRRCEFLGCTKSVEGRTNFCIAHGGGSRCSQEGCSR
AARGKSGLCIWHGGGKRAAPKVQKDSLAFAFHMEVAGAVRSNKGAERSTAFCKGHGGGKR
CSFQGNGLCPKSVHGGILFCVAHGGGKRCAVPECTRSARGRTDFCVRHGGGKRCKVEGCG
KSAQGSTDFCKAHGGGKRCSWGQPESEFGQGDGPCNSFARGKNGLCASHGALVQDKRVHG
GATLGTMVLDLAPNQLEKMKEMVNVEDICFDVTKMQSSGMASGDDSHMRYLGFNQPNIPV
AGSSSSVSEGRVHGGGLMALLAGGSGRTSNSSKGPVPASEPGSSYVVSKNWM*

Transcript Sequence

Transcript ID

PGSC0003DMT400072467
Transcript Infomation

pacid=37479597 locus=PGSC0003DMG400028194 ID=PGSC0003DMT400072467.v4.03 annot-version=v4.03
Sequence

ATGGACCTGGACTTGGAGTTTAGTCTCTATCTTGGTAGTGAGAAGACTTCAAGCTCTAGA
AAGTGTGCTCACCCTGAGTCCAAAAAACTTGCCCAAGGTCTTGCAGTTGATCTGGAACTA
AGTCTCTCTAGTGGTGCTGCTGAATCTGATGTCACTACTGTGCCTTTGCTCTCCACTTCA
CCACAAAGTATCATCATGAAGGTGCCGCAGGCAATGGCTGGAGCTTTTCACACTGATGAA
GTATCAACAGCTATACATTGGAAGACTAGCAACATTTTCCATCCATTACGAACTCCTCAG
GAAACTGAGGCTAGTTACTTATTGAACCAGGCTGCAACACAAATCAAGCAAGCTACAGTC
TCCCCCGATCTGTCGTCAAGTATAATCACAAATTCAAATAGCTCTGTCACCTGTACTTCC
GGGTTAACAAAACAGCAGCAACAACAGCAGCGTAGCAGTAGTACTAAACAGTGTCAGTTC
AAGGGATGCGTAAAAGGAGAAAGAAGTGCTTCTGGCCTTTGCATTGCCCACGGTGGGGGC
CGCAGGTGTCAGAAACCAGGCTGCCACAAGGGAGCCGAGGGTCAAACTGCATTTTGCAAA
GCCCATGGAGGTGGTCGTCGGTGTGAATTCCTAGGTTGTACAAAGAGCGTGGAAGGACGC
ACCAACTTTTGCATTGCACATGGGGGTGGAAGCCGTTGTAGTCAAGAAGGATGCAGCCGT
GCTGCCAGAGGGAAATCTGGATTATGCATTTGGCATGGTGGGGGCAAGAGGGCTGCACCA
AAAGTGCAGAAGGACTCTCTGGCCTTTGCATTTCACATGGAGGTGGCCGGCGCTGTCAGA
AGCAATAAGGGGGCAGAGAGGAGCACAGCTTTCTGTAAGGGTCATGGTGGTGGGAAGAGA
TGTTCATTCCAAGGAAATGGGCTCTGCCCGAAGAGTGTTCATGGGGGCATACTCTTCTGC
GTGGCCCATGGTGGTGGCAAGAGGTGTGCTGTGCCAGAGTGTACCAGGAGTGCAAGGGGA
AGAACTGATTTTTGTGTACGCCATGGTGGTGGAAAAAGATGCAAAGTTGAAGGCTGTGGA
AAAAGTGCTCAGGGAAGCACCGATTTCTGCAAAGCCCACGGAGGAGGGAAGAGATGCTCT
TGGGGTCAGCCTGAGTCAGAATTTGGGCAAGGTGATGGTCCTTGTAACTCATTTGCTAGA
GGGAAGAATGGACTTTGTGCATCTCATGGTGCTCTCGTTCAAGACAAACGCGTTCATGGT
GGTGCCACTCTTGGGACTATGGTCCTGGATCTAGCGCCAAACCAGCTTGAGAAGATGAAG
GAGATGGTCAACGTGGAAGACATCTGTTTTGATGTCACAAAAATGCAGAGTAGTGGTATG
GCATCCGGCGATGACTCTCACATGAGATATCTTGGATTTAACCAACCCAATATTCCAGTC
GCAGGCAGCTCATCATCAGTTTCTGAAGGAAGGGTGCATGGAGGAGGTTTGATGGCATTG
CTAGCAGGTGGTTCTGGCCGTACCTCAAACAGCAGCAAGGGACCAGTTCCTGCATCTGAG
CCAGGGAGTTCTTACGTAGTCTCTAAGAACTGGATGTAA