Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072449
CDS Infomation

pacid=37480324 polypeptide=PGSC0003DMP400048991 locus=PGSC0003DMG400028185 ID=PGSC0003DMT400072449.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGGAAAAGGAAAAAATCAAAGTTGAGAAGAAGAAGAATGACGCCGGAAAGAAG
TCGGCCGGCGGTGGGAAAAACGACGCCGGCGGCGGTATCGCTACTATTCTGTTAAAGTTA
GATTTGCATTGTGAAGGTTGTGCTCAAAAAGTTAGACGTTCTGTTCGTCACTTCGAAGGT
GTGGAAGACGTGAAGGCGGATGCCAGTAGTGGAAAATTGACGGTGGAAGGGAATGTGGAT
CCCTTATGGCTCCGGGAGAAGGTGGAAAGCAAGACTAAGAAGAAGGTGGCGCTCCTCTCT
GCTCAGCCCAAAAAAGTTGCCGCCGGCACCGGTGACGCCGGAGGAGAGAAAAAATCCGAT
GAGAAGGTTGAGAACAAGGCAGTAGAGGAGAAGGTTGAGAACAAAGTAGCAGAGGAGAAG
AAAGGGGAAGATAAAAAGCCCAAAAAGGTTCAATGTAACACAGAGGTAGTTCAGCAGCAT
TGTGACGGATCTGCACAAAAAGTAAAGCGATTTCTTATAAAGGAATTGAAACATAAATTG
AAACGTAATGTAGCTGTTGTTCCACCGAAGAAAGGTGATGGATCAGGTAACCGGTGTGAT
AACAAGAAGAACAAAGAAATTGCTCGTGGTCGTGGTAGTGGTGGTGGTGGTGATGGAAAA
AAGAAAGACGGTGCATCATCGTCTACAATGGCAAGTAAAAGCACAGAACCAAAAGAGCAA
AACACAGAGGTGATGAACAACAAAAAGGAATGTCACCATGGTGATTACAGTAATCCAAAT
ATGTACTACACAATGCCACCATCAATTTACAATCAAAATCATGTGAATCAAGATTATGGC
GCAACAATGCAGGATCATCATGGTTATTATGGTCATAGTGTTGGCTATATGCCACCACCA
CCATACCTAACTGCATCGCGCGATCATGGTTATGGATATAGAACTGGATATGTGTCACCA
CGACACTTTACTGCACCGCGTGATCACGATCATGATCATGGTTATGGTCATATTGGGTAT
GTACCACCACCATACTCTGCACCTCAATATTTCAGCGATGAAAATCCTAATGCTTGCTCC
GTCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400048991
PEP Infomation

pacid=37480324 transcript=PGSC0003DMT400072449 locus=PGSC0003DMG400028185 ID=PGSC0003DMT400072449.v4.03 annot-version=v4.03
Sequence

MGEEKEKIKVEKKKNDAGKKSAGGGKNDAGGGIATILLKLDLHCEGCAQKVRRSVRHFEG
VEDVKADASSGKLTVEGNVDPLWLREKVESKTKKKVALLSAQPKKVAAGTGDAGGEKKSD
EKVENKAVEEKVENKVAEEKKGEDKKPKKVQCNTEVVQQHCDGSAQKVKRFLIKELKHKL
KRNVAVVPPKKGDGSGNRCDNKKNKEIARGRGSGGGGDGKKKDGASSSTMASKSTEPKEQ
NTEVMNNKKECHHGDYSNPNMYYTMPPSIYNQNHVNQDYGATMQDHHGYYGHSVGYMPPP
PYLTASRDHGYGYRTGYVSPRHFTAPRDHDHDHGYGHIGYVPPPYSAPQYFSDENPNACS
VM*

Transcript Sequence

Transcript ID

PGSC0003DMT400072449
Transcript Infomation

pacid=37480324 locus=PGSC0003DMG400028185 ID=PGSC0003DMT400072449.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGGAAAAGGAAAAAATCAAAGTTGAGAAGAAGAAGAATGACGCCGGAAAGAAG
TCGGCCGGCGGTGGGAAAAACGACGCCGGCGGCGGTATCGCTACTATTCTGTTAAAGTTA
GATTTGCATTGTGAAGGTTGTGCTCAAAAAGTTAGACGTTCTGTTCGTCACTTCGAAGGT
GTGGAAGACGTGAAGGCGGATGCCAGTAGTGGAAAATTGACGGTGGAAGGGAATGTGGAT
CCCTTATGGCTCCGGGAGAAGGTGGAAAGCAAGACTAAGAAGAAGGTGGCGCTCCTCTCT
GCTCAGCCCAAAAAAGTTGCCGCCGGCACCGGTGACGCCGGAGGAGAGAAAAAATCCGAT
GAGAAGGTTGAGAACAAGGCAGTAGAGGAGAAGGTTGAGAACAAAGTAGCAGAGGAGAAG
AAAGGGGAAGATAAAAAGCCCAAAAAGGTTCAATGTAACACAGAGGTAGTTCAGCAGCAT
TGTGACGGATCTGCACAAAAAGTAAAGCGATTTCTTATAAAGGAATTGAAACATAAATTG
AAACGTAATGTAGCTGTTGTTCCACCGAAGAAAGGTGATGGATCAGGTAACCGGTGTGAT
AACAAGAAGAACAAAGAAATTGCTCGTGGTCGTGGTAGTGGTGGTGGTGGTGATGGAAAA
AAGAAAGACGGTGCATCATCGTCTACAATGGCAAGTAAAAGCACAGAACCAAAAGAGCAA
AACACAGAGGTGATGAACAACAAAAAGGAATGTCACCATGGTGATTACAGTAATCCAAAT
ATGTACTACACAATGCCACCATCAATTTACAATCAAAATCATGTGAATCAAGATTATGGC
GCAACAATGCAGGATCATCATGGTTATTATGGTCATAGTGTTGGCTATATGCCACCACCA
CCATACCTAACTGCATCGCGCGATCATGGTTATGGATATAGAACTGGATATGTGTCACCA
CGACACTTTACTGCACCGCGTGATCACGATCATGATCATGGTTATGGTCATATTGGGTAT
GTACCACCACCATACTCTGCACCTCAATATTTCAGCGATGAAAATCCTAATGCTTGCTCC
GTCATGTGA