Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072423
CDS Infomation

pacid=37477844 polypeptide=PGSC0003DMP400048973 locus=PGSC0003DMG400028180 ID=PGSC0003DMT400072423.v4.03 annot-version=v4.03
Sequence

ATGCCATTTTCGGTCACCATTTCTTCCTTCTCTCTTCTCACTAACCCCACCACCCACCCC
CACCACCGGACCACCGTTCTCCGCCCAAAAAACCCACTTCAAAATCGTTCACAACTCACC
ATTAAATCCTCCATTGACAACAAGAAACCACCTTCAACTAAACCCACTTCATGGGTCAGT
CCAGATTGGCTAACTAAACTTACCAGGTCACTTACTTTAGGCCAAAATGATGATTCTAAC
ATACCCATTGCGAGTGCTGAGCTTGATGATGTTTCTGAACTTTTGGGTGGTGCTCTTTTT
CTTCCATTGTTTAGATGGATGAATTTGTATGGACCTATTTATCGTCTTGCTGCTGGGCCG
AGGAATTTTGTTATTGTTAGTGATCCTGCTATTGCTAAGCATGTTTTGAAGAATTATGGA
AAGTATGGTAAAGGACTTGTTGCTGAGGTTTCTGAGTTTTTGTTTGGTTCTGGTTTTGCC
ATTGCAGAAGGTCCTCTTTGGACGGCAAGGCGAAGGGCAGTGGTTCCATCTCTTCACAAG
AAGTACTTGTCAGTAATAGTTGATCGGGTCTTTTGCAGATGTGCTGAGAGAATGGTGGAG
AAACTTTTACCTGATGCAATTTCTGGCTCTGCAGTGAATATGGAGGCAAAGTTTTCTCAA
CTAACACTTGATGTTATTGGTCTTGCACTCTTCAATTACAATTTTGATTCCCTTACTACT
GACAGTCCAGTTATTGATGCAGTATACACTGCATTAAAAGAAGCAGAACTCCGTTCAACT
GATCTGTTGCCATATTGGCAGATCAAAGCCTTATGTAAGTTCATCCCACGACAAATAAAG
GCTGAAAATGCAGTTTCACTAATCAGACAAACAGTTGAAGAGCTCATTGCAAAGTGCAGA
GAGATTGTAGAATCTGAGGGTGAGAGGATTAATGAAGATGAGTACGTGAATGATAGAGAT
CCAAGCATTCTTCGATTTTTGCTTGCTAGCCGTGAGGAGGTTTCAAGTGTACAACTTCGA
GATGATCTTCTATCAATGCTAGTTGCTGGGCATGAAACCACAGGTTCAGTTTTGACTTGG
ACGGCATACCTGCTGAGTAAGAATCCTTCCTCTTTGGAAAAAGCACATGAGGAAGTAGAT
AGAGTTTTGGGAGGACGCTCTCCAACCTATGAAGACATGAAGAATCTCAAGTTCTTAACG
CGGTGCATAACTGAGTCACTCAGACTCTATCCGCATCCACCTGTCCTGATAAGAAGAGCT
CAAGTAGCTGATGTCCTCCCCGGGAATTACAAAGTCAATGCTGGTCAAGATATAATGATT
TCGGTATATAACATTCATCATTCTTCAGAGGTATGGGATAGAGCTGAAGAATTTGATCCT
GAAAGATTCGACTTGGAAGGTCCCGTCCCAAATGAAACGAATACTGACTTTAGATTCATC
CCGTTTAGTGGAGGGCCACGAAAATGCGTTGGTGATCAATTTGCCTTGTTGGAAGCTACA
ATTACCCTCGCGATATTTGTACAGAACTTCTCGTTCGAGTTGATTCCAGATCAAACAATT
AGCATGACTACTGGAGCAACCATTCATACGACAAACGGTTTATACATGAAAGTGAAGCAA
AGGGAAAAAGTATCTGTTTTGGCTGCTGCACTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048973
PEP Infomation

pacid=37477844 transcript=PGSC0003DMT400072423 locus=PGSC0003DMG400028180 ID=PGSC0003DMT400072423.v4.03 annot-version=v4.03
Sequence

MPFSVTISSFSLLTNPTTHPHHRTTVLRPKNPLQNRSQLTIKSSIDNKKPPSTKPTSWVS
PDWLTKLTRSLTLGQNDDSNIPIASAELDDVSELLGGALFLPLFRWMNLYGPIYRLAAGP
RNFVIVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHK
KYLSVIVDRVFCRCAERMVEKLLPDAISGSAVNMEAKFSQLTLDVIGLALFNYNFDSLTT
DSPVIDAVYTALKEAELRSTDLLPYWQIKALCKFIPRQIKAENAVSLIRQTVEELIAKCR
EIVESEGERINEDEYVNDRDPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTW
TAYLLSKNPSSLEKAHEEVDRVLGGRSPTYEDMKNLKFLTRCITESLRLYPHPPVLIRRA
QVADVLPGNYKVNAGQDIMISVYNIHHSSEVWDRAEEFDPERFDLEGPVPNETNTDFRFI
PFSGGPRKCVGDQFALLEATITLAIFVQNFSFELIPDQTISMTTGATIHTTNGLYMKVKQ
REKVSVLAAAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400072423
Transcript Infomation

pacid=37477844 locus=PGSC0003DMG400028180 ID=PGSC0003DMT400072423.v4.03 annot-version=v4.03
Sequence

ATGCCATTTTCGGTCACCATTTCTTCCTTCTCTCTTCTCACTAACCCCACCACCCACCCC
CACCACCGGACCACCGTTCTCCGCCCAAAAAACCCACTTCAAAATCGTTCACAACTCACC
ATTAAATCCTCCATTGACAACAAGAAACCACCTTCAACTAAACCCACTTCATGGGTCAGT
CCAGATTGGCTAACTAAACTTACCAGGTCACTTACTTTAGGCCAAAATGATGATTCTAAC
ATACCCATTGCGAGTGCTGAGCTTGATGATGTTTCTGAACTTTTGGGTGGTGCTCTTTTT
CTTCCATTGTTTAGATGGATGAATTTGTATGGACCTATTTATCGTCTTGCTGCTGGGCCG
AGGAATTTTGTTATTGTTAGTGATCCTGCTATTGCTAAGCATGTTTTGAAGAATTATGGA
AAGTATGGTAAAGGACTTGTTGCTGAGGTTTCTGAGTTTTTGTTTGGTTCTGGTTTTGCC
ATTGCAGAAGGTCCTCTTTGGACGGCAAGGCGAAGGGCAGTGGTTCCATCTCTTCACAAG
AAGTACTTGTCAGTAATAGTTGATCGGGTCTTTTGCAGATGTGCTGAGAGAATGGTGGAG
AAACTTTTACCTGATGCAATTTCTGGCTCTGCAGTGAATATGGAGGCAAAGTTTTCTCAA
CTAACACTTGATGTTATTGGTCTTGCACTCTTCAATTACAATTTTGATTCCCTTACTACT
GACAGTCCAGTTATTGATGCAGTATACACTGCATTAAAAGAAGCAGAACTCCGTTCAACT
GATCTGTTGCCATATTGGCAGATCAAAGCCTTATGTAAGTTCATCCCACGACAAATAAAG
GCTGAAAATGCAGTTTCACTAATCAGACAAACAGTTGAAGAGCTCATTGCAAAGTGCAGA
GAGATTGTAGAATCTGAGGGTGAGAGGATTAATGAAGATGAGTACGTGAATGATAGAGAT
CCAAGCATTCTTCGATTTTTGCTTGCTAGCCGTGAGGAGGTTTCAAGTGTACAACTTCGA
GATGATCTTCTATCAATGCTAGTTGCTGGGCATGAAACCACAGGTTCAGTTTTGACTTGG
ACGGCATACCTGCTGAGTAAGAATCCTTCCTCTTTGGAAAAAGCACATGAGGAAGTAGAT
AGAGTTTTGGGAGGACGCTCTCCAACCTATGAAGACATGAAGAATCTCAAGTTCTTAACG
CGGTGCATAACTGAGTCACTCAGACTCTATCCGCATCCACCTGTCCTGATAAGAAGAGCT
CAAGTAGCTGATGTCCTCCCCGGGAATTACAAAGTCAATGCTGGTCAAGATATAATGATT
TCGGTATATAACATTCATCATTCTTCAGAGGTATGGGATAGAGCTGAAGAATTTGATCCT
GAAAGATTCGACTTGGAAGGTCCCGTCCCAAATGAAACGAATACTGACTTTAGATTCATC
CCGTTTAGTGGAGGGCCACGAAAATGCGTTGGTGATCAATTTGCCTTGTTGGAAGCTACA
ATTACCCTCGCGATATTTGTACAGAACTTCTCGTTCGAGTTGATTCCAGATCAAACAATT
AGCATGACTACTGGAGCAACCATTCATACGACAAACGGTTTATACATGAAAGTGAAGCAA
AGGGAAAAAGTATCTGTTTTGGCTGCTGCACTGTAA