Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072409
CDS Infomation

pacid=37479249 polypeptide=PGSC0003DMP400048959 locus=PGSC0003DMG400028176 ID=PGSC0003DMT400072409.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGAGAGAGGTGAGCTGATTTACAAAATTTACAGAGCCCTAAGTTATGGATTA
TCGCCGCTGATTCAGCTGCATCTGCGGTGGCGCAAGTTCCGTGGCCTGGAACATCCTCTC
CGCTGGCGCGAGCGTCTCGGACTCCCTTCTCTTTCTCGCCCCCCTGGCCCTCTCTTCTGG
TTCCACGCTGTCTCACTTGGTGAAGGAATGTGTGCAATTCCTGTGATCAAATGCTGCATA
GAGAGGAGGCCTGATGTAACTGTCTTGATGACCACAACCACCACATCAGCATTTGAGGTA
ATAAAGCACCAGCTTCCAAATAACGTCCTTTATCAGTTTTCTCCAGTTGACACTCCTGGC
GCCATTGATGCTTTCCTTCGTTATTGGAAGCCAAGTGCAATCATGTTAATGGAAAGTGAA
CTCTGGCCAAACCTGATTATAGGTGCTGCGAAAAATCGGATTGCACTTGCATTGCTTAAT
GCTCGAATATCTGCAAAATCTTATGGCAGTTGGTCTCAGCCATTTGTTAATTCTCTGACA
TCATTAATGCTCTCCAAATTCTTGCTGATTCTTCCACTGAGCACTACCCAGGCAATTCGC
TTTCAACTGCTGCAGTGTCCACCCTTCATCATAAATTTTTGCGGTGACCTAAAGTATGCT
GTAGGGAACATTGACACAAATGAAGGGGATCAAAGAGCGCTGAAAGAGTTGCAGGTACAG
CTTATGAACAGAAAGGTTTGGATGGCATCTTCTATTCATAAGGGTGAAGAAAAAGTCATG
TTAGGAGTACACAACGCTTTAAAGCAAATACATCCGGATATCATCACCATCATTGTGCCT
CGGCATCCTCAGCACGGAAAACAAATTGCTTTGGAATTGGAGAAAGATGGAGTAAGGGTA
GCATTACGGTCTCGTCACGATAAGCTCATGCCAGGGACAAACATATATGTGGTTGACACA
TTAGGTGAATTACAAAAGTTTTACAGACTAACACCAATTGCTGTGATTGGAGGTTCATTT
CTTCCAGGTTCAGCTGGTCATAATATTTCAGAAGCCGCTGCAGCAAGCTGTGCTATTTTA
ACTGGTCCTTATATCGGTCATTTCTCCCATATGGCAACACAGATGCAACGCTTGAATCCT
TTGTCAGTATTACAGGTTTCTGGACACATTCTTGTCGAAGCTCTCCACAACCTTCTTAGT
GATGCAAAACTTTTGGAAGAACGTCAAGAAGCTGCTAAGCAAGCTTATCATGCTCTGTCT
TGTGGGATCACTGAAAATGTTTGGAGCTTTCTAGACTTCCACATTTTTCGGATAGCACTG
GCAAACGAAGATTGTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400048959
PEP Infomation

pacid=37479249 transcript=PGSC0003DMT400072409 locus=PGSC0003DMG400028176 ID=PGSC0003DMT400072409.v4.03 annot-version=v4.03
Sequence

MAMERGELIYKIYRALSYGLSPLIQLHLRWRKFRGLEHPLRWRERLGLPSLSRPPGPLFW
FHAVSLGEGMCAIPVIKCCIERRPDVTVLMTTTTTSAFEVIKHQLPNNVLYQFSPVDTPG
AIDAFLRYWKPSAIMLMESELWPNLIIGAAKNRIALALLNARISAKSYGSWSQPFVNSLT
SLMLSKFLLILPLSTTQAIRFQLLQCPPFIINFCGDLKYAVGNIDTNEGDQRALKELQVQ
LMNRKVWMASSIHKGEEKVMLGVHNALKQIHPDIITIIVPRHPQHGKQIALELEKDGVRV
ALRSRHDKLMPGTNIYVVDTLGELQKFYRLTPIAVIGGSFLPGSAGHNISEAAAASCAIL
TGPYIGHFSHMATQMQRLNPLSVLQVSGHILVEALHNLLSDAKLLEERQEAAKQAYHALS
CGITENVWSFLDFHIFRIALANEDCP*

Transcript Sequence

Transcript ID

PGSC0003DMT400072409
Transcript Infomation

pacid=37479249 locus=PGSC0003DMG400028176 ID=PGSC0003DMT400072409.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGAGAGAGGTGAGCTGATTTACAAAATTTACAGAGCCCTAAGTTATGGATTA
TCGCCGCTGATTCAGCTGCATCTGCGGTGGCGCAAGTTCCGTGGCCTGGAACATCCTCTC
CGCTGGCGCGAGCGTCTCGGACTCCCTTCTCTTTCTCGCCCCCCTGGCCCTCTCTTCTGG
TTCCACGCTGTCTCACTTGGTGAAGGAATGTGTGCAATTCCTGTGATCAAATGCTGCATA
GAGAGGAGGCCTGATGTAACTGTCTTGATGACCACAACCACCACATCAGCATTTGAGGTA
ATAAAGCACCAGCTTCCAAATAACGTCCTTTATCAGTTTTCTCCAGTTGACACTCCTGGC
GCCATTGATGCTTTCCTTCGTTATTGGAAGCCAAGTGCAATCATGTTAATGGAAAGTGAA
CTCTGGCCAAACCTGATTATAGGTGCTGCGAAAAATCGGATTGCACTTGCATTGCTTAAT
GCTCGAATATCTGCAAAATCTTATGGCAGTTGGTCTCAGCCATTTGTTAATTCTCTGACA
TCATTAATGCTCTCCAAATTCTTGCTGATTCTTCCACTGAGCACTACCCAGGCAATTCGC
TTTCAACTGCTGCAGTGTCCACCCTTCATCATAAATTTTTGCGGTGACCTAAAGTATGCT
GTAGGGAACATTGACACAAATGAAGGGGATCAAAGAGCGCTGAAAGAGTTGCAGGTACAG
CTTATGAACAGAAAGGTTTGGATGGCATCTTCTATTCATAAGGGTGAAGAAAAAGTCATG
TTAGGAGTACACAACGCTTTAAAGCAAATACATCCGGATATCATCACCATCATTGTGCCT
CGGCATCCTCAGCACGGAAAACAAATTGCTTTGGAATTGGAGAAAGATGGAGTAAGGGTA
GCATTACGGTCTCGTCACGATAAGCTCATGCCAGGGACAAACATATATGTGGTTGACACA
TTAGGTGAATTACAAAAGTTTTACAGACTAACACCAATTGCTGTGATTGGAGGTTCATTT
CTTCCAGGTTCAGCTGGTCATAATATTTCAGAAGCCGCTGCAGCAAGCTGTGCTATTTTA
ACTGGTCCTTATATCGGTCATTTCTCCCATATGGCAACACAGATGCAACGCTTGAATCCT
TTGTCAGTATTACAGGTTTCTGGACACATTCTTGTCGAAGCTCTCCACAACCTTCTTAGT
GATGCAAAACTTTTGGAAGAACGTCAAGAAGCTGCTAAGCAAGCTTATCATGCTCTGTCT
TGTGGGATCACTGAAAATGTTTGGAGCTTTCTAGACTTCCACATTTTTCGGATAGCACTG
GCAAACGAAGATTGTCCTTAG