Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072379
CDS Infomation

pacid=37479062 polypeptide=PGSC0003DMP400048939 locus=PGSC0003DMG400028165 ID=PGSC0003DMT400072379.v4.03 annot-version=v4.03
Sequence

ATGTGCAGGTTGGATCTTGGAGATGGCAAAAAGGTTGAGCTCAAAGAATGTCCGAGATCT
AAGCTTCAGAAACAAAGTATCAAGTATCTTGGACCTCAAGAGAGAGAACATTATGAATAT
GTAGTGGCCGAAGGGAAAATACTTCATAGCCTAACTGGAAATCATCTTGATACAACCAAT
GGGTTGCCCGGGGCAAAATGGATTTTTGTAATGAGCACCTCAAAGAGACTCTATGCTGGC
GAGAAGAAGAAAGGAATATTTCATCATTCCAGCTTTCTTGCTGGTGGGGCTACTTTAGCT
GCTGGAAGACTAGTGGTAAAAGATGGGATACTTAAGTCTATTTCAGCATATAGTGGGCAT
TATCGGCCAACTGATGATAGCCTCGACAGCTTCTTATCATTTCTGAAGGAAAATGGAGTC
AACCTGGAAGAGACTGAGATAAAAAAGCCAAGAGATGATGATGAGAGCTATGAAGAGGGA
AATTCATCTGAGAGTCGCTCTGCGTCTGATCTTTCAACTATATCAGAATCCCTTCAAGTT
GATTTACAGAAGGAAGAGGAAAAAGACTTCTCCTCAAAATTAGTGATAAGTCCACAAGCT
GAAAAGGCAAGTAACTATAAGAGAACACTCTCGGGTGGTCTTGAGAGCCCGAGAGCTGAG
GTGCCAAAAACTGCAATACTGCAAAGGATTAATTCAAAGAAGTTATCAAAGTCATATCAA
CTGGGTCATCAACTCTCCCTGGCATGGTCAACAGGTGCAGGTCCAAGAATTGGATGCATT
AACGACTACCCGGTTGAACTAAGGGAACAGGCCTTAGAACTGACACACCTCTCACCAAGA
CCTCGTTCTGCATCATCAACTCCTAGGCCGATTGGTGCAATGGTGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400048939
PEP Infomation

pacid=37479062 transcript=PGSC0003DMT400072379 locus=PGSC0003DMG400028165 ID=PGSC0003DMT400072379.v4.03 annot-version=v4.03
Sequence

MCRLDLGDGKKVELKECPRSKLQKQSIKYLGPQEREHYEYVVAEGKILHSLTGNHLDTTN
GLPGAKWIFVMSTSKRLYAGEKKKGIFHHSSFLAGGATLAAGRLVVKDGILKSISAYSGH
YRPTDDSLDSFLSFLKENGVNLEETEIKKPRDDDESYEEGNSSESRSASDLSTISESLQV
DLQKEEEKDFSSKLVISPQAEKASNYKRTLSGGLESPRAEVPKTAILQRINSKKLSKSYQ
LGHQLSLAWSTGAGPRIGCINDYPVELREQALELTHLSPRPRSASSTPRPIGAMVM*

Transcript Sequence

Transcript ID

PGSC0003DMT400072379
Transcript Infomation

pacid=37479062 locus=PGSC0003DMG400028165 ID=PGSC0003DMT400072379.v4.03 annot-version=v4.03
Sequence

ATGTGCAGGTTGGATCTTGGAGATGGCAAAAAGGTTGAGCTCAAAGAATGTCCGAGATCT
AAGCTTCAGAAACAAAGTATCAAGTATCTTGGACCTCAAGAGAGAGAACATTATGAATAT
GTAGTGGCCGAAGGGAAAATACTTCATAGCCTAACTGGAAATCATCTTGATACAACCAAT
GGGTTGCCCGGGGCAAAATGGATTTTTGTAATGAGCACCTCAAAGAGACTCTATGCTGGC
GAGAAGAAGAAAGGAATATTTCATCATTCCAGCTTTCTTGCTGGTGGGGCTACTTTAGCT
GCTGGAAGACTAGTGGTAAAAGATGGGATACTTAAGTCTATTTCAGCATATAGTGGGCAT
TATCGGCCAACTGATGATAGCCTCGACAGCTTCTTATCATTTCTGAAGGAAAATGGAGTC
AACCTGGAAGAGACTGAGATAAAAAAGCCAAGAGATGATGATGAGAGCTATGAAGAGGGA
AATTCATCTGAGAGTCGCTCTGCGTCTGATCTTTCAACTATATCAGAATCCCTTCAAGTT
GATTTACAGAAGGAAGAGGAAAAAGACTTCTCCTCAAAATTAGTGATAAGTCCACAAGCT
GAAAAGGCAAGTAACTATAAGAGAACACTCTCGGGTGGTCTTGAGAGCCCGAGAGCTGAG
GTGCCAAAAACTGCAATACTGCAAAGGATTAATTCAAAGAAGTTATCAAAGTCATATCAA
CTGGGTCATCAACTCTCCCTGGCATGGTCAACAGGTGCAGGTCCAAGAATTGGATGCATT
AACGACTACCCGGTTGAACTAAGGGAACAGGCCTTAGAACTGACACACCTCTCACCAAGA
CCTCGTTCTGCATCATCAACTCCTAGGCCGATTGGTGCAATGGTGATGTAA