Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400072359
CDS Infomation

pacid=37480042 polypeptide=PGSC0003DMP400048920 locus=PGSC0003DMG400028160 ID=PGSC0003DMT400072359.v4.03 annot-version=v4.03
Sequence

ATGACTTCCTCACTCCATAGCCCACCAATCACCACCACCACCACCGTCACGGCGGAAGAC
GGCGGCGCAACCGGTTTTCCCGATTTGCATCCGTATATCATCGAAGCTCATATCCTCACT
CGACTCGACGGACCAACTCTAGCTTCCACCAGCTGTTCCTCTGCCACTCTCCACCGCCTT
TCATCAGAAAACCACCTATGGTCACGGGCATGCCACTCCACTTGGCCGTCTACCGCCACT
CCTCGTATCAGCCACGTCATCTCCACCTTCCCCGACGCCGGTCACCGTACCTTCTTCTCT
CAGTCCTTCTCTCTCCCTTCCTCCGAGAATAAGCAAATTCACGATTTAGAGTCAGTGAGT
TTGACGTCGCTGAGATCTACAATCTATATAATCCTTTCGAATTTTTTCTCCGTGTGTTTG
TTTGATCGGAATCGGAAACAGTGGATTATTCAACAGACAAATTCAATTGCAAACCGTTCA
TCTTCACCGCCGGAATTAATATCGGCCGTCGATATACACTACAAAAACAAAGCGATTTTC
AGTAACGTACAAGAGACTGAAACGACGTCGAGTTGGTTCCAATCCTCGCCGTTCAGAATC
GACATGATAGATCCAAAGGAGGTGATTTCAACGCCAATCAAACACCCGAGCGACGACGAC
ACGTGTACGGATCTGATTGAACACATGACGTTGAGTTGGATTCTGATTGATCCGATCGGC
CGGCGATCGATAAACCTCTCCTCCTTCAAGTCTGTTTCCGTACAACGGCACTGGTTAACC
GGTGAAGTGCAGGTACGTTTTACTTCAATCCTGACCGTTGATCAAAAGAGAGGTCACGTG
CAGTGTGAGATAGTGGTCACGTGCGGTGGATCTGAGGTAGGAGAAATGCAGGTGAGGGAA
GTGAGTTTGGGAGTGGAGGACATGGATGGAACTCATTTGAATGGGAGGGAGAGTTTGGTA
ATTTTACAAAAGGTATTGGAGGGTAAAAGGGGAAATGGAGCTAATAGAGGTGAAATAGGG
AGGAAGAGGTATAAAGAGTTTTTGGAAATGAGAAGGGAAAGAAAAGAGAAGAAGTTGAGG
AGAGAAGGGACATTAGATAGCTTATGTGTTGCATTTGGGATATCAATTTTTGTGGCTTTT
TGGTGTTTTCTATTTTGTTTGAGTAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400048920
PEP Infomation

pacid=37480042 transcript=PGSC0003DMT400072359 locus=PGSC0003DMG400028160 ID=PGSC0003DMT400072359.v4.03 annot-version=v4.03
Sequence

MTSSLHSPPITTTTTVTAEDGGATGFPDLHPYIIEAHILTRLDGPTLASTSCSSATLHRL
SSENHLWSRACHSTWPSTATPRISHVISTFPDAGHRTFFSQSFSLPSSENKQIHDLESVS
LTSLRSTIYIILSNFFSVCLFDRNRKQWIIQQTNSIANRSSSPPELISAVDIHYKNKAIF
SNVQETETTSSWFQSSPFRIDMIDPKEVISTPIKHPSDDDTCTDLIEHMTLSWILIDPIG
RRSINLSSFKSVSVQRHWLTGEVQVRFTSILTVDQKRGHVQCEIVVTCGGSEVGEMQVRE
VSLGVEDMDGTHLNGRESLVILQKVLEGKRGNGANRGEIGRKRYKEFLEMRRERKEKKLR
REGTLDSLCVAFGISIFVAFWCFLFCLSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400072359
Transcript Infomation

pacid=37480042 locus=PGSC0003DMG400028160 ID=PGSC0003DMT400072359.v4.03 annot-version=v4.03
Sequence

ATGACTTCCTCACTCCATAGCCCACCAATCACCACCACCACCACCGTCACGGCGGAAGAC
GGCGGCGCAACCGGTTTTCCCGATTTGCATCCGTATATCATCGAAGCTCATATCCTCACT
CGACTCGACGGACCAACTCTAGCTTCCACCAGCTGTTCCTCTGCCACTCTCCACCGCCTT
TCATCAGAAAACCACCTATGGTCACGGGCATGCCACTCCACTTGGCCGTCTACCGCCACT
CCTCGTATCAGCCACGTCATCTCCACCTTCCCCGACGCCGGTCACCGTACCTTCTTCTCT
CAGTCCTTCTCTCTCCCTTCCTCCGAGAATAAGCAAATTCACGATTTAGAGTCAGTGAGT
TTGACGTCGCTGAGATCTACAATCTATATAATCCTTTCGAATTTTTTCTCCGTGTGTTTG
TTTGATCGGAATCGGAAACAGTGGATTATTCAACAGACAAATTCAATTGCAAACCGTTCA
TCTTCACCGCCGGAATTAATATCGGCCGTCGATATACACTACAAAAACAAAGCGATTTTC
AGTAACGTACAAGAGACTGAAACGACGTCGAGTTGGTTCCAATCCTCGCCGTTCAGAATC
GACATGATAGATCCAAAGGAGGTGATTTCAACGCCAATCAAACACCCGAGCGACGACGAC
ACGTGTACGGATCTGATTGAACACATGACGTTGAGTTGGATTCTGATTGATCCGATCGGC
CGGCGATCGATAAACCTCTCCTCCTTCAAGTCTGTTTCCGTACAACGGCACTGGTTAACC
GGTGAAGTGCAGGTACGTTTTACTTCAATCCTGACCGTTGATCAAAAGAGAGGTCACGTG
CAGTGTGAGATAGTGGTCACGTGCGGTGGATCTGAGGTAGGAGAAATGCAGGTGAGGGAA
GTGAGTTTGGGAGTGGAGGACATGGATGGAACTCATTTGAATGGGAGGGAGAGTTTGGTA
ATTTTACAAAAGGTATTGGAGGGTAAAAGGGGAAATGGAGCTAATAGAGGTGAAATAGGG
AGGAAGAGGTATAAAGAGTTTTTGGAAATGAGAAGGGAAAGAAAAGAGAAGAAGTTGAGG
AGAGAAGGGACATTAGATAGCTTATGTGTTGCATTTGGGATATCAATTTTTGTGGCTTTT
TGGTGTTTTCTATTTTGTTTGAGTAGATAA